Miyakogusa Predicted Gene

Lj5g3v2113410.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2113410.1 Non Characterized Hit- tr|D8U3J1|D8U3J1_VOLCA
Putative uncharacterized protein (Fragment) OS=Volvox
,39.18,6e-18,DUF3611,Protein of unknown function DUF3611;
seg,NULL,CUFF.56722.1
         (289 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g107450.1 | TIC21 | HC | chr1:48749565-48746254 | 20130731      389   e-108
Medtr1g107450.2 | TIC21 | HC | chr1:48749565-48746254 | 20130731      389   e-108

>Medtr1g107450.1 | TIC21 | HC | chr1:48749565-48746254 | 20130731
          Length = 283

 Score =  389 bits (999), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/289 (74%), Positives = 226/289 (78%), Gaps = 6/289 (2%)

Query: 1   MQTLLLPAPCAGKFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MQTLL PAPC+GKFT                                             
Sbjct: 1   MQTLLSPAPCSGKFTAAPLSISAISVPRLPRTILKQNSTPSLPLKLNSSSPSFSSFIS-- 58

Query: 61  XXXXHRPRNLPFTVTASSQVSPAFTPSNGESEKAKLDQVAKRLEKTARYFKRLGSLGFWG 120
               HR   LPFT TASSQ SPAF PSN ESEKAKLDQVAKRLEKTAR+FKRLGSLGFWG
Sbjct: 59  ----HRSWKLPFTATASSQSSPAFAPSNEESEKAKLDQVAKRLEKTARHFKRLGSLGFWG 114

Query: 121 QLVCTVISAVILSFSVVVTGKVTSPATFYATAGGIVAGFISVFWSFGYIRLSEKLRKTAN 180
           QLVCT++SAVILSFSVVVTGKVTSPATFYATAGGI A FISVFWSFGYIRLSE+LR+TAN
Sbjct: 115 QLVCTIVSAVILSFSVVVTGKVTSPATFYATAGGIAAAFISVFWSFGYIRLSERLRRTAN 174

Query: 181 QPTKAPPRADVVKSLQNGIVVNLLGMGAAILGMQATVGLLVAKALTSAANPYYQGIAPGS 240
            PTKAPPR+DVVKSLQNGI +NLLGMG+AILGMQATVG LVAKALT++ANPYYQGIAPGS
Sbjct: 175 DPTKAPPRSDVVKSLQNGIALNLLGMGSAILGMQATVGFLVAKALTTSANPYYQGIAPGS 234

Query: 241 SPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPPSEALPFPKFA 289
           SPVLALDVFLVQASANTILSHFLGL+FSLELLRSVTLPPSEALPF KFA
Sbjct: 235 SPVLALDVFLVQASANTILSHFLGLLFSLELLRSVTLPPSEALPFLKFA 283


>Medtr1g107450.2 | TIC21 | HC | chr1:48749565-48746254 | 20130731
          Length = 283

 Score =  389 bits (999), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/289 (74%), Positives = 226/289 (78%), Gaps = 6/289 (2%)

Query: 1   MQTLLLPAPCAGKFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MQTLL PAPC+GKFT                                             
Sbjct: 1   MQTLLSPAPCSGKFTAAPLSISAISVPRLPRTILKQNSTPSLPLKLNSSSPSFSSFIS-- 58

Query: 61  XXXXHRPRNLPFTVTASSQVSPAFTPSNGESEKAKLDQVAKRLEKTARYFKRLGSLGFWG 120
               HR   LPFT TASSQ SPAF PSN ESEKAKLDQVAKRLEKTAR+FKRLGSLGFWG
Sbjct: 59  ----HRSWKLPFTATASSQSSPAFAPSNEESEKAKLDQVAKRLEKTARHFKRLGSLGFWG 114

Query: 121 QLVCTVISAVILSFSVVVTGKVTSPATFYATAGGIVAGFISVFWSFGYIRLSEKLRKTAN 180
           QLVCT++SAVILSFSVVVTGKVTSPATFYATAGGI A FISVFWSFGYIRLSE+LR+TAN
Sbjct: 115 QLVCTIVSAVILSFSVVVTGKVTSPATFYATAGGIAAAFISVFWSFGYIRLSERLRRTAN 174

Query: 181 QPTKAPPRADVVKSLQNGIVVNLLGMGAAILGMQATVGLLVAKALTSAANPYYQGIAPGS 240
            PTKAPPR+DVVKSLQNGI +NLLGMG+AILGMQATVG LVAKALT++ANPYYQGIAPGS
Sbjct: 175 DPTKAPPRSDVVKSLQNGIALNLLGMGSAILGMQATVGFLVAKALTTSANPYYQGIAPGS 234

Query: 241 SPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPPSEALPFPKFA 289
           SPVLALDVFLVQASANTILSHFLGL+FSLELLRSVTLPPSEALPF KFA
Sbjct: 235 SPVLALDVFLVQASANTILSHFLGLLFSLELLRSVTLPPSEALPFLKFA 283