Miyakogusa Predicted Gene

Lj5g3v2029590.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2029590.2 Non Characterized Hit- tr|I1L3G1|I1L3G1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,56.84,3e-17,coiled-coil,NULL,CUFF.56453.2
         (250 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g101945.1 | ACI13 | HC | chr1:46028094-46024290 | 20130731      374   e-104

>Medtr1g101945.1 | ACI13 | HC | chr1:46028094-46024290 | 20130731
          Length = 252

 Score =  374 bits (959), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 192/251 (76%), Positives = 213/251 (84%), Gaps = 6/251 (2%)

Query: 1   MASN-PSLLPEIGPDGLAREASVISYTEKIIQEEQLQLRKYIEENYSKIRDVERELANLT 59
           MASN PSL PEIGPDGLAREA+VI YTE+II+EEQLQL KYI+ENYSKIR+VEREL NLT
Sbjct: 1   MASNNPSLRPEIGPDGLAREAAVIGYTERIIEEEQLQLHKYIQENYSKIRNVERELQNLT 60

Query: 60  LEMKLTAGPKKAALEHLRKKIEVSTEKIRLAKLNEEQARKAWESAAKVVKDEEAVKQKLC 119
           LEMKLTAGPKK+ALEHLRKKIE STEKIR AKL EEQARK WE+AAKVVK+EEA+K+KLC
Sbjct: 61  LEMKLTAGPKKSALEHLRKKIEHSTEKIRAAKLKEEQARKVWEAAAKVVKEEEAIKEKLC 120

Query: 120 EDLSNLVQESSTSQFSRLEELKRRLEAMNPSRASTNISQDGRSGSPAQDSTTGDGSSVPK 179
           EDLSNLVQESS SQF+RL ELKRRLEA+NPS  +TN + DGRS S +Q+S T DGSSVP 
Sbjct: 121 EDLSNLVQESSQSQFARLAELKRRLEALNPSHTTTNANHDGRSESSSQESKTQDGSSVPN 180

Query: 180 ARESSGGSAETVPNQSNDQKVAATDR----PSEGGDGRSKKKVNFQSKGKGIGAVPKGRA 235
           ARESSGGSA +V +QSN QK A TDR    P    +G+SKKKVNFQ KGKGIG V KGR+
Sbjct: 181 ARESSGGSAASVTDQSNGQKAAVTDRLNQQPPNESEGKSKKKVNFQLKGKGIGVVSKGRS 240

Query: 236 ST-GWTGAGFD 245
           S  GWTGAGFD
Sbjct: 241 SAPGWTGAGFD 251