Miyakogusa Predicted Gene

Lj5g3v2060640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2060640.1 Non Characterized Hit- tr|D8R3B5|D8R3B5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,26.1,4e-18,OST3_OST6,Oligosaccharyl transferase complex,
subunit OST3/OST6; SUBFAMILY NOT NAMED,NULL; DOLICHYL-,CUFF.56591.1
         (343 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g105470.1 | oligosaccharide transporter | HC | chr1:474735...   503   e-143

>Medtr1g105470.1 | oligosaccharide transporter | HC |
           chr1:47473507-47471984 | 20130731
          Length = 343

 Score =  503 bits (1296), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 251/318 (78%), Positives = 284/318 (89%)

Query: 26  STDNDERVSELLSQQSRSKSGVIRLNDQTLSRYISSVETPRPYSLLIFFDATQLHDKSEL 85
           ++ N+ER SELLS  SRS SG+I LNDQ++SRY++S++TPRPYSLLIFFDATQLHDKSEL
Sbjct: 26  NSSNEERTSELLSLSSRSDSGIIHLNDQSISRYLTSIKTPRPYSLLIFFDATQLHDKSEL 85

Query: 86  RLTELRNEFAIVASSFIXXXXXXXXXXXXFFCDIEFKESQLSFSQFGVNALPHIRIVGPN 145
           +LTEL  EF+IVASSFI            FFC+IEFKESQLSFSQFGVNALPHIR+VGPN
Sbjct: 86  KLTELHKEFSIVASSFITNNANSSSLSKLFFCEIEFKESQLSFSQFGVNALPHIRLVGPN 145

Query: 146 HGFQDSEPMDQGDFSRLAESMAEFVEAKTRLSVGPIHRPPFLTTSKLIVIALIFCIWVPF 205
           HG +DSE MDQGDFSRLAESMAEFVE KT+LSVGPIHRPP L+ +K+I+I ++  IW+ F
Sbjct: 146 HGLKDSEHMDQGDFSRLAESMAEFVEVKTKLSVGPIHRPPILSRNKIILIVVVVLIWLSF 205

Query: 206 FVKKVLSGQTIFHEPKVWLAGSVFVYFFSVSGAMHNIIRKMPMFLVDRNDPSKLVFFYQG 265
           FVKK+L+G+T+ H+P+VWLAGSVFVYFFSVSGAMHNIIRKMPMFL DRNDPSKLVFFYQG
Sbjct: 206 FVKKLLTGKTLLHDPRVWLAGSVFVYFFSVSGAMHNIIRKMPMFLQDRNDPSKLVFFYQG 265

Query: 266 SGMQLGAEGFTVGFLYTVVGLLLAFMTHGLVLIKSVTLQRVIMMFALLVSFLAVKQVVSL 325
           SGMQLGAEGFTVGFLYT+VGLLLAFMTHGLV IKSVT+QRV+M+FALLV FLAVKQVV L
Sbjct: 266 SGMQLGAEGFTVGFLYTLVGLLLAFMTHGLVKIKSVTVQRVVMIFALLVCFLAVKQVVFL 325

Query: 326 DNWKTGYGIHGFWPSSWN 343
           DNWKTGYGIHGFWPSSWN
Sbjct: 326 DNWKTGYGIHGFWPSSWN 343