Miyakogusa Predicted Gene

Lj5g3v2112060.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2112060.1 Non Characterized Hit- tr|F6H0B1|F6H0B1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.83,1e-18,coiled-coil,NULL; seg,NULL; DUF760,Protein of unknown
function DUF760,CUFF.56696.1
         (378 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g008890.1 | Hop-interacting protein THI043 | HC | chr6:249...   176   3e-44
Medtr4g071610.1 | Hop-interacting protein THI043 | HC | chr4:270...   176   3e-44
Medtr3g115240.1 | DUF760 family protein | HC | chr3:53877908-538...    98   1e-20

>Medtr6g008890.1 | Hop-interacting protein THI043 | HC |
           chr6:2492614-2497579 | 20130731
          Length = 356

 Score =  176 bits (446), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/337 (35%), Positives = 182/337 (54%), Gaps = 34/337 (10%)

Query: 41  KPPFLVLASSTPSFGDFTSKPKKS-------VLRELIQEIEPLDVSHIQKDVPPTTADAM 93
           + PFL   S     GD     +KS       V+ ++++ I+PLD S I K V   + D+M
Sbjct: 41  RRPFLFATSCHHVDGDDVVSTRKSTFNRGFTVISKMLRRIKPLDNSVISKGVSEASKDSM 100

Query: 94  KRTISGMLGLLPSDQFHVVIEALWEPLSKLLISSMMTGYTLRNAEYRLCLEKNLDMCE-- 151
           K+TIS MLGLLPSD F V +    +PL +LL+SS++TGYTL NAEYR+ L +NL+M    
Sbjct: 101 KQTISTMLGLLPSDHFDVTVSFEIQPLHRLLVSSIITGYTLWNAEYRMSLTRNLEMSHAD 160

Query: 152 --RDLEKPKAESTPMDLQGLLHDSVNVI-DFGRKSNLSSKVEKVHEDVDIQDLGEISSEA 208
              D E P         +    ++  V+ D G  ++     E           G++  +A
Sbjct: 161 QGADCETPLESLELKGGEEEHGETEKVVSDLGLANS-----EICSSSTGAGVFGDLPPQA 215

Query: 209 QQYILNLQSRLSSMKKELHEVKRKNAALQMQQFVGEEKNDLLDYLRSLQPEQVAQLSEFT 268
            +YI  LQS L++MK+EL+  K++   L+  + +   +N+LL+YLRS  P+ V ++S  +
Sbjct: 216 LKYIQQLQSELTNMKEELNAQKQEMMQLEHDRGI---RNNLLEYLRSFDPDMVTEMSRPS 272

Query: 269 SPELKEIIISVVHGLLATLSPKMHSKPSTMSENATIGTANAGSEDCAEVVENSSIQFHPV 328
           S E+++II  +V  +L      +    S   E +  G  + G E            F   
Sbjct: 273 SEEVEDIIHQLVQNILRRF--LVDEASSNFMEQSVEGNIDDGDE------------FSDK 318

Query: 329 ISLTRDYLARLLFWCMLLGHYLRGLEYRVDLTELLSL 365
           I+ +RDYLA+LLFWCMLLGH+LRGLE R+ L+ ++ L
Sbjct: 319 IATSRDYLAKLLFWCMLLGHHLRGLENRLHLSCVVGL 355


>Medtr4g071610.1 | Hop-interacting protein THI043 | HC |
           chr4:27095155-27100168 | 20130731
          Length = 356

 Score =  176 bits (446), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/337 (35%), Positives = 182/337 (54%), Gaps = 34/337 (10%)

Query: 41  KPPFLVLASSTPSFGDFTSKPKKS-------VLRELIQEIEPLDVSHIQKDVPPTTADAM 93
           + PFL   S     GD     +KS       V+ ++++ I+PLD S I K V   + D+M
Sbjct: 41  RRPFLFATSCHHVDGDDVVSTRKSTFNRGFTVISKMLRRIKPLDNSVISKGVSEASKDSM 100

Query: 94  KRTISGMLGLLPSDQFHVVIEALWEPLSKLLISSMMTGYTLRNAEYRLCLEKNLDMCE-- 151
           K+TIS MLGLLPSD F V +    +PL +LL+SS++TGYTL NAEYR+ L +NL+M    
Sbjct: 101 KQTISTMLGLLPSDHFDVTVSFEIQPLHRLLVSSIITGYTLWNAEYRMSLTRNLEMSHAD 160

Query: 152 --RDLEKPKAESTPMDLQGLLHDSVNVI-DFGRKSNLSSKVEKVHEDVDIQDLGEISSEA 208
              D E P         +    ++  V+ D G  ++     E           G++  +A
Sbjct: 161 QGADCETPLESLELKGGEEEHGETEKVVSDLGLANS-----EICSSSTGAGVFGDLPPQA 215

Query: 209 QQYILNLQSRLSSMKKELHEVKRKNAALQMQQFVGEEKNDLLDYLRSLQPEQVAQLSEFT 268
            +YI  LQS L++MK+EL+  K++   L+  + +   +N+LL+YLRS  P+ V ++S  +
Sbjct: 216 LKYIQQLQSELTNMKEELNAQKQEMMQLEHDRGI---RNNLLEYLRSFDPDMVTEMSRPS 272

Query: 269 SPELKEIIISVVHGLLATLSPKMHSKPSTMSENATIGTANAGSEDCAEVVENSSIQFHPV 328
           S E+++II  +V  +L      +    S   E +  G  + G E            F   
Sbjct: 273 SEEVEDIIHQLVQNILRRF--LVDEASSNFMEQSVEGNIDDGDE------------FSDK 318

Query: 329 ISLTRDYLARLLFWCMLLGHYLRGLEYRVDLTELLSL 365
           I+ +RDYLA+LLFWCMLLGH+LRGLE R+ L+ ++ L
Sbjct: 319 IATSRDYLAKLLFWCMLLGHHLRGLENRLHLSCVVGL 355


>Medtr3g115240.1 | DUF760 family protein | HC |
           chr3:53877908-53882290 | 20130731
          Length = 333

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 152/311 (48%), Gaps = 66/311 (21%)

Query: 59  SKPKKSVLRELIQEIEPLDVSHIQKDVPPTTADAMKRTISGMLGLLPSDQFHVVIEALWE 118
           SK ++ +L E ++ ++P  +    K  PP   DAM++T++ M+G LP   F + I  + E
Sbjct: 76  SKSRREILLEYVKTVQPEFMELFVKRAPPPVVDAMRQTVTNMIGTLPPQFFSITIATVAE 135

Query: 119 PLSKLLISSMMTGYTLRNAEYRLCLEKNLDMCERDLEKPKAESTPMDLQGLLHDSVNVID 178
            L++L+ S MMTGY  RNA+YRL L+++L+            + P D+Q    D  ++ D
Sbjct: 136 NLAQLMYSVMMTGYMFRNAQYRLELQESLEQV----------ALP-DVQ----DKKDIPD 180

Query: 179 F--GRKSNLSSKVEKVHEDVDIQDLGEISSEAQQYILNLQSRLSSMKKELHEVKRKNAAL 236
           +  G + N+S +V + +   +I   G    +A++YI  L++ +  + ++   V R+++  
Sbjct: 181 YAPGTQKNVSGEVIRWN---NIS--GPERMDAKKYIEILEAEIEELNRQ---VGRQSSNA 232

Query: 237 QMQQFVGEEKNDLLDYLRSLQPEQVAQLSEFTSPELKEIIISVVHGLLATLSPKMHSKPS 296
           Q         N+LL+YL+SL+P  +  L+     ++   + + +  LLA   P       
Sbjct: 233 Q---------NELLEYLKSLEPRNLKDLTSSAGEDVVLAMNTFIKRLLAVADP------- 276

Query: 297 TMSENATIGTANAGSEDCAEVVENSSIQFHPVISLTRDYLARLLFWCMLLGHYLRGLEYR 356
             ++  T  T  + SE                       L +LL+W M++G+ +R +E R
Sbjct: 277 --TQMKTSVTETSASE-----------------------LGKLLYWLMVVGYSIRNIEVR 311

Query: 357 VDLTELLSLTS 367
            D+  +L  T+
Sbjct: 312 YDMERVLGTTA 322