Miyakogusa Predicted Gene

Lj5g3v2029570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2029570.1 Non Characterized Hit- tr|F4JSL7|F4JSL7_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At4,36.1,6e-18,DUF4378,Domain of unknown function DUF4378;
VARLMGL,NULL; seg,NULL,CUFF.56443.1
         (674 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g101910.1 | DUF4378 domain protein | HC | chr1:46007410-46...   574   e-163
Medtr1g101910.2 | DUF4378 domain protein | HC | chr1:46008060-46...   491   e-138
Medtr6g089530.1 | DUF4378 domain protein | HC | chr6:22719616-22...   295   1e-79

>Medtr1g101910.1 | DUF4378 domain protein | HC |
           chr1:46007410-46010299 | 20130731
          Length = 642

 Score =  574 bits (1479), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 364/672 (54%), Positives = 427/672 (63%), Gaps = 90/672 (13%)

Query: 1   MGKDYWYWXXXXXXXXXXXXXXATTQTQIPSGCMCXXXXXXXXXXXXXSTNPQQQQQPSG 60
           MGKD WYW                 +T IPSGCMC               N QQ    S 
Sbjct: 1   MGKD-WYWTGRRRSSKKTE----AAETDIPSGCMCAVFQAFDFHPFQLPINQQQSSFNSS 55

Query: 61  IPNHHNTVPKGAEAPRNSLESEDGTVTSISKEENFKIPK---IRTSGSTRGXXXXXXXXX 117
            P H  ++PKGAEAPRNSLE EDGT +SISK+++FKIPK   I+T G +           
Sbjct: 56  SPIH--SLPKGAEAPRNSLECEDGTFSSISKQDSFKIPKNIRIKTKGGS-----FSDLSN 108

Query: 118 XXXXPGTKTPTLVARLMGLDLLPDXXXXXXXXXXCLSTPNPHYH-QNRTRQHIQIIKHRN 176
               PGTKTPTLVARLMGLDLLPD            STP    H QNR +Q I+I+KHR+
Sbjct: 109 DLCSPGTKTPTLVARLMGLDLLPDANSPSSSSSSSFSTPKRQSHYQNRPKQDIKIMKHRH 168

Query: 177 STDNVSTRSLPETPRISSARRSDVVEHRLSLQINKENMGLGEDLEGPRFSFSKRKY-DEN 235
           STD     S+ +TP +SS R S  VEHRLSLQINKENM LGEDLE PR SFSKRK+ DEN
Sbjct: 169 STD-----SVIKTPTLSSERTS-YVEHRLSLQINKENMNLGEDLETPRSSFSKRKFFDEN 222

Query: 236 SSRSPSHYARQIVKQVKESVSRKVGLDITNTVKNREQGR--EDVVNQSKFKKPTKISVKP 293
           + RSPSHYARQIVKQVKES+SRKVG+DITNTVKNREQ +  ED V Q KFKK    ++KP
Sbjct: 223 NCRSPSHYARQIVKQVKESMSRKVGMDITNTVKNREQEKVKEDFVAQIKFKK----ALKP 278

Query: 294 LDETSPGK--HSNQSYSPRPSRFMDTKHK--PNTTKPSPIAPNYQNTKPSPSPPPMVNIE 349
           LDE++ GK   +N S+SPR SRF D  HK  P TT   P   N        SPPP VNIE
Sbjct: 279 LDESNQGKVPSTNTSHSPRLSRFNDNNHKHSPTTT---PRDQNTHQVLKQSSPPPAVNIE 335

Query: 350 AELSRVLTKPKPQALLQKELNNPKSVQKHKK-------PTQIRNKPPQ--TSIRNKQEES 400
           A++SRV TKP+ QA+ +KE  + KS  K KK       P   RNKPPQ  +SIRNKQEES
Sbjct: 336 AQVSRVSTKPQTQAMSEKE--DKKSFPKCKKTAHGNLSPRINRNKPPQKSSSIRNKQEES 393

Query: 401 FITRSPSNTRANDIKTKSKRTHXXXXXXXXXXXXXXXXXXXXKSNPSPPTIKIP-QIQVK 459
           FIT     TRA+DIKT SKRTH                     +N  P  + +   + + 
Sbjct: 394 FIT-----TRASDIKTNSKRTHPIS------------------NNNVPNLLHLKTHLSLP 430

Query: 460 TQTQESDDIQEAKSSTQLFS-SLRQSTLCTRGRTNDEDKANGVYTATGAGDEGPEYQYIT 518
            Q Q +DD+QEAK+ +QLFS S  + TL TRG TNDE K+NG  +A GA +EG EYQYIT
Sbjct: 431 AQKQVNDDVQEAKNMSQLFSTSCHKYTLATRGTTNDESKSNG-SSAAGAENEGSEYQYIT 489

Query: 519 TLLSRTGVHKATSLPHHHFQWFSSTHPLDPLLFHRLEQHYPLSNSFASSIESYRDCKFRQ 578
           T+LSR+G+H+AT      FQWFSSTHPLDP +FHRLE  YP +          +D  F Q
Sbjct: 490 TILSRSGIHRATVTNLQDFQWFSSTHPLDPSIFHRLEL-YPTA----------KDSNFTQ 538

Query: 579 KNHLGPRCNRRLMFDLVDELLSEILVRPKGKGQGKSHRGLLLETVWKRVRSFPRAKCEVL 638
           KN LGPRCNRRL+FDLVDE+LSEIL+RP      K + GLLL+TVWKRV SFPRAKCEVL
Sbjct: 539 KNELGPRCNRRLLFDLVDEVLSEILIRP------KCYHGLLLDTVWKRVGSFPRAKCEVL 592

Query: 639 EDIDGLIELEDV 650
           EDIDGLIE+++V
Sbjct: 593 EDIDGLIEMKEV 604


>Medtr1g101910.2 | DUF4378 domain protein | HC |
           chr1:46008060-46010253 | 20130731
          Length = 518

 Score =  491 bits (1264), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 303/536 (56%), Positives = 357/536 (66%), Gaps = 75/536 (13%)

Query: 134 MGLDLLPDXXXXXXXXXXCLSTPNPHYH-QNRTRQHIQIIKHRNSTDNVSTRSLPETPRI 192
           MGLDLLPD            STP    H QNR +Q I+I+KHR+STD     S+ +TP +
Sbjct: 1   MGLDLLPDANSPSSSSSSSFSTPKRQSHYQNRPKQDIKIMKHRHSTD-----SVIKTPTL 55

Query: 193 SSARRSDVVEHRLSLQINKENMGLGEDLEGPRFSFSKRKY-DENSSRSPSHYARQIVKQV 251
           SS R S  VEHRLSLQINKENM LGEDLE PR SFSKRK+ DEN+ RSPSHYARQIVKQV
Sbjct: 56  SSERTS-YVEHRLSLQINKENMNLGEDLETPRSSFSKRKFFDENNCRSPSHYARQIVKQV 114

Query: 252 KESVSRKVGLDITNTVKNREQGR--EDVVNQSKFKKPTKISVKPLDETSPGK--HSNQSY 307
           KES+SRKVG+DITNTVKNREQ +  ED V Q KFKK    ++KPLDE++ GK   +N S+
Sbjct: 115 KESMSRKVGMDITNTVKNREQEKVKEDFVAQIKFKK----ALKPLDESNQGKVPSTNTSH 170

Query: 308 SPRPSRFMDTKHK--PNTTKPSPIAPNYQNTKPSPSPPPMVNIEAELSRVLTKPKPQALL 365
           SPR SRF D  HK  P TT   P   N        SPPP VNIEA++SRV TKP+ QA+ 
Sbjct: 171 SPRLSRFNDNNHKHSPTTT---PRDQNTHQVLKQSSPPPAVNIEAQVSRVSTKPQTQAMS 227

Query: 366 QKELNNPKSVQKHKK-------PTQIRNKPPQ--TSIRNKQEESFITRSPSNTRANDIKT 416
           +KE  + KS  K KK       P   RNKPPQ  +SIRNKQEESFIT     TRA+DIKT
Sbjct: 228 EKE--DKKSFPKCKKTAHGNLSPRINRNKPPQKSSSIRNKQEESFIT-----TRASDIKT 280

Query: 417 KSKRTHXXXXXXXXXXXXXXXXXXXXKSNPSPPTIKIP-QIQVKTQTQESDDIQEAKSST 475
            SKRTH                     +N  P  + +   + +  Q Q +DD+QEAK+ +
Sbjct: 281 NSKRTHPIS------------------NNNVPNLLHLKTHLSLPAQKQVNDDVQEAKNMS 322

Query: 476 QLFS-SLRQSTLCTRGRTNDEDKANGVYTATGAGDEGPEYQYITTLLSRTGVHKATSLPH 534
           QLFS S  + TL TRG TNDE K+NG  +A GA +EG EYQYITT+LSR+G+H+AT    
Sbjct: 323 QLFSTSCHKYTLATRGTTNDESKSNG-SSAAGAENEGSEYQYITTILSRSGIHRATVTNL 381

Query: 535 HHFQWFSSTHPLDPLLFHRLEQHYPLSNSFASSIESYRDCKFRQKNHLGPRCNRRLMFDL 594
             FQWFSSTHPLDP +FHRLE  YP          + +D  F QKN LGPRCNRRL+FDL
Sbjct: 382 QDFQWFSSTHPLDPSIFHRLEL-YP----------TAKDSNFTQKNELGPRCNRRLLFDL 430

Query: 595 VDELLSEILVRPKGKGQGKSHRGLLLETVWKRVRSFPRAKCEVLEDIDGLIELEDV 650
           VDE+LSEIL+RP      K + GLLL+TVWKRV SFPRAKCEVLEDIDGLIE+++V
Sbjct: 431 VDEVLSEILIRP------KCYHGLLLDTVWKRVGSFPRAKCEVLEDIDGLIEMKEV 480


>Medtr6g089530.1 | DUF4378 domain protein | HC |
           chr6:22719616-22715405 | 20130731
          Length = 694

 Score =  295 bits (755), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 264/636 (41%), Positives = 326/636 (51%), Gaps = 135/636 (21%)

Query: 67  TVPKGAEAPRNSLESEDGTVT-SISKEENFKIPK---IRTSGSTRGXXXXXXXXXXXXXP 122
           +V KGAEAPRNSL+SED  V+ S+SKEEN KIPK   I+T  S  G             P
Sbjct: 103 SVSKGAEAPRNSLKSEDSIVSASLSKEENLKIPKNIQIKTKRSN-GGNLTDLSSEISTSP 161

Query: 123 GTKTPTLVARLMGLDLLPDXXXXXXXXXXCLSTPNP--------HYHQNRTRQHIQIIKH 174
           GTKTPTLVARLMGLDLLP+           LSTPN         H HQ RT+Q     K 
Sbjct: 162 GTKTPTLVARLMGLDLLPNPNSPSFSSP--LSTPNSQGKNNIIQHLHQVRTKQQQFQTKA 219

Query: 175 RNSTDNVSTRSLPETPRISSARRSDVVEHRLSLQINKENMGLGEDLEGPRFSFSKRKYDE 234
           RNS D+       E  R+SS+R+++   HRLSLQINKEN   GED E PRFSFSKRK DE
Sbjct: 220 RNSIDS------SEITRMSSSRKTEFDHHRLSLQINKENNIGGEDFELPRFSFSKRKIDE 273

Query: 235 NSSRSPSHYARQIVKQVKESV-SRKVGLDITNTVK-NREQG------------------- 273
           NS +S +HYA+QIVKQVKESV SRKVG DITNT+K N+  G                   
Sbjct: 274 NSYKSSNHYAKQIVKQVKESVVSRKVGQDITNTLKSNQVIGIQQNSNEPDYLPRKDQLLT 333

Query: 274 REDVVNQSKFKKPTKISVKPLDETSPGKHSN--QSYSPRPSRFMDTKHKPNTTKPSPIAP 331
           RE+V+ Q + K+  K        T+  K SN   S SPR  RF++ KHKPNTT       
Sbjct: 334 REEVLGQLRIKRCPK--------TTSLKDSNPISSCSPRI-RFIENKHKPNTTTD----- 379

Query: 332 NYQNTKPSPSPPPMVNIEAELSRVLTKPKPQALLQKELNNPKSVQKHKKPTQIRNKPPQT 391
             QNTKP               +  T  + Q    K+L +      ++K +    + P+T
Sbjct: 380 --QNTKP---------------KAYTLKEEQESSDKKLVSKCKKDANEKFSSRFKRLPKT 422

Query: 392 SIRNKQEESFITRSPSNTRANDIK--TKSKRTHXXXXXXXXXXXXXXXXXXXXKSNPSPP 449
           S  N         S SN+RANDI+  TKSKR                       +  S  
Sbjct: 423 SDIN-------ISSTSNSRANDIRSNTKSKRI---------------SNVLSIGTESSYL 460

Query: 450 TIKIPQIQVKTQTQESDDI-QEAKSSTQLFSSLRQSTLCTRGRTND--EDKANGVYTATG 506
             KIP  QV ++TQ+S    Q +  S Q +      TL  +  +    EDK NG   AT 
Sbjct: 461 ANKIPLKQV-SETQDSKLCPQLSSCSRQRYKQEGTVTLSNQEPSTKVIEDKFNG---ATT 516

Query: 507 AGDEGPEYQYITTLLSRTGVHKATSLPHHHF-QWFSSTHPLDPLLFHRLEQHYPLSNSFA 565
                PE+QYIT +L++ G    T+  +  F +WFSSTH LDP +FH LEQ         
Sbjct: 517 LETNQPEFQYITEILNKHGT--ITTTKNVSFNKWFSSTHLLDPSIFHHLEQ--------- 565

Query: 566 SSIESYRDCKFRQKNHLGPRCNRRLMFDLVDELLSEILVRPKGKGQGKSH--RGL----- 618
               S  D     KN L  R NR+L+FDLVDE+L EIL +P G G+ + +   G      
Sbjct: 566 ----STND-NIIIKNQLCHRWNRKLLFDLVDEVLIEIL-KPNG-GEKRLYFLDGFCDQWT 618

Query: 619 ---LLETVWKRVRSFPRAKCEVLEDIDGLIELEDVQ 651
              L E V KRV  FP AKCEVL+DID LIE ED++
Sbjct: 619 ITELTERVLKRVVEFPCAKCEVLDDIDNLIEGEDME 654