Miyakogusa Predicted Gene

Lj5g3v2045620.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2045620.1 tr|Q6VM27|Q6VM27_LUPAL Cycloidea-like protein
group 1A (Fragment) OS=Lupinus albus PE=4 SV=1,37.34,6e-19,seg,NULL;
TCP,Transcription factor TCP subgroup; R,CYC/TB1, R domain;
TCP,Transcription factor, TCP,CUFF.56523.1
         (223 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g103380.1 | TCP family transcription factor | HC | chr1:46...   110   1e-24

>Medtr1g103380.1 | TCP family transcription factor | HC |
           chr1:46797920-46794627 | 20130731
          Length = 489

 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/264 (37%), Positives = 118/264 (44%), Gaps = 50/264 (18%)

Query: 1   MLEFDKPSNTLEWLFTKSESAIQELARXXXXXXXXXXXXXXX-XXXXXLFGGGDNHNGTN 59
           MLEFDKPSNTLEWLFTKS++AI+ELAR                              G +
Sbjct: 235 MLEFDKPSNTLEWLFTKSDTAIKELARTKNAACYNNNNNDNSPFFDSNSNKSFSGGGGGD 294

Query: 60  SIRGRGNSKLKWTTQRDQDVCVLQNKKESXXXXXXXXXXXTCYKML-------EDQRCPA 112
                   KLKWT +        + KKES           TCYKM        E+ R P 
Sbjct: 295 GSCSSKGRKLKWTQKE-------ETKKESRERARARARERTCYKMCSSGRMQQEEIRYPG 347

Query: 113 ------NTTQIMHQLRSS--SPI------------QLLQ------PYPHLMDNSEAVSXX 146
                 NT Q++ QL SS  SP+            QLLQ      P  H   N       
Sbjct: 348 PGADSTNTQQMLQQLISSSTSPVDSTETEAYARWRQLLQLQTYSNPSFHNHHNLLDSEIP 407

Query: 147 XXXXXFNVIEESIMIKRNMMSSNS--HPHENHHLAIPNKEAGFNNNYIDYPLLQPYSTTP 204
                FNVIEESIMIKRNMMS+ S  + H+N    IP +   FN+N  DY L     +TP
Sbjct: 408 RDHGGFNVIEESIMIKRNMMSATSSQYHHQNLIPTIPKELPSFNHNINDYSLFP--CSTP 465

Query: 205 NWEIAT-----MNMNLSTCFMNQW 223
           NWE ++       MNLSTCF+N W
Sbjct: 466 NWETSSNFCGIATMNLSTCFLNPW 489