Miyakogusa Predicted Gene

Lj5g3v2112080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2112080.1 tr|K1QTB5|K1QTB5_CRAGI TIP41-like protein
OS=Crassostrea gigas PE=4 SV=1,38.14,0.0000000003,TIP41,TIP41-like
protein; PUTATIVE CYTOSKELETAL PROTEIN,NULL; GAF/PUTATIVE CYTOSKELETAL
PROTEIN,NULL,CUFF.56699.1
         (290 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g107045.1 | type 2A phosphatase activator TIP41, putative ...   486   e-138
Medtr1g107045.2 | type 2A phosphatase activator TIP41, putative ...   435   e-122
Medtr1g107045.3 | type 2A phosphatase activator TIP41, putative ...   353   1e-97

>Medtr1g107045.1 | type 2A phosphatase activator TIP41, putative |
           HC | chr1:48455284-48458968 | 20130731
          Length = 288

 Score =  486 bits (1251), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 229/287 (79%), Positives = 253/287 (88%)

Query: 1   MEFAVDENDLKAAGAELFEDGGRKGVRIHGWLIESRRHSILTSSNVEEWEQKLHTSHLPE 60
           ME  VDENDL AAGAE+F +GGRKG+RIHGWLIESR +SIL SS V+EWE+KL TSHLPE
Sbjct: 1   MELEVDENDLNAAGAEVFANGGRKGIRIHGWLIESRTNSILNSSTVQEWEKKLETSHLPE 60

Query: 61  MVFGENTLILKHLSSGTKIHFNAFDALRGWKQXXXXXXXXXXXXQWKFRCKPSEQVILDY 120
           MVFGENTLILKHL+SGTKIHF AFDAL GWKQ            +WKFR KP E+VILDY
Sbjct: 61  MVFGENTLILKHLNSGTKIHFKAFDALCGWKQEALPPVEVPAAAKWKFRSKPFEEVILDY 120

Query: 121 DYTFTTPYCGSGTIEIDKDLNASEISEETSNLHWEDCKEQIDLVSLASKEPILFYDEVVL 180
           DYTFTTPYCGSG IEI+K+LN ++ISEET NLHWEDCKE+IDLV+LASKEPILFYDEVVL
Sbjct: 121 DYTFTTPYCGSGAIEIEKELNGTKISEETGNLHWEDCKEEIDLVALASKEPILFYDEVVL 180

Query: 181 YEDELADNGVSLLTVKVRVMPSSWFLLLRFWLRVDGVLIRLRDTRMHCVFGGSTNPVILR 240
           YEDELADNGVSLLTVKVRVMPSSWFLLL+FWLRVDGVLIRLR+TRMHC+F GSTNPV+LR
Sbjct: 181 YEDELADNGVSLLTVKVRVMPSSWFLLLQFWLRVDGVLIRLRETRMHCIFAGSTNPVVLR 240

Query: 241 ESCWRESTFQALSAKGTPFDPAVYNDPSIISQRLPIVKQMTQNLVIS 287
           ESCWRE+TFQAL+A G PFD A YNDPSIISQ+LP+VK+ TQ LVIS
Sbjct: 241 ESCWREATFQALAANGHPFDSAAYNDPSIISQKLPVVKRTTQKLVIS 287


>Medtr1g107045.2 | type 2A phosphatase activator TIP41, putative |
           HC | chr1:48455602-48458965 | 20130731
          Length = 269

 Score =  435 bits (1118), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 205/254 (80%), Positives = 226/254 (88%)

Query: 1   MEFAVDENDLKAAGAELFEDGGRKGVRIHGWLIESRRHSILTSSNVEEWEQKLHTSHLPE 60
           ME  VDENDL AAGAE+F +GGRKG+RIHGWLIESR +SIL SS V+EWE+KL TSHLPE
Sbjct: 1   MELEVDENDLNAAGAEVFANGGRKGIRIHGWLIESRTNSILNSSTVQEWEKKLETSHLPE 60

Query: 61  MVFGENTLILKHLSSGTKIHFNAFDALRGWKQXXXXXXXXXXXXQWKFRCKPSEQVILDY 120
           MVFGENTLILKHL+SGTKIHF AFDAL GWKQ            +WKFR KP E+VILDY
Sbjct: 61  MVFGENTLILKHLNSGTKIHFKAFDALCGWKQEALPPVEVPAAAKWKFRSKPFEEVILDY 120

Query: 121 DYTFTTPYCGSGTIEIDKDLNASEISEETSNLHWEDCKEQIDLVSLASKEPILFYDEVVL 180
           DYTFTTPYCGSG IEI+K+LN ++ISEET NLHWEDCKE+IDLV+LASKEPILFYDEVVL
Sbjct: 121 DYTFTTPYCGSGAIEIEKELNGTKISEETGNLHWEDCKEEIDLVALASKEPILFYDEVVL 180

Query: 181 YEDELADNGVSLLTVKVRVMPSSWFLLLRFWLRVDGVLIRLRDTRMHCVFGGSTNPVILR 240
           YEDELADNGVSLLTVKVRVMPSSWFLLL+FWLRVDGVLIRLR+TRMHC+F GSTNPV+LR
Sbjct: 181 YEDELADNGVSLLTVKVRVMPSSWFLLLQFWLRVDGVLIRLRETRMHCIFAGSTNPVVLR 240

Query: 241 ESCWRESTFQALSA 254
           ESCWRE+TFQAL+A
Sbjct: 241 ESCWREATFQALAA 254


>Medtr1g107045.3 | type 2A phosphatase activator TIP41, putative |
           HC | chr1:48455656-48458965 | 20130731
          Length = 230

 Score =  353 bits (906), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 168/212 (79%), Positives = 185/212 (87%)

Query: 1   MEFAVDENDLKAAGAELFEDGGRKGVRIHGWLIESRRHSILTSSNVEEWEQKLHTSHLPE 60
           ME  VDENDL AAGAE+F +GGRKG+RIHGWLIESR +SIL SS V+EWE+KL TSHLPE
Sbjct: 1   MELEVDENDLNAAGAEVFANGGRKGIRIHGWLIESRTNSILNSSTVQEWEKKLETSHLPE 60

Query: 61  MVFGENTLILKHLSSGTKIHFNAFDALRGWKQXXXXXXXXXXXXQWKFRCKPSEQVILDY 120
           MVFGENTLILKHL+SGTKIHF AFDAL GWKQ            +WKFR KP E+VILDY
Sbjct: 61  MVFGENTLILKHLNSGTKIHFKAFDALCGWKQEALPPVEVPAAAKWKFRSKPFEEVILDY 120

Query: 121 DYTFTTPYCGSGTIEIDKDLNASEISEETSNLHWEDCKEQIDLVSLASKEPILFYDEVVL 180
           DYTFTTPYCGSG IEI+K+LN ++ISEET NLHWEDCKE+IDLV+LASKEPILFYDEVVL
Sbjct: 121 DYTFTTPYCGSGAIEIEKELNGTKISEETGNLHWEDCKEEIDLVALASKEPILFYDEVVL 180

Query: 181 YEDELADNGVSLLTVKVRVMPSSWFLLLRFWL 212
           YEDELADNGVSLLTVKVRVMPSSWFLLL+FW+
Sbjct: 181 YEDELADNGVSLLTVKVRVMPSSWFLLLQFWV 212