Miyakogusa Predicted Gene

Lj5g3v2113390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2113390.1 Non Characterized Hit- tr|I3SCZ8|I3SCZ8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.62,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,UNC-50;
UNC-50,UNC-50,CUFF.56718.1
         (252 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g107430.1 | UNC-50 family protein | HC | chr1:48728970-487...   451   e-127
Medtr1g107430.2 | UNC-50 family protein | HC | chr1:48728882-487...   306   2e-83

>Medtr1g107430.1 | UNC-50 family protein | HC |
           chr1:48728970-48724362 | 20130731
          Length = 257

 Score =  451 bits (1161), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/257 (86%), Positives = 232/257 (90%), Gaps = 5/257 (1%)

Query: 1   MLPTASKGRASSSTS-----RPNSTLLPYLRRIIKWQQMDIEYTFWQMFHLCTAPKVVYQ 55
           MLPT SKGR+SSS+S     RPNSTLLPYLRRIIKWQQMD+EYTFWQM HLCT+PKVVYQ
Sbjct: 1   MLPTVSKGRSSSSSSSSSSSRPNSTLLPYLRRIIKWQQMDVEYTFWQMLHLCTSPKVVYQ 60

Query: 56  HTKYHKQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSIAHAXXXXXXXXXXXXXXT 115
           HTKYHKQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHS  HA              T
Sbjct: 61  HTKYHKQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSSGHALFVVFSVLLFHFLLT 120

Query: 116 GVFLATFCWFLTNSYLREEAPNSYVVEQRVEWMYAFDVHCNSFFPMFVLLYVIHYFLSPL 175
           G+FLATFCWFLTNSYLREEAPNSYVVEQRVEWMYAFDVHCNSFFPMFVLLYVIHYFLSPL
Sbjct: 121 GIFLATFCWFLTNSYLREEAPNSYVVEQRVEWMYAFDVHCNSFFPMFVLLYVIHYFLSPL 180

Query: 176 LVAHGFIPTLLSNILVMVGASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILS 235
           LVAHGFIP LLSN+L MVGASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILS
Sbjct: 181 LVAHGFIPELLSNLLFMVGASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILS 240

Query: 236 GFNPSRYFLSVYFSRQI 252
           GFNPSRYF+++YFSRQI
Sbjct: 241 GFNPSRYFMNIYFSRQI 257


>Medtr1g107430.2 | UNC-50 family protein | HC |
           chr1:48728882-48724529 | 20130731
          Length = 189

 Score =  306 bits (783), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 150/174 (86%), Positives = 156/174 (89%)

Query: 79  SLLLAVATLAYCAAYDHSIAHAXXXXXXXXXXXXXXTGVFLATFCWFLTNSYLREEAPNS 138
           +LLLAVATLAYCAAYDHS  HA              TG+FLATFCWFLTNSYLREEAPNS
Sbjct: 16  TLLLAVATLAYCAAYDHSSGHALFVVFSVLLFHFLLTGIFLATFCWFLTNSYLREEAPNS 75

Query: 139 YVVEQRVEWMYAFDVHCNSFFPMFVLLYVIHYFLSPLLVAHGFIPTLLSNILVMVGASYY 198
           YVVEQRVEWMYAFDVHCNSFFPMFVLLYVIHYFLSPLLVAHGFIP LLSN+L MVGASYY
Sbjct: 76  YVVEQRVEWMYAFDVHCNSFFPMFVLLYVIHYFLSPLLVAHGFIPELLSNLLFMVGASYY 135

Query: 199 HYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFLSVYFSRQI 252
           HYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYF+++YFSRQI
Sbjct: 136 HYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNIYFSRQI 189