Miyakogusa Predicted Gene

Lj5g3v2028380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2028380.1 Non Characterized Hit- tr|F6H6C7|F6H6C7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.35,1e-16,C2H2 and C2HC zinc fingers,NULL; seg,NULL; zinc
finger,Zinc finger, C2H2-like; ZINC_FINGER_C2H2_1,Zi,CUFF.56428.1
         (163 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g039590.1 | hypothetical protein | LC | chr8:14719961-1471...    51   5e-07

>Medtr8g039590.1 | hypothetical protein | LC |
           chr8:14719961-14717313 | 20130731
          Length = 103

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/42 (61%), Positives = 27/42 (64%), Gaps = 2/42 (4%)

Query: 113 GDFEEADRQFXXXXXXXXXXKRVCPTVEMLVRKRVTPHSQLE 154
           GDFEE D QF          KR CPTVEMLVRKRV P +QLE
Sbjct: 26  GDFEETDEQFRSMNRGGR--KRKCPTVEMLVRKRVAPSTQLE 65