Miyakogusa Predicted Gene

Lj5g3v2065200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2065200.1 Non Characterized Hit- tr|E1ZGD0|E1ZGD0_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,24.74,5e-18,seg,NULL; F-box domain,F-box domain, cyclin-like;
A Receptor for Ubiquitination Targets,F-box domain,CUFF.56628.1
         (465 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g106020.1 | F-box SKIP22-like protein | HC | chr1:47945673...   468   e-132
Medtr7g057330.1 | F-box SKIP22-like protein | HC | chr7:20599792...   287   1e-77
Medtr4g019560.1 | F-box SKIP22-like protein | HC | chr4:6133484-...   285   8e-77

>Medtr1g106020.1 | F-box SKIP22-like protein | HC |
           chr1:47945673-47943707 | 20130731
          Length = 462

 Score =  468 bits (1204), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 266/482 (55%), Positives = 316/482 (65%), Gaps = 40/482 (8%)

Query: 1   MKLRLRSLESKETHKIEVPDPCSLHLLKTIVXXXXXXXXXXXXXXXXNRKDEIHASSPDD 60
           MKLRLRSLESKET KIEVPD CS   LK  +                NRKDEI+ +SP D
Sbjct: 1   MKLRLRSLESKETLKIEVPDSCSSQQLKFTISQTIPSSSSSSIHLSLNRKDEINVASPSD 60

Query: 61  SLQSIGIAAGDLVFYTLHPNSLSR-ETLPHKPTPQPEVSDSPDRPMIQSSSEINARDAKS 119
           SL SIGIA+GDL+FYT +PN+ S  ETLPHKP  QP         +IQ+S EI   D KS
Sbjct: 61  SLHSIGIASGDLIFYTFNPNAFSHNETLPHKPNNQP---------IIQNSPEITPIDEKS 111

Query: 120 PSLDVTEPETMEIDDGSDEAVVGYGWG---NYQPLFVKSVLREAAIGDDASDFKLLILAV 176
           P+L+  E    E+ DGSDEA          N +P FVK V++EA +GDD SD KLL+ AV
Sbjct: 112 PTLNTPEVNDTEMVDGSDEAATAMTMAVKNNPEPDFVKRVIKEA-LGDDVSDLKLLVFAV 170

Query: 177 HAVILESGFIRVDQVSGMAVNCSHLLDDFPSGSSP---------VKSLRYTLPEILTKGS 227
           HAVILESGF+RVD+VSGMA++CS+L+DD  S SS          + SLRYTLPEILT GS
Sbjct: 171 HAVILESGFVRVDEVSGMAISCSNLVDDMSSSSSSSSSSSSSSSMISLRYTLPEILTNGS 230

Query: 228 SESVSLKIQTLGHIVNVCGSLSNDNGSRLHMVYLDRNKFAPPLDFLLANSESKVGDDESG 287
           S +V LKIQTLG+ VNV GSL +D GSR+H VYLD+++FA PL+ +L NSE     ++ G
Sbjct: 231 SHAVILKIQTLGNFVNVYGSLCDDAGSRVHRVYLDKSRFAKPLELMLENSEFNGNFNDVG 290

Query: 288 NREKVFELWKMVKDGLASPLLIDLCEKSGLDLPPCFMRLPTDLKLIIMENLPGVDLAKVA 347
             +KVFELWK+VKDGLA PLLIDLC+K+GL+LPPCFMRLP +LKL+I E LPG DLAKV 
Sbjct: 291 --DKVFELWKIVKDGLALPLLIDLCDKAGLELPPCFMRLPMELKLLIFEYLPGDDLAKVC 348

Query: 348 CLNSEMRYLASNNELWXXXXXXXXXXXXXXXQFFKHLFAQYWTTKKNSEQ------PRRR 401
           C  SE++YLASN++LW               +FFK+LFAQY  TKK  EQ      PRR 
Sbjct: 349 CTCSELQYLASNDDLWKKKFEEEFGQRVNGMKFFKNLFAQYRATKKKLEQPILFQNPRRS 408

Query: 402 AFQPGTGFFXXXXXXXXXXXXXXFGVPPIWGGEYDLQPNIGGQLRANPRRGTFLPPCHLG 461
                  FF              FG+PPIWGGEYDLQPN G  L A  RR TF+PPCHLG
Sbjct: 409 GIM---RFF------QRRRFPNRFGMPPIWGGEYDLQPNFGVNLPAYARRRTFIPPCHLG 459

Query: 462 GF 463
            F
Sbjct: 460 EF 461


>Medtr7g057330.1 | F-box SKIP22-like protein | HC |
           chr7:20599792-20600654 | 20130731
          Length = 272

 Score =  287 bits (735), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 158/262 (60%), Positives = 191/262 (72%), Gaps = 10/262 (3%)

Query: 150 PLFVKSVLREAAIGDDASDFKLLILAVHAVILESGFIRVDQVSGMAVNCSHLLDDFPSGS 209
           P FVK VLREA +GDD SDFKLL+ AVHA ILESGF+RVD VSGMA++ SHL+D     S
Sbjct: 5   PNFVKRVLREA-LGDDVSDFKLLVFAVHAFILESGFVRVDHVSGMAISISHLID--DMSS 61

Query: 210 SPVKSLRYTLPEILTKGSSESVSLKIQTLGHIVNVCGSLSNDNGSRLHMVYLDRNKFAPP 269
           S + SLRYTLPEILT GSS S++LKIQTLGH VNV GSL +D GS +HMVYLD+ +FA P
Sbjct: 62  SSMISLRYTLPEILTNGSSHSLNLKIQTLGHFVNVYGSLYDDVGSSVHMVYLDKCRFAKP 121

Query: 270 LDFLL-ANSESKVGDDESGNREKVFELWKMVKDGLASPLLIDLCEKSGLDLPPCFMRLPT 328
           L+FLL +NSES    +  G++++V ELWK+V D LA PLLIDLC+K+GL LPPCFM LP 
Sbjct: 122 LEFLLMSNSESNACVNVDGDKDEVLELWKIVNDRLAFPLLIDLCDKAGLILPPCFMSLPM 181

Query: 329 DLKLIIMENLPGVDLAKVACLNSEMRYLASNNELWXXXXXXXXXXXXXXXQFFKHLFAQY 388
           +LKL+I E LPG DLAKV C  S+++YLASN+ELW               +F+K L+AQY
Sbjct: 182 ELKLVIFEYLPGDDLAKVCCTCSKLQYLASNDELWKKKFEEEFGQSVNGMRFYKSLYAQY 241

Query: 389 WTTKKNSEQ------PRRRAFQ 404
             TKKNSEQ      PR R  +
Sbjct: 242 RETKKNSEQSFSFRIPRTRILR 263


>Medtr4g019560.1 | F-box SKIP22-like protein | HC |
           chr4:6133484-6134885 | 20130731
          Length = 271

 Score =  285 bits (728), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 149/261 (57%), Positives = 187/261 (71%), Gaps = 9/261 (3%)

Query: 150 PLFVKSVLREAAIGDDASDFKLLILAVHAVILESGFIRVDQVSGMAVNCSHLLDDFPSGS 209
           P FVK VLREA +GDD SDFKLL+ AVHA ILESGFIRVD+VSG+ ++ SHL+DD  S S
Sbjct: 5   PDFVKRVLREA-LGDDVSDFKLLVFAVHAFILESGFIRVDRVSGVKISSSHLIDDMSSSS 63

Query: 210 SPVKSLRYTLPEILTKGSSESVSLKIQTLGHIVNVCGSLSNDNGSRLHMVYLDRNKFAPP 269
             +  LRYTLPEILT GS  S++LKIQTLGH VNV GSL +D GS +H VYLD+ +F+ P
Sbjct: 64  --MICLRYTLPEILTNGSPHSLNLKIQTLGHFVNVYGSLYDDVGSNVHRVYLDKYRFSKP 121

Query: 270 LDFLLANSESKVGDDESGNREKVFELWKMVKDGLASPLLIDLCEKSGLDLPPCFMRLPTD 329
           L F+L+N ES    + + +  +VFELWK+V D LA PLL+DLC+K+GL+LPPCFM LP +
Sbjct: 122 LKFMLSNFESIASFNVNDDENEVFELWKIVNDRLALPLLMDLCDKAGLNLPPCFMSLPME 181

Query: 330 LKLIIMENLPGVDLAKVACLNSEMRYLASNNELWXXXXXXXXXXXXXXXQFFKHLFAQYW 389
           LKL+I E LPG DLAKV C  S+++YLASN+ELW               +F+K L+A+Y 
Sbjct: 182 LKLLIFEYLPGDDLAKVCCTCSKLQYLASNDELWKKKFEEEFGQSVNGMRFYKSLYARYR 241

Query: 390 TTKKNSEQ------PRRRAFQ 404
            TKKNS+Q      PR R  +
Sbjct: 242 ATKKNSDQSFSFRIPRTRILR 262