Miyakogusa Predicted Gene

Lj5g3v2027210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2027210.1 Non Characterized Hit- tr|I1MQ14|I1MQ14_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
GN=G,79.23,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; coiled-coil,NULL; LIM_bind,NULL,CUFF.56764.1
         (868 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g089075.2 | transcriptional corepressor SEUSS-like protein...   376   e-104
Medtr3g089075.1 | transcriptional corepressor SEUSS-like protein...   376   e-104
Medtr1g029400.1 | transcriptional corepressor SEUSS-like protein...   375   e-104
Medtr1g029400.2 | transcriptional corepressor SEUSS-like protein...   375   e-104

>Medtr3g089075.2 | transcriptional corepressor SEUSS-like protein |
           HC | chr3:40781704-40775494 | 20130731
          Length = 891

 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 167/279 (59%), Positives = 216/279 (77%), Gaps = 5/279 (1%)

Query: 296 SGAKRPYDSGVCARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVG 355
           S  K  Y+ G+CARRL  Y+Y Q+ RP DN+I +WRKFVAEYY+P AKK+WC+S+Y +  
Sbjct: 314 SPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYYAPNAKKKWCVSMYGS-S 372

Query: 356 HHALGVFPQAAMDAWHCDICGSKSGKGFEATSEVLPRLNEIKFGSGVIDELLFLDLPREY 415
               GVFPQ   D WHC+IC  K G+GFEAT EVLPRL +IK+ SG ++ELL++D+PREY
Sbjct: 373 RQTTGVFPQ---DVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREY 429

Query: 416 RFPSGVLMLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLV 475
              SG ++L+YAKA+QESV+EQLRVVR+GQLRI+F+ DLKI SWEFCARRHEEL+PRRL+
Sbjct: 430 HNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLL 489

Query: 476 APQVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRHLAKSLELQSLNDLGFS 535
            PQV+Q+  VAQK Q+ + ++ +   S  +LQ N NM + + R LAK+LE+  +NDLG++
Sbjct: 490 IPQVSQIGAVAQKYQA-LTQNATPNASAPELQNNCNMFVASARQLAKALEVPLVNDLGYT 548

Query: 536 KRYVRCLQIAEVVNSMKDLIDFGREHKIGAIESLKTYPR 574
           KRYVRCLQI+EVVNSMKDLID+ RE   G +ESL  +PR
Sbjct: 549 KRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPR 587


>Medtr3g089075.1 | transcriptional corepressor SEUSS-like protein |
           HC | chr3:40781704-40775494 | 20130731
          Length = 891

 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 167/279 (59%), Positives = 216/279 (77%), Gaps = 5/279 (1%)

Query: 296 SGAKRPYDSGVCARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVG 355
           S  K  Y+ G+CARRL  Y+Y Q+ RP DN+I +WRKFVAEYY+P AKK+WC+S+Y +  
Sbjct: 314 SPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYYAPNAKKKWCVSMYGS-S 372

Query: 356 HHALGVFPQAAMDAWHCDICGSKSGKGFEATSEVLPRLNEIKFGSGVIDELLFLDLPREY 415
               GVFPQ   D WHC+IC  K G+GFEAT EVLPRL +IK+ SG ++ELL++D+PREY
Sbjct: 373 RQTTGVFPQ---DVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREY 429

Query: 416 RFPSGVLMLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLV 475
              SG ++L+YAKA+QESV+EQLRVVR+GQLRI+F+ DLKI SWEFCARRHEEL+PRRL+
Sbjct: 430 HNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLL 489

Query: 476 APQVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRHLAKSLELQSLNDLGFS 535
            PQV+Q+  VAQK Q+ + ++ +   S  +LQ N NM + + R LAK+LE+  +NDLG++
Sbjct: 490 IPQVSQIGAVAQKYQA-LTQNATPNASAPELQNNCNMFVASARQLAKALEVPLVNDLGYT 548

Query: 536 KRYVRCLQIAEVVNSMKDLIDFGREHKIGAIESLKTYPR 574
           KRYVRCLQI+EVVNSMKDLID+ RE   G +ESL  +PR
Sbjct: 549 KRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPR 587


>Medtr1g029400.1 | transcriptional corepressor SEUSS-like protein |
           HC | chr1:10071239-10080236 | 20130731
          Length = 911

 Score =  375 bits (964), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 167/282 (59%), Positives = 219/282 (77%), Gaps = 5/282 (1%)

Query: 296 SGAKRPYDSGVCARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVG 355
           S AK  Y+ G+CARRL  Y+Y Q+ RP DN+I +WRKFVAEY++P AKK+WC+S+Y + G
Sbjct: 324 SPAKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGS-G 382

Query: 356 HHALGVFPQAAMDAWHCDICGSKSGKGFEATSEVLPRLNEIKFGSGVIDELLFLDLPREY 415
               GVFPQ   D WHC+IC  K G+GFEAT+EVLPRL +IK+ SG ++ELL++D+PREY
Sbjct: 383 RQTTGVFPQ---DIWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREY 439

Query: 416 RFPSGVLMLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLV 475
              SG ++L+YAKA+QESV+EQLRVVR+GQLRI+F+ DLKI SWEFCARRHEEL+PRRL+
Sbjct: 440 HNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLL 499

Query: 476 APQVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRHLAKSLELQSLNDLGFS 535
            PQV+QL  VAQK Q+    + ++  S  +LQ N N+ + + R LAK+LE+  +NDLG++
Sbjct: 500 IPQVSQLGTVAQKYQACTQNAAANQ-SVPELQNNCNLFVASARQLAKALEVPLVNDLGYT 558

Query: 536 KRYVRCLQIAEVVNSMKDLIDFGREHKIGAIESLKTYPRHAT 577
           KRYVRCLQI+EVVNSMKDLID+ RE   G ++SL  +PR  +
Sbjct: 559 KRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTS 600


>Medtr1g029400.2 | transcriptional corepressor SEUSS-like protein |
           HC | chr1:10071239-10080236 | 20130731
          Length = 911

 Score =  375 bits (964), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 167/282 (59%), Positives = 219/282 (77%), Gaps = 5/282 (1%)

Query: 296 SGAKRPYDSGVCARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVG 355
           S AK  Y+ G+CARRL  Y+Y Q+ RP DN+I +WRKFVAEY++P AKK+WC+S+Y + G
Sbjct: 324 SPAKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGS-G 382

Query: 356 HHALGVFPQAAMDAWHCDICGSKSGKGFEATSEVLPRLNEIKFGSGVIDELLFLDLPREY 415
               GVFPQ   D WHC+IC  K G+GFEAT+EVLPRL +IK+ SG ++ELL++D+PREY
Sbjct: 383 RQTTGVFPQ---DIWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREY 439

Query: 416 RFPSGVLMLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLV 475
              SG ++L+YAKA+QESV+EQLRVVR+GQLRI+F+ DLKI SWEFCARRHEEL+PRRL+
Sbjct: 440 HNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLL 499

Query: 476 APQVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRHLAKSLELQSLNDLGFS 535
            PQV+QL  VAQK Q+    + ++  S  +LQ N N+ + + R LAK+LE+  +NDLG++
Sbjct: 500 IPQVSQLGTVAQKYQACTQNAAANQ-SVPELQNNCNLFVASARQLAKALEVPLVNDLGYT 558

Query: 536 KRYVRCLQIAEVVNSMKDLIDFGREHKIGAIESLKTYPRHAT 577
           KRYVRCLQI+EVVNSMKDLID+ RE   G ++SL  +PR  +
Sbjct: 559 KRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTS 600