Miyakogusa Predicted Gene

Lj5g3v2112040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2112040.1 Non Characterized Hit- tr|B7FMC0|B7FMC0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,88.26,0,Thioredoxin,Thioredoxin domain; coiled-coil,NULL; seg,NULL;
Thioredoxin-like,Thioredoxin-like fold; ,CUFF.56695.1
         (213 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g106955.1 | thioredoxin-like/ATP-binding protein | HC | ch...   355   1e-98
Medtr8g076890.1 | thioredoxin-like/ATP-binding protein | HC | ch...   119   2e-27
Medtr7g009070.1 | thioredoxin H2-like protein | HC | chr7:193599...    50   1e-06

>Medtr1g106955.1 | thioredoxin-like/ATP-binding protein | HC |
           chr1:48412047-48413783 | 20130731
          Length = 213

 Score =  355 bits (912), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 174/213 (81%), Positives = 186/213 (87%)

Query: 1   MDKGKIQEVIEKQVLTVVQAVEDKIDDEISAXXXXXXXXXXXXXXXXXHQMKKMAEKRNR 60
           MD+GKIQEVIE QVLTV QAVEDKID+EI+A                  QMKKMAEKR+R
Sbjct: 1   MDRGKIQEVIENQVLTVAQAVEDKIDEEIAALERLDDDDLEALRERRLQQMKKMAEKRSR 60

Query: 61  WISLGHGDYSELPSEKDFFSVVKASDRVVCHFFRENWPCKVADKHLGVLAKQHIETRFVK 120
           WISLGHGDY+E+PSEKDFFSVVKAS+RVVCHFFRENWPCKV DKHL +LAKQHIETRFVK
Sbjct: 61  WISLGHGDYTEIPSEKDFFSVVKASERVVCHFFRENWPCKVVDKHLSILAKQHIETRFVK 120

Query: 121 INAEKSPFLAEKLKITVLPTLALIKNAKVDDYVVGFDELGGTDDFSTEDLEERLAKAQVI 180
           INAEKSPFLAEKLKI VLPT+ALIKN KVDDYVVGFDELGGTDDFSTE LEERLAKAQVI
Sbjct: 121 INAEKSPFLAEKLKIIVLPTIALIKNTKVDDYVVGFDELGGTDDFSTEVLEERLAKAQVI 180

Query: 181 FLEGESSIHQARSTAQSKRSVRQATRADSSDSE 213
           FLEGESSIH+ARS AQ+KRSVRQ+T ADSSDSE
Sbjct: 181 FLEGESSIHRARSGAQTKRSVRQSTTADSSDSE 213


>Medtr8g076890.1 | thioredoxin-like/ATP-binding protein | HC |
           chr8:32625594-32621103 | 20130731
          Length = 294

 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 83/131 (63%), Gaps = 2/131 (1%)

Query: 51  MKKMAEKRNRWISLGHGDYSELPSEKDFFSVVKASDRVVCHFF-RENWPCKVADKHLGVL 109
            KK AEKR  W   GHG++ E+ +E DF   V  S++V+CHF+ +E + CK+ DKHL  L
Sbjct: 131 FKKEAEKREAWKKKGHGEFREV-TEGDFLGEVTGSEKVICHFYHKEFYRCKIMDKHLKSL 189

Query: 110 AKQHIETRFVKINAEKSPFLAEKLKITVLPTLALIKNAKVDDYVVGFDELGGTDDFSTED 169
           + +HI+T+F++++AE +PF   KL I  LP + L +     D +VGF +LG  DDFST  
Sbjct: 190 STKHIDTKFIRLDAENAPFFVAKLAIKTLPCVILFRQGVAVDRLVGFQDLGAKDDFSTRA 249

Query: 170 LEERLAKAQVI 180
           LE  L K  +I
Sbjct: 250 LEVLLIKKGII 260


>Medtr7g009070.1 | thioredoxin H2-like protein | HC |
           chr7:1935999-1934401 | 20130731
          Length = 134

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)

Query: 79  FSVVKASDRVVCHFFRENW--PCKVADKHLGVLAKQHIETRFVKINAEKSPFLAEKLKIT 136
           F+ +K S R+V   F   W  PCK+ +  L  +A +  +  F+KI+ ++   +A++ K+ 
Sbjct: 41  FNELKDSPRLVVIDFSATWCGPCKMMEPILQAMANEFTDVEFIKIDVDELSDVAQEFKVQ 100

Query: 137 VLPTLALIKNAKVDDYVVG 155
            +PT  L+KN K  D VVG
Sbjct: 101 AMPTFLLLKNGKEVDKVVG 119