Miyakogusa Predicted Gene

Lj5g3v2063100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2063100.1 Non Characterized Hit- tr|K4BCY7|K4BCY7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,45,6e-18,seg,NULL; coiled-coil,NULL,CUFF.57009.1
         (567 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g105890.1 | transmembrane protein, putative | HC | chr1:47...   259   6e-69
Medtr5g005430.1 | transmembrane protein, putative | HC | chr5:44...   179   6e-45
Medtr4g097790.1 | transmembrane protein, putative | LC | chr4:40...    89   1e-17

>Medtr1g105890.1 | transmembrane protein, putative | HC |
           chr1:47816020-47814383 | 20130731
          Length = 545

 Score =  259 bits (661), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 182/345 (52%), Positives = 211/345 (61%), Gaps = 34/345 (9%)

Query: 250 KGGSAENHGNHMAREEHYKGDDASSAVAHDTHATSTENETFSMENSDLNIETNITKPENE 309
           KGG  ENH NH AREEHYK DDASSAVAHDTH TSTE  T ++E+SDL+++ N  KPENE
Sbjct: 208 KGGLVENHENHEAREEHYKADDASSAVAHDTHETSTE--TGNLEHSDLSLQ-NTRKPENE 264

Query: 310 TAYSDESNQNRNDSNLNVIEGEGVDRISSNASSDKETGNDNLFNSVDISYLNKTFKTSSN 369
           T +SDES  ++N S+L V EGE  D +SSNA++ KETGND+  N    +  +     SSN
Sbjct: 265 TNHSDESYGSQNVSDLKVTEGELTDGVSSNATAGKETGNDSFSNETAKTKPDSQLDLSSN 324

Query: 370 LI----EDDAN-------TSISSEH-------------NKTVDTTMITGDIKNLQTEGSQ 405
           L     E  +N       TS SSE              N TV+TT ITGD+K  QTEG +
Sbjct: 325 LTAVITEASSNSSGTGDDTSSSSEQIKAVILSESDHAQNATVNTT-ITGDMK--QTEGLE 381

Query: 406 QSGNGISEENLPDTDSTVAVKTENGGPAARESSNQRDGESEKVIGFVASNETENSSSNLD 465
           QSG+ ISE NLP  DS V+VK E+   A  ESS       EK  GFVASNET N SSNLD
Sbjct: 382 QSGSKISEGNLPGNDSIVSVKPESRVAAPEESSTLGASALEKTTGFVASNETVNMSSNLD 441

Query: 466 RNESSGTTXXXX---XXXXXXXXXXXXTDATEDETFKGDTSMGGTDETSGSFSADEILDS 522
           RN SS TT                    DATEDE FKGDT  G TDE   + S  EILDS
Sbjct: 442 RNASSDTTESDKSKGSTETSEANEAQNVDATEDEMFKGDTQTGETDEKLDNSSVTEILDS 501

Query: 523 VEHDAIDSFDTHIQDHRDVSEVRTDLDTLPDIRNEGYNGDETAAE 567
           +EHD IDS DT    H D+++ RTDLDTLPDIRNEG + DE AAE
Sbjct: 502 IEHDTIDSSDTQ-NIHEDMAKARTDLDTLPDIRNEGNDSDENAAE 545



 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 68/79 (86%), Gaps = 2/79 (2%)

Query: 1  MIKRFPN-RNPRSKGIKVKHILQIVLLLGICFWLIYQVKHNRGRKKEFDENDAKLSVRTH 59
          MIKR P+ RN RSKG KVKH+LQ +LLLG+CFWLIYQVKHN  +KKEFD+ND KL +RT 
Sbjct: 1  MIKRNPSSRNQRSKGFKVKHVLQAILLLGVCFWLIYQVKHNHDKKKEFDKNDTKLPIRT- 59

Query: 60 QTDQIVKLGRKDLHPGKDE 78
          +TDQI+KLGRKDLHPGK E
Sbjct: 60 ETDQILKLGRKDLHPGKVE 78


>Medtr5g005430.1 | transmembrane protein, putative | HC |
           chr5:444636-441597 | 20130731
          Length = 560

 Score =  179 bits (454), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 149/346 (43%), Positives = 196/346 (56%), Gaps = 41/346 (11%)

Query: 247 DEEKGGSAENHGNHMAREEHYKGDDASSAVAHDTHATSTENETFSMENSDLNIETNITKP 306
           DE   G  E++  H AREE YKGDDASSAV HDT  TSTE ET SMENSD+N E  ITKP
Sbjct: 227 DEGNQGLVESNNIHEAREEQYKGDDASSAVTHDTRTTSTETETVSMENSDVNAEMGITKP 286

Query: 307 ENETAYSDESNQNRNDSNLNVIEGEGVDRISSNASSDKETGNDNLFNSVDISYLNKTF-- 364
           EN+  Y+++  +++  SN ++ E + V    SN+SS  ETGN++L N V  S+ N T   
Sbjct: 287 ENKPNYTEDGIRSQPGSNFSITEVKLVVGAYSNSSSSNETGNNSLSNPVAGSHQNNTALI 346

Query: 365 -------KTSSNLI-------EDDANTSISSEHNKTV--------DT--TMITGDIKNLQ 400
                  +TSSNL         + + T  SSEHNK V        DT  + + GD+KN+Q
Sbjct: 347 YSVRHSEETSSNLTIVVPAAKNNMSGTDTSSEHNKMVMFSGIDKNDTVNSTVAGDVKNVQ 406

Query: 401 TEGSQQSGNGISEENLPDTDSTVAVKTENGGPAARESSNQRDGESEKVIGFVASNETENS 460
           TEG +Q G  +S+ENL  ++  V VKTEN   A  ESSN   G+ EK   FVASNE E  
Sbjct: 407 TEGLEQGGIIVSKENLSGSNLAVPVKTENRAAAGDESSNLEGGDIEKTRRFVASNENE-- 464

Query: 461 SSNLDRNESSGTTXXXXXXXXXXXXXXXXTDATEDETFKGDTSMGGTDETSGSFSADEIL 520
            S +D      T                 T+A + E  KG T      + S S S +   
Sbjct: 465 -SKVD------TVMSETNKTQNLSYVDENTNAAKYEESKGHTQ---ASDASNSSSMNGTS 514

Query: 521 DSVEHDAIDSFDTHIQDHRDVSEVRTDLDTLPDIRNEGYN-GDETA 565
           DS++H A DS+++HI   +D++EV+TDL+T+PDIRN G N GD+TA
Sbjct: 515 DSIKHQATDSYNSHIL--KDMTEVQTDLNTMPDIRNVGDNDGDKTA 558



 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 63/79 (79%)

Query: 1  MIKRFPNRNPRSKGIKVKHILQIVLLLGICFWLIYQVKHNRGRKKEFDENDAKLSVRTHQ 60
          MIKR  +RN RSKG+KVKH+LQI+LL+GIC WLIYQVK +  +KKEFDE+D K+SV    
Sbjct: 1  MIKRSSSRNNRSKGVKVKHVLQIMLLVGICLWLIYQVKRSHDKKKEFDESDKKVSVGAQN 60

Query: 61 TDQIVKLGRKDLHPGKDEL 79
            +I +LGRKDL PGK+E+
Sbjct: 61 AYRITELGRKDLLPGKNEV 79


>Medtr4g097790.1 | transmembrane protein, putative | LC |
          chr4:40364706-40368281 | 20130731
          Length = 783

 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 8/75 (10%)

Query: 1  MIKRFPNRNPRSK-GIKVKHILQIVLLLGICFWLIYQVKHNRGRKKEFDENDAKLSVRTH 59
          M +  P R+ RSK G KVKH LQI +L+G+C WL+YQ+ H+R +K       A     T 
Sbjct: 1  MFRLSPRRSQRSKNGFKVKHALQICVLVGVCVWLVYQIGHSREQK-------ASYGASTK 53

Query: 60 QTDQIVKLGRKDLHP 74
            +++VKLGRKDL P
Sbjct: 54 TGNEVVKLGRKDLKP 68