Miyakogusa Predicted Gene
- Lj5g3v2046010.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2046010.1 Non Characterized Hit- tr|I1MM22|I1MM22_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,25.63,2e-18,seg,NULL;
Frigida,Frigida-like; FAMILY NOT NAMED,NULL,CUFF.56947.1
(304 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g103710.1 | frigida-LIKE protein | HC | chr1:46944448-4694... 458 e-129
Medtr8g083500.1 | frigida-LIKE protein | HC | chr8:43605849-4361... 110 2e-24
Medtr4g095080.1 | frigida-like protein | HC | chr4:39679199-3968... 102 5e-22
Medtr8g010160.1 | ABI3-interacting protein | HC | chr8:2588108-2... 92 9e-19
Medtr8g010170.1 | ABI3-interacting protein | HC | chr8:2595983-2... 85 9e-17
>Medtr1g103710.1 | frigida-LIKE protein | HC |
chr1:46944448-46941301 | 20130731
Length = 519
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/301 (76%), Positives = 258/301 (85%), Gaps = 4/301 (1%)
Query: 1 MASTPDPGEVCELTPPPSFDDFQRQTSLMTSCTLLWKELSDHFSSLEQDLLNKSEALKNK 60
M S PDPGE+ ELT P SFDDFQRQTSLMTSCTLLWKELSDHFSSLEQDLLNKSEAL K
Sbjct: 1 MGSIPDPGELTELTQP-SFDDFQRQTSLMTSCTLLWKELSDHFSSLEQDLLNKSEALNRK 59
Query: 61 IXXXXXXXXXXXXXXQHRETTIDGSVQIALRNLDHRRDAALSSLTEDSHDSPLG-GEVDN 119
I +HRE+T+D ++QIALR++D+R +AAL++L+ D G GEVDN
Sbjct: 60 IRSLDNQTNESLNLLRHRESTLDDALQIALRDIDNRTEAALAALSRVREDVEDGDGEVDN 119
Query: 120 GDGLMLKLKSFCLKMDALGFWGFVIGKKKELECLRAEMPAALSECVDPARFVLEAMSKVF 179
G+GLMLKLKSFCLKMDALGFWGFVIGKKKELE LRAEMP AL EC+DPA+FVLEA+S+VF
Sbjct: 120 GEGLMLKLKSFCLKMDALGFWGFVIGKKKELEGLRAEMPEALGECIDPAKFVLEAISEVF 179
Query: 180 PVDKRGEKKGGNDLGWACVLVLESLIPVMVDPVIGKSRMLVTPSVKEEAKDIAETWKQSL 239
PVDKRG+K GNDLGWACVLVLESL+PVMVDPV+ KSRMLVTP+VK+ AKD+AE WK SL
Sbjct: 180 PVDKRGDK-SGNDLGWACVLVLESLVPVMVDPVL-KSRMLVTPTVKKLAKDVAEKWKVSL 237
Query: 240 EERGGIENVKTPDVHTFLQHLVTFGIVNHDDLLLYRKLVIASAWRKHMPKLALSLGLANQ 299
EERGG+ENVKTPDVHTFLQHLVTFGIV+ +DL LYRKLVIASAWRKHMPKLALSLGL +Q
Sbjct: 238 EERGGVENVKTPDVHTFLQHLVTFGIVDSNDLGLYRKLVIASAWRKHMPKLALSLGLTDQ 297
Query: 300 M 300
M
Sbjct: 298 M 298
>Medtr8g083500.1 | frigida-LIKE protein | HC |
chr8:43605849-43610391 | 20130731
Length = 539
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 134/285 (47%), Gaps = 29/285 (10%)
Query: 19 FDDFQRQTSLMTSCTLLWKELSDHFSSLEQDLLNKSEALKNKIXXXXXXXXXXXXXXQHR 78
F++ + Q + + CT L+ +L++HFS L+ + K + L ++ ++
Sbjct: 21 FNELESQKNTLIKCTDLFTKLNNHFSFLQDSISQKFQTLDSQFQSLESRHKETLESLANQ 80
Query: 79 ETTIDGSVQIALRNLDHRRDAALSSLTEDSHDSPLGGEVDNGDGLMLKLKSFCLKMDALG 138
E +I A +D +++AAL++L + S + LKS KMDA
Sbjct: 81 ENSIPERESSAAARIDEQKEAALAALRNPNPPSNIAA----------ALKSLSRKMDAES 130
Query: 139 FWGFVIGKKKELECLRAEMPAALSECVDPARFVLEAMSKVFPVDKRGEKKGGNDLGWACV 198
FVI K+KE LR E+ AAL E VD R VL+A+ + G K G D WAC
Sbjct: 131 LLMFVISKRKESIMLRPEIAAALKEAVDAPRLVLDAVEEYLTCKTEG-KSGVTDKRWACG 189
Query: 199 LVLESLIPVMVDPVIGKSRMLVTPSVKEEAKDIAETWKQSLE---ERGGIENVKTPDVHT 255
L+++ LI + + ++ E A + + WK+ L+ E+G E V
Sbjct: 190 LLIQGLI---------SESSVYSRTIVERAGSLLDLWKEQLDGEPEKGAAEMV------M 234
Query: 256 FLQHLVTFGIVNHDDLLLYRKLVIASAWRKHMPKLALSLGLANQM 300
FLQ +V FG+ + D RK V+ A R+ M K+A SL ++M
Sbjct: 235 FLQMVVCFGLRSKVDDEYLRKSVMKFASRRDMAKVAASLEFGDKM 279
>Medtr4g095080.1 | frigida-like protein | HC |
chr4:39679199-39682625 | 20130731
Length = 545
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 131/305 (42%), Gaps = 41/305 (13%)
Query: 36 WKELSDHFSSLEQDLLNKSEALKNKIXXXXXXXXXXXXXXQHRETTIDGSVQIALRNLDH 95
W E+ HFS LE L K+E L+ K R+ + Q L L
Sbjct: 39 WDEIKQHFSDLEMALNKKNEELQAKEREYEEKQLEMNTLLTQRKAAVTSKEQDLLDRLQE 98
Query: 96 RRDAALSSLTE-------------------------DSHDSP-LGGEVDNGDGL----ML 125
+D A++++ E DSP GE G L
Sbjct: 99 LKDTAVAAIIEARPNDETTTFDFVYDGEDKDNQVSISPEDSPNKSGEKSEGVATEVRPHL 158
Query: 126 KLKSFCLKMDALGFWGFVIGKKKELECLRAEMPAALSECVDPARFVLEAMSKVFPVDKRG 185
LK +C KMDA G +V+ KK++ R E+ AL DPAR VL+ + +P ++
Sbjct: 159 DLKVYCEKMDATGLLDYVVAHKKKVSEFREEVSVALESATDPARLVLDLLLGFYPDNETS 218
Query: 186 EKKGGNDLGWA-------CVLVLESLIPVMVDPVIGKSRMLVTPSVKEEAKDIAETWKQS 238
++ +++G A C+L+LE++ ++ G +L P K++AK IA+ W+
Sbjct: 219 QQ--NDNVGAALQGKRKSCILILEAMASLLARADPGADHLL-NPETKQQAKAIADEWRLK 275
Query: 239 LEERG-GIENVKTPDVHTFLQHLVTFGIVNHDDLLLYRKLVIASAWRKHMPKLALSLGLA 297
L G N + + FLQ L T+ I + D KLV A A + P+L S+GL
Sbjct: 276 LASAGIDAANGNSLEAEAFLQLLSTYRIASEFDEEELCKLVPAVAQNRSAPELCRSIGLT 335
Query: 298 NQMPG 302
+++P
Sbjct: 336 HKVPA 340
>Medtr8g010160.1 | ABI3-interacting protein | HC |
chr8:2588108-2583935 | 20130731
Length = 547
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 129/316 (40%), Gaps = 48/316 (15%)
Query: 33 TLLWKELSDHFSSLEQDLLNKSEALKNKIXXXXXXXXXXXXXXQHRETTIDGSVQIALRN 92
+ WKEL +HF LE+ L + L++ + +E + Q L+
Sbjct: 37 NMKWKELEEHFHGLEKSLKRRFHELEDHEKVFENKTMKAREMLKKQEEAVFAKEQATLQR 96
Query: 93 LDHRRDAALSSL------------------------TEDSHDSPLGGEVDNGDGLMLKLK 128
L +RDAA ++ T D + P+ + +GL+ +K
Sbjct: 97 LQEKRDAATFAILNAREKHRKVSQKDLAIVSNGGHGTSDVEEKPMDAISNVTEGLVEDVK 156
Query: 129 -----------------SFCLKMDALGFWGFVIGKKKELECLRAEMPAALSECVDPARFV 171
C +MD G F+ +K L +R E+P AL D A V
Sbjct: 157 LSPGNGNLESISYPELVKLCKEMDVSGLHKFISDNRKNLAAIREEIPHALKASPDAACLV 216
Query: 172 LEAMSKVF--PVDKRGEKKGGNDLGW--ACVLVLESLIPVMVDPVIGKSRMLVTPSVKEE 227
L+++ + V + KK N LG C++++E L + D G LV+ +K+
Sbjct: 217 LDSLEGFYCMEVSSQDIKKDANLLGLRRTCIMLMECLSDFLTDS--GGISNLVSKDIKDR 274
Query: 228 AKDIAETWKQSLEERG-GIENVKTPDVHTFLQHLVTFGIVNHDDLLLYRKLVIASAWRKH 286
AK++AE WK L+ N + + H FLQ L +F I + D +L+ + R+
Sbjct: 275 AKEVAEEWKPKLDALDMDASNGNSLEAHAFLQLLASFNIASGFDEEELSRLIPMVSRRRQ 334
Query: 287 MPKLALSLGLANQMPG 302
L LGL+ +MPG
Sbjct: 335 TADLCRCLGLSEKMPG 350
>Medtr8g010170.1 | ABI3-interacting protein | HC |
chr8:2595983-2590280 | 20130731
Length = 545
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 137/318 (43%), Gaps = 48/318 (15%)
Query: 31 SCTLLWKELSDHFSSLEQDLLNKSEALKNKIXXXXXXXXXXXXXXQHRETTIDGSVQIAL 90
+ L WKEL +HF LE+ L + L+++ + +E + Q L
Sbjct: 35 TLNLKWKELEEHFQGLEKSLKRRFNELEDQEKEFENKTRKAREMLEKQEAAVFAKEQALL 94
Query: 91 RNLDHRRDAALSSLTE------------------------DSHDSPL-----GGE--VDN 119
+ L +RDA++ ++ + D + P+ G E ++N
Sbjct: 95 QRLQRKRDASVFTIVDARKKYRKVSSKDLGTVFNGSQAAPDVKEKPVDAVSTGAECNIEN 154
Query: 120 GD----GLMLKLKSF------CLKMDALGFWGFVIGKKKELECLRAEMPAALSECVDPAR 169
G + + + S+ C +MDA G F+ +K L +R E+P AL +
Sbjct: 155 GKLSPANVSVDMMSYPELVKLCKEMDAAGLHKFISDNRKNLAAVREEIPLALRAAPNAGC 214
Query: 170 FVLEAMSKVF--PVDKRGEKKGGNDLGW--ACVLVLESLIPVMVDPVIGKSRMLVTPSVK 225
VL+++ + V + KK N LG +++LE L + + +G +++ +K
Sbjct: 215 LVLDSLEGFYCTEVSSQDIKKDANLLGLRRTSIMLLECLSDFLTN--LGSVSNVISKDIK 272
Query: 226 EEAKDIAETWKQSLEERG-GIENVKTPDVHTFLQHLVTFGIVNHDDLLLYRKLVIASAWR 284
+ AK +AE WK L++ N + + H FLQ L +FGI + + +L+ + R
Sbjct: 273 DRAKAVAEEWKPRLDDLDMDASNGNSLEAHAFLQLLASFGIASDFNEEELSRLIPMVSRR 332
Query: 285 KHMPKLALSLGLANQMPG 302
+ L LGL+ +MPG
Sbjct: 333 RQTADLCRCLGLSEKMPG 350