Miyakogusa Predicted Gene

Lj5g3v2045600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2045600.1 Non Characterized Hit- tr|I1NGH9|I1NGH9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.398
PE=4,80.36,0.000000000000001,seg,NULL; S-methyl_trans,Homocysteine
S-methyltransferase; HCY,Homocysteine S-methyltransferase;
PRE,gene.g62846.t1.1
         (269 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g103290.1 | homocysteine S-methyltransferase-like protein ...   357   5e-99
Medtr7g095280.1 | homocysteine S-methyltransferase-like protein ...   285   4e-77
Medtr1g103290.2 | homocysteine S-methyltransferase-like protein ...   267   9e-72
Medtr5g056640.1 | homocysteine S-methyltransferase-like protein ...   236   1e-62

>Medtr1g103290.1 | homocysteine S-methyltransferase-like protein |
           HC | chr1:46744608-46748707 | 20130731
          Length = 331

 Score =  357 bits (917), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 175/216 (81%), Positives = 191/216 (88%)

Query: 6   FMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLDAGAN 65
            M+DFL+KCGGY +IDGGFATELERHG DL+DPLWSAKCL +SPHLVRRVHLDYLD+GAN
Sbjct: 1   MMKDFLNKCGGYGIIDGGFATELERHGIDLNDPLWSAKCLFTSPHLVRRVHLDYLDSGAN 60

Query: 66  IILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRDERYR 125
           IILT+SYQAT+QGFEAKGFS+EEG+ LLRRSVELA EAR+IY  RCTKDS DFIRDERYR
Sbjct: 61  IILTSSYQATIQGFEAKGFSKEEGQALLRRSVELAREARDIYYDRCTKDSFDFIRDERYR 120

Query: 126 RRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIAFETI 185
            RPIL+AASVGSYGAYLADG+EYTGDYGDA+TV TLKDFHRERVKILVDAGADLIAFETI
Sbjct: 121 SRPILIAASVGSYGAYLADGSEYTGDYGDAITVHTLKDFHRERVKILVDAGADLIAFETI 180

Query: 186 PNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
           PNK+            GIEIPAW SFSCKDE+NV S
Sbjct: 181 PNKLDAQAYAELLEEEGIEIPAWFSFSCKDENNVAS 216



 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 49/60 (81%)

Query: 210 SFSCKDESNVKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGKPQGK 269
           +++ ++ + VKSSG AE DFVPYI KW  AGA+LFGGCCRTTP TIRGI EA+YGKP GK
Sbjct: 270 TYNAENNTWVKSSGEAEEDFVPYIGKWRYAGATLFGGCCRTTPKTIRGITEALYGKPHGK 329


>Medtr7g095280.1 | homocysteine S-methyltransferase-like protein |
           HC | chr7:38139328-38133194 | 20130731
          Length = 340

 Score =  285 bits (728), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 139/219 (63%), Positives = 170/219 (77%), Gaps = 3/219 (1%)

Query: 6   FMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSP--HLVRRVHLDYLDAG 63
            + DFL + GG A+IDGG ATELERHGADL+DPLWSAKCLIS P  HL+R+VHLDYL+ G
Sbjct: 5   LISDFLHRAGGTAIIDGGLATELERHGADLNDPLWSAKCLISIPQSHLIRQVHLDYLENG 64

Query: 64  ANIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRDER 123
           A+II TASYQAT+QGF+ KGFS EE E +LRRSVE+A EAR++Y  RC   SS    D+R
Sbjct: 65  ADIITTASYQATIQGFKEKGFSNEESENMLRRSVEIACEARDLYYERCAACSSGKNADDR 124

Query: 124 -YRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIAF 182
             ++RPIL+AASVGSYGAYLADG+EY+G+YGDA+T++TLKDFHR RV++L DA ADL+AF
Sbjct: 125 ILKQRPILIAASVGSYGAYLADGSEYSGNYGDAITLKTLKDFHRRRVQVLADASADLLAF 184

Query: 183 ETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
           ETIPNK+             I++PAW  F+ KD  NV S
Sbjct: 185 ETIPNKIEAQAFAELLEEENIKVPAWFCFNSKDGINVVS 223



 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 35/47 (74%)

Query: 219 VKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGK 265
           ++++GV ++DFV Y+ KWC+ GA L GGCCRTTP T+RGI   +Y  
Sbjct: 286 MQNTGVTDKDFVSYVSKWCELGACLVGGCCRTTPVTVRGIYNTLYSN 332


>Medtr1g103290.2 | homocysteine S-methyltransferase-like protein |
           HC | chr1:46746234-46748707 | 20130731
          Length = 307

 Score =  267 bits (682), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 135/169 (79%), Positives = 147/169 (86%)

Query: 53  RRVHLDYLDAGANIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCT 112
           + VHLDYLD+GANIILT+SYQAT+QGFEAKGFS+EEG+ LLRRSVELA EAR+IY  RCT
Sbjct: 24  KLVHLDYLDSGANIILTSSYQATIQGFEAKGFSKEEGQALLRRSVELAREARDIYYDRCT 83

Query: 113 KDSSDFIRDERYRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKIL 172
           KDS DFIRDERYR RPIL+AASVGSYGAYLADG+EYTGDYGDA+TV TLKDFHRERVKIL
Sbjct: 84  KDSFDFIRDERYRSRPILIAASVGSYGAYLADGSEYTGDYGDAITVHTLKDFHRERVKIL 143

Query: 173 VDAGADLIAFETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
           VDAGADLIAFETIPNK+            GIEIPAW SFSCKDE+NV S
Sbjct: 144 VDAGADLIAFETIPNKLDAQAYAELLEEEGIEIPAWFSFSCKDENNVAS 192



 Score = 91.3 bits (225), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 49/60 (81%)

Query: 210 SFSCKDESNVKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGKPQGK 269
           +++ ++ + VKSSG AE DFVPYI KW  AGA+LFGGCCRTTP TIRGI EA+YGKP GK
Sbjct: 246 TYNAENNTWVKSSGEAEEDFVPYIGKWRYAGATLFGGCCRTTPKTIRGITEALYGKPHGK 305


>Medtr5g056640.1 | homocysteine S-methyltransferase-like protein |
           HC | chr5:23320750-23325183 | 20130731
          Length = 326

 Score =  236 bits (603), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 113/220 (51%), Positives = 159/220 (72%), Gaps = 7/220 (3%)

Query: 2   ETALFMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLD 61
           E    ++D ++  GG  V DGGFAT+LE+HGA ++DPLWSA CLI  PHL+++VH++YL+
Sbjct: 4   EKKSLLQDLIENSGGCVVTDGGFATQLEKHGAFINDPLWSAICLIKQPHLIKKVHMEYLE 63

Query: 62  AGANIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRD 121
           AGA+I++T+SYQAT+ GF +KG S EEGE+LL+RSV+LA+EAR+ + +   ++  +    
Sbjct: 64  AGADILVTSSYQATIPGFLSKGLSIEEGESLLQRSVKLAVEARDSFWSSAKRNPGN---- 119

Query: 122 ERYRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIA 181
            +YRR   LVAAS+GSYGAYLADG+EY G YG  V++  LKDFHR R+++LV+AG DL+A
Sbjct: 120 -KYRRA--LVAASIGSYGAYLADGSEYRGLYGPDVSLVKLKDFHRRRLQVLVEAGPDLLA 176

Query: 182 FETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
           FETIPNK+             ++IP+W+ F+  D  N  S
Sbjct: 177 FETIPNKLEAQACVELLEEINVQIPSWICFTSVDGENAPS 216