Miyakogusa Predicted Gene
- Lj5g3v2045600.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2045600.1 Non Characterized Hit- tr|I1NGH9|I1NGH9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.398
PE=4,80.36,0.000000000000001,seg,NULL; S-methyl_trans,Homocysteine
S-methyltransferase; HCY,Homocysteine S-methyltransferase;
PRE,gene.g62846.t1.1
(269 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g103290.1 | homocysteine S-methyltransferase-like protein ... 357 5e-99
Medtr7g095280.1 | homocysteine S-methyltransferase-like protein ... 285 4e-77
Medtr1g103290.2 | homocysteine S-methyltransferase-like protein ... 267 9e-72
Medtr5g056640.1 | homocysteine S-methyltransferase-like protein ... 236 1e-62
>Medtr1g103290.1 | homocysteine S-methyltransferase-like protein |
HC | chr1:46744608-46748707 | 20130731
Length = 331
Score = 357 bits (917), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 175/216 (81%), Positives = 191/216 (88%)
Query: 6 FMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLDAGAN 65
M+DFL+KCGGY +IDGGFATELERHG DL+DPLWSAKCL +SPHLVRRVHLDYLD+GAN
Sbjct: 1 MMKDFLNKCGGYGIIDGGFATELERHGIDLNDPLWSAKCLFTSPHLVRRVHLDYLDSGAN 60
Query: 66 IILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRDERYR 125
IILT+SYQAT+QGFEAKGFS+EEG+ LLRRSVELA EAR+IY RCTKDS DFIRDERYR
Sbjct: 61 IILTSSYQATIQGFEAKGFSKEEGQALLRRSVELAREARDIYYDRCTKDSFDFIRDERYR 120
Query: 126 RRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIAFETI 185
RPIL+AASVGSYGAYLADG+EYTGDYGDA+TV TLKDFHRERVKILVDAGADLIAFETI
Sbjct: 121 SRPILIAASVGSYGAYLADGSEYTGDYGDAITVHTLKDFHRERVKILVDAGADLIAFETI 180
Query: 186 PNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
PNK+ GIEIPAW SFSCKDE+NV S
Sbjct: 181 PNKLDAQAYAELLEEEGIEIPAWFSFSCKDENNVAS 216
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 49/60 (81%)
Query: 210 SFSCKDESNVKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGKPQGK 269
+++ ++ + VKSSG AE DFVPYI KW AGA+LFGGCCRTTP TIRGI EA+YGKP GK
Sbjct: 270 TYNAENNTWVKSSGEAEEDFVPYIGKWRYAGATLFGGCCRTTPKTIRGITEALYGKPHGK 329
>Medtr7g095280.1 | homocysteine S-methyltransferase-like protein |
HC | chr7:38139328-38133194 | 20130731
Length = 340
Score = 285 bits (728), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 170/219 (77%), Gaps = 3/219 (1%)
Query: 6 FMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSP--HLVRRVHLDYLDAG 63
+ DFL + GG A+IDGG ATELERHGADL+DPLWSAKCLIS P HL+R+VHLDYL+ G
Sbjct: 5 LISDFLHRAGGTAIIDGGLATELERHGADLNDPLWSAKCLISIPQSHLIRQVHLDYLENG 64
Query: 64 ANIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRDER 123
A+II TASYQAT+QGF+ KGFS EE E +LRRSVE+A EAR++Y RC SS D+R
Sbjct: 65 ADIITTASYQATIQGFKEKGFSNEESENMLRRSVEIACEARDLYYERCAACSSGKNADDR 124
Query: 124 -YRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIAF 182
++RPIL+AASVGSYGAYLADG+EY+G+YGDA+T++TLKDFHR RV++L DA ADL+AF
Sbjct: 125 ILKQRPILIAASVGSYGAYLADGSEYSGNYGDAITLKTLKDFHRRRVQVLADASADLLAF 184
Query: 183 ETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
ETIPNK+ I++PAW F+ KD NV S
Sbjct: 185 ETIPNKIEAQAFAELLEEENIKVPAWFCFNSKDGINVVS 223
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 219 VKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGK 265
++++GV ++DFV Y+ KWC+ GA L GGCCRTTP T+RGI +Y
Sbjct: 286 MQNTGVTDKDFVSYVSKWCELGACLVGGCCRTTPVTVRGIYNTLYSN 332
>Medtr1g103290.2 | homocysteine S-methyltransferase-like protein |
HC | chr1:46746234-46748707 | 20130731
Length = 307
Score = 267 bits (682), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 135/169 (79%), Positives = 147/169 (86%)
Query: 53 RRVHLDYLDAGANIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCT 112
+ VHLDYLD+GANIILT+SYQAT+QGFEAKGFS+EEG+ LLRRSVELA EAR+IY RCT
Sbjct: 24 KLVHLDYLDSGANIILTSSYQATIQGFEAKGFSKEEGQALLRRSVELAREARDIYYDRCT 83
Query: 113 KDSSDFIRDERYRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKIL 172
KDS DFIRDERYR RPIL+AASVGSYGAYLADG+EYTGDYGDA+TV TLKDFHRERVKIL
Sbjct: 84 KDSFDFIRDERYRSRPILIAASVGSYGAYLADGSEYTGDYGDAITVHTLKDFHRERVKIL 143
Query: 173 VDAGADLIAFETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
VDAGADLIAFETIPNK+ GIEIPAW SFSCKDE+NV S
Sbjct: 144 VDAGADLIAFETIPNKLDAQAYAELLEEEGIEIPAWFSFSCKDENNVAS 192
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 49/60 (81%)
Query: 210 SFSCKDESNVKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGKPQGK 269
+++ ++ + VKSSG AE DFVPYI KW AGA+LFGGCCRTTP TIRGI EA+YGKP GK
Sbjct: 246 TYNAENNTWVKSSGEAEEDFVPYIGKWRYAGATLFGGCCRTTPKTIRGITEALYGKPHGK 305
>Medtr5g056640.1 | homocysteine S-methyltransferase-like protein |
HC | chr5:23320750-23325183 | 20130731
Length = 326
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 159/220 (72%), Gaps = 7/220 (3%)
Query: 2 ETALFMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLD 61
E ++D ++ GG V DGGFAT+LE+HGA ++DPLWSA CLI PHL+++VH++YL+
Sbjct: 4 EKKSLLQDLIENSGGCVVTDGGFATQLEKHGAFINDPLWSAICLIKQPHLIKKVHMEYLE 63
Query: 62 AGANIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRD 121
AGA+I++T+SYQAT+ GF +KG S EEGE+LL+RSV+LA+EAR+ + + ++ +
Sbjct: 64 AGADILVTSSYQATIPGFLSKGLSIEEGESLLQRSVKLAVEARDSFWSSAKRNPGN---- 119
Query: 122 ERYRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIA 181
+YRR LVAAS+GSYGAYLADG+EY G YG V++ LKDFHR R+++LV+AG DL+A
Sbjct: 120 -KYRRA--LVAASIGSYGAYLADGSEYRGLYGPDVSLVKLKDFHRRRLQVLVEAGPDLLA 176
Query: 182 FETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
FETIPNK+ ++IP+W+ F+ D N S
Sbjct: 177 FETIPNKLEAQACVELLEEINVQIPSWICFTSVDGENAPS 216