Miyakogusa Predicted Gene

Lj5g3v2027100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2027100.1 Non Characterized Hit- tr|I1NGR1|I1NGR1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37556
PE,82.48,0,SUBFAMILY NOT NAMED,NULL; RHOMBOID-RELATED,Peptidase S54,
rhomboid; no description,NULL; Rhomboid-li,CUFF.56423.1
         (336 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g498280.1 | inactive rhomboid-like protein | HC | chr7:392...   376   e-104
Medtr1g101310.1 | inactive rhomboid-like protein | HC | chr1:457...   287   9e-78
Medtr2g097210.1 | inactive rhomboid-like protein | HC | chr2:415...   285   5e-77
Medtr4g021755.1 | inactive rhomboid-like protein | HC | chr4:721...   285   5e-77
Medtr2g097210.2 | inactive rhomboid-like protein | HC | chr2:415...   244   9e-65
Medtr7g061780.1 | S54 family peptidase | HC | chr7:22356603-2235...   236   2e-62
Medtr2g103600.1 | S54 family peptidase | HC | chr2:44609705-4460...   223   3e-58
Medtr3g073530.1 | inactive rhomboid-like protein | HC | chr3:331...   181   1e-45
Medtr2g088315.1 | S54 family peptidase | LC | chr2:37209285-3720...    72   7e-13
Medtr2g088290.1 | S54 family peptidase | LC | chr2:37206799-3720...    56   5e-08

>Medtr7g498280.1 | inactive rhomboid-like protein | HC |
           chr7:39278810-39283545 | 20130731
          Length = 326

 Score =  376 bits (965), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/309 (62%), Positives = 215/309 (69%), Gaps = 1/309 (0%)

Query: 28  TYSAPPASAYVYNPETHWTSWLVPLFVVANIAVFVVTMYINNCHKHNLGFQGDCIAGFLG 87
            Y+ PP S+  Y+PET WTSWLVP+FVVAN+ VFVV MYINNC   NLGF G C+  FLG
Sbjct: 19  AYAVPPTSSG-YDPETSWTSWLVPMFVVANLVVFVVAMYINNCPSKNLGFDGACVLKFLG 77

Query: 88  RFSFQPLQENPLLGPSSSALTKMGGLKWDNVVNHHQGWRLVTCIWLHAGVIHLLANMLSL 147
           RFSFQPL+ENPLLGPSS  LTKMG LKWD VVNHHQGWRLV+CIWLHAG+IHL ANM+SL
Sbjct: 78  RFSFQPLKENPLLGPSSETLTKMGALKWDAVVNHHQGWRLVSCIWLHAGIIHLAANMISL 137

Query: 148 VFIGIRLEQQFGFLRIGIIYLVSGFGGSVLSCLFLGNHISVXXXXXXXXXXXXXXXELIT 207
           VFIGIRLEQQFGF+RIGI+YLVSGFGGS+LS LF+   ISV               ELIT
Sbjct: 138 VFIGIRLEQQFGFVRIGIVYLVSGFGGSILSALFIRKSISVGASGALFGLLGAMLSELIT 197

Query: 208 NWTIYSNKVMXXXXXXXXXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXPRPQFGWLE 267
           NW+IY+NKV                   PHVDNFAH               PRPQFGWL 
Sbjct: 198 NWSIYTNKVAALMTLLFIIVINLVIGMLPHVDNFAHIGGFLTGFLLGFIFLPRPQFGWLA 257

Query: 268 QRHLPAGVRLKSKYKAYQYXXXXXXXXXXXXXXTVALVMLLRGENGNDHCHWCRYITCVP 327
           QRH+PAGVRLKSKYK YQY               + LVMLLRGE+G DHCHWC Y+TCVP
Sbjct: 258 QRHVPAGVRLKSKYKVYQYVLWVVSLVLLIAGLCIGLVMLLRGESGYDHCHWCHYLTCVP 317

Query: 328 TSKWECSDT 336
           TSKW+C D+
Sbjct: 318 TSKWKCDDS 326


>Medtr1g101310.1 | inactive rhomboid-like protein | HC |
           chr1:45761926-45764419 | 20130731
          Length = 319

 Score =  287 bits (735), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 167/340 (49%), Positives = 190/340 (55%), Gaps = 33/340 (9%)

Query: 1   MERKRDVESGVXXXXXXXXXXXXXXXXTYSAPPASAYVYNPETHWTS--WLVPLFVVANI 58
           M  +RDVESG                         +YVY  ETH  S  WLVP FV  NI
Sbjct: 6   MNPRRDVESG-------------------RTKNNCSYVYVAETHRESCSWLVPAFVFVNI 46

Query: 59  AVFVVTMYINNCHKHNLGFQGD---CIAGFLGRFSFQPLQENPLLGPSSSALTKMGGLKW 115
            VF+V M INNC     GF      C+A FL RFSFQP +ENPLLGPSS  L KMG L+W
Sbjct: 47  VVFIVVMGINNCPNTTFGFHKHHHHCVARFLHRFSFQPFRENPLLGPSSLTLIKMGALRW 106

Query: 116 DNVVNHHQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFLRIGIIYLVSGFGGS 175
            NVV+ HQ WRL TCIWLHAG+IHLL+NML LV IGIRLEQQFGF++IG+IYL+SGFGGS
Sbjct: 107 VNVVHQHQEWRLFTCIWLHAGIIHLLSNMLCLVLIGIRLEQQFGFVKIGLIYLLSGFGGS 166

Query: 176 VLSCLFLGNHISVXXXXXXXXXXXXXXXELITNWTIYSNKVMXXXXXXXXXXXXXXXXXX 235
           V S +F+ N ISV               EL+TNWTIYSNKVM                  
Sbjct: 167 VFSSIFIRNSISVGASSALFGLLGAMISELLTNWTIYSNKVMALLTLLVMIAINLTIGLL 226

Query: 236 PHVDNFAHXXXXXXXXXXXXXXXPRPQFGWLEQRHLPAGVRLKSKYKAYQYXXXXXXXXX 295
           P VDN AH               PRPQ+          GV  KSKY AYQ+         
Sbjct: 227 PRVDNLAHIGGLVVGFLLGFILLPRPQYD---------GVLRKSKYNAYQFVLGIVSLVL 277

Query: 296 XXXXXTVALVMLLRGENGNDHCHWCRYITCVPTSKWECSD 335
                +  LVML RGENG DHCHWC Y+TCVP+S+WEC+ 
Sbjct: 278 LTAGLSFGLVMLFRGENGYDHCHWCHYLTCVPSSRWECNS 317


>Medtr2g097210.1 | inactive rhomboid-like protein | HC |
           chr2:41509279-41506033 | 20130731
          Length = 383

 Score =  285 bits (728), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 141/296 (47%), Positives = 176/296 (59%), Gaps = 6/296 (2%)

Query: 44  HWTSWLVPLFVVANIAVFVVTMYINNCHKHNLGFQGDCIAGFLGRFSFQPLQENPLLGPS 103
            W  WL+P FV AN+ VF+ TMY+N+C ++   F G C+A FLGRFSFQPL+ENPL GPS
Sbjct: 43  QWVPWLIPTFVFANVVVFIFTMYVNDCPEN--AFHGTCVAPFLGRFSFQPLKENPLFGPS 100

Query: 104 SSALTKMGGLKWDNVVNHHQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFLRI 163
           S  L KMG L+ D VV+ H+GWRLV+CIWLH G IH+LANMLSL+FIGIRLEQ+FGF+RI
Sbjct: 101 SFTLQKMGALEVDKVVHEHEGWRLVSCIWLHGGAIHVLANMLSLLFIGIRLEQEFGFVRI 160

Query: 164 GIIYLVSGFGGSVLSCLFLGNHISVXXXXXXXXXXXXXXXELITNWTIYSNKVMXXXXXX 223
           G +Y++SGFGGS+LS LF+   ISV               EL  NWTIY+NK+       
Sbjct: 161 GFLYVISGFGGSLLSSLFIQTGISVGASGALFGLLGGMLSELFINWTIYANKMAALLTLI 220

Query: 224 XXXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXPRPQFGWLEQRHLPAGVRL----KS 279
                       PHVDNFAH                RPQF W+ Q+   +G       ++
Sbjct: 221 IIVVINLAVGVLPHVDNFAHLGGFGSGFFLGFVVLIRPQFKWISQQQSKSGSHAFSVKQN 280

Query: 280 KYKAYQYXXXXXXXXXXXXXXTVALVMLLRGENGNDHCHWCRYITCVPTSKWECSD 335
           KY  YQY                 +V+L RG N N+ C WC Y++CVPTSKW C +
Sbjct: 281 KYLPYQYVLWVLSFLLLIAGFIAGMVLLFRGVNLNERCSWCHYLSCVPTSKWSCQE 336


>Medtr4g021755.1 | inactive rhomboid-like protein | HC |
           chr4:7215110-7210484 | 20130731
          Length = 399

 Score =  285 bits (728), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 144/292 (49%), Positives = 179/292 (61%), Gaps = 7/292 (2%)

Query: 45  WTSWLVPLFVVANIAVFVVTMYINNCHKHNLGFQGDCIAGFLGRFSFQPLQENPLLGPSS 104
           W  WL+P FVVANI VFV+TMY+NNC K+++     CIA FL RF+FQPL+ENPLLGPSS
Sbjct: 42  WFPWLLPFFVVANIVVFVITMYVNNCPKNSV----SCIARFLKRFAFQPLKENPLLGPSS 97

Query: 105 SALTKMGGLKWDNVVNHHQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFLRIG 164
             L KMG L  D VV+ HQGWRL+TC+WLH GV HLLANML ++FIGIRLEQ+FGF+ IG
Sbjct: 98  LTLQKMGALDVDKVVHGHQGWRLITCMWLHGGVFHLLANMLGILFIGIRLEQEFGFVLIG 157

Query: 165 IIYLVSGFGGSVLSCLFLGNHISVXXXXXXXXXXXXXXXELITNWTIYSNKVMXXXXXXX 224
           +++++SGFGGS+LS LF+ ++ISV               ELITNW++Y NK+        
Sbjct: 158 LLFVISGFGGSLLSALFIQSNISVGASGALFGLLGAMLSELITNWSMYDNKIAALFTLVI 217

Query: 225 XXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXPRPQFGWLEQRHLP---AGVRLKSKY 281
                      PHVDNFAH                RPQFGW+ QR+     +  R   K+
Sbjct: 218 IIVVNLAIGILPHVDNFAHIGGFLAGFLLGFVFLIRPQFGWVNQRYARVEYSPTRATPKF 277

Query: 282 KAYQYXXXXXXXXXXXXXXTVALVMLLRGENGNDHCHWCRYITCVPTSKWEC 333
           K YQ               +  LV LL G + NDHC WC Y++CVPTSKW C
Sbjct: 278 KKYQCILWVLSLIILIVGLSGGLVALLSGIDANDHCSWCHYLSCVPTSKWNC 329


>Medtr2g097210.2 | inactive rhomboid-like protein | HC |
           chr2:41509232-41506033 | 20130731
          Length = 300

 Score =  244 bits (623), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 152/247 (61%), Gaps = 6/247 (2%)

Query: 44  HWTSWLVPLFVVANIAVFVVTMYINNCHKHNLGFQGDCIAGFLGRFSFQPLQENPLLGPS 103
            W  WL+P FV AN+ VF+ TMY+N+C ++   F G C+A FLGRFSFQPL+ENPL GPS
Sbjct: 43  QWVPWLIPTFVFANVVVFIFTMYVNDCPEN--AFHGTCVAPFLGRFSFQPLKENPLFGPS 100

Query: 104 SSALTKMGGLKWDNVVNHHQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFLRI 163
           S  L KMG L+ D VV+ H+GWRLV+CIWLH G IH+LANMLSL+FIGIRLEQ+FGF+RI
Sbjct: 101 SFTLQKMGALEVDKVVHEHEGWRLVSCIWLHGGAIHVLANMLSLLFIGIRLEQEFGFVRI 160

Query: 164 GIIYLVSGFGGSVLSCLFLGNHISVXXXXXXXXXXXXXXXELITNWTIYSNKVMXXXXXX 223
           G +Y++SGFGGS+LS LF+   ISV               EL  NWTIY+NK+       
Sbjct: 161 GFLYVISGFGGSLLSSLFIQTGISVGASGALFGLLGGMLSELFINWTIYANKMAALLTLI 220

Query: 224 XXXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXPRPQFGWLEQRHLPAGVRL----KS 279
                       PHVDNFAH                RPQF W+ Q+   +G       ++
Sbjct: 221 IIVVINLAVGVLPHVDNFAHLGGFGSGFFLGFVVLIRPQFKWISQQQSKSGSHAFSVKQN 280

Query: 280 KYKAYQY 286
           KY  YQY
Sbjct: 281 KYLPYQY 287


>Medtr7g061780.1 | S54 family peptidase | HC |
           chr7:22356603-22354034 | 20130731
          Length = 335

 Score =  236 bits (602), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 132/282 (46%), Positives = 165/282 (58%), Gaps = 6/282 (2%)

Query: 45  WTSWLVPLFVVANIAVFVVTMYINNCHKHNLGFQGDCIAGFLGRFSFQPLQENPLLGPSS 104
           W  WL+P FV+ N+ VF++TMY N+C  +++     CIA FLGRFSFQP  ENPLLGPS 
Sbjct: 26  WIPWLIPFFVIVNVIVFIITMYENDCPNNSV----VCIARFLGRFSFQPFHENPLLGPSL 81

Query: 105 SALTKMGGLKWDNVVNHHQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFLRIG 164
             LT MG L    VV  HQGWRL+TC+WLH GV HLLANML ++ +GIRLEQ FGF+ IG
Sbjct: 82  LTLTSMGALDVHQVVYRHQGWRLMTCMWLHGGVFHLLANMLGILVVGIRLEQDFGFVLIG 141

Query: 165 IIYLVSGFGGSVLSCLFLGNHISVXXXXXXXXXXXXXXXELITNWTIYSNKVMXXXXXXX 224
           ++Y++SGFGGS+LS LF+   ISV               ELITNW+IY  ++        
Sbjct: 142 VLYVISGFGGSLLSSLFIQQRISVGASSALFGLLGAMLSELITNWSIYEKRLGTLITLVS 201

Query: 225 XXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXPRPQFGWLEQRH-LPAGVRL-KSKYK 282
                      PHVDNFAH                RPQFGW++Q++  PA   L KSK+K
Sbjct: 202 IIVINLAVGIFPHVDNFAHIGGFISGFLLGFVFLIRPQFGWIKQKYATPAYPSLVKSKFK 261

Query: 283 AYQYXXXXXXXXXXXXXXTVALVMLLRGENGNDHCHWCRYIT 324
            YQ               T+ LV LLRG + NDHC WC Y++
Sbjct: 262 IYQCISWLLALILLIVGFTLGLVALLRGVDANDHCSWCHYLS 303


>Medtr2g103600.1 | S54 family peptidase | HC |
           chr2:44609705-44607548 | 20130731
          Length = 316

 Score =  223 bits (567), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/281 (44%), Positives = 160/281 (56%), Gaps = 13/281 (4%)

Query: 44  HWTSWLVPLFVVANIAVFVVTMYINNCHKH-NLGFQGDCI-AGFLGRFSFQPLQENPLLG 101
            W SWLVPLF +ANIA+FV +MYIN+C  + N   + DC+   +LG+FSFQP  ENPLLG
Sbjct: 30  QWFSWLVPLFFLANIAMFVYSMYINDCPGYLN---EDDCLWYQYLGKFSFQPFNENPLLG 86

Query: 102 PSSSALTKMGGLKWDNVVNHHQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFL 161
           PS   L  +G L+ D VV  ++ WR +TC++LHAGVIHLLANM SL+FIG+RLE +FGFL
Sbjct: 87  PSVRTLRVLGALERDLVVGENEVWRFITCMFLHAGVIHLLANMFSLLFIGVRLENEFGFL 146

Query: 162 RIGIIYLVSGFGGSVLSCLFLG-----NHISVXXXXXXXXXXXXXXXELITNWTIYSNKV 216
           +IG++YL+SGFGGS+LS L +G     N +SV               EL+TNWTIY NK 
Sbjct: 147 KIGVLYLLSGFGGSLLSILHMGDVKAPNTVSVGASGALFGLLGAMLSELLTNWTIYLNKC 206

Query: 217 MXXXXXXXXXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXPRPQFGWLEQRHLPAG-- 274
                              PHVDN AH                RPQFG++  +++P G  
Sbjct: 207 AALTSLLLIIGLNLAVGFIPHVDNSAHIGGFLSGFFLGFVILMRPQFGYVNNKYIPPGYD 266

Query: 275 VRLKSKYKAYQYXXXXXXXXXXXXXXTVALVMLLRGENGND 315
            + KSKYK YQY                 L  L  GE+ ND
Sbjct: 267 AKRKSKYKGYQYFFLVLSVITLLIGYAYGLATLYIGES-ND 306


>Medtr3g073530.1 | inactive rhomboid-like protein | HC |
           chr3:33161562-33158511 | 20130731
          Length = 379

 Score =  181 bits (458), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/296 (34%), Positives = 148/296 (50%), Gaps = 10/296 (3%)

Query: 47  SWLVPLFVVANIAVFVVTMYINNCHKHNLGFQGDCIAGFLGRFSFQPLQENPLLGPSSSA 106
           +W++ + V+  +  F+ TM +N+C  ++    GDC    LGRFSFQPL ENPLLGPS S 
Sbjct: 42  TWVISVMVLIQLGFFIATMLVNDCFTNS---HGDCTFPSLGRFSFQPLAENPLLGPSMSK 98

Query: 107 LTKMGGLKWDNVVNHHQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFLRIGII 166
           L +MG L+ + +   HQ WRL T  +LHAG+ HL+ N+ S++++GIRLEQ+FG LRIGI+
Sbjct: 99  LDEMGALQKNFLTERHQTWRLFTFPFLHAGLFHLVINLCSVIYVGIRLEQEFGPLRIGIV 158

Query: 167 YLVSGFGGSVLSCLFLGNHISVXXXXXXXXXXXXXXXELITNWTIYSNKVMXXXXXXXXX 226
           Y++S F G++++ LFL N   V               EL+ NW  ++ K+          
Sbjct: 159 YILSAFVGALMASLFLQNIPVVGSSGALFGLLGALLSELVWNWKYHTKKISEVASFVFIF 218

Query: 227 XXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXPRPQF-------GWLEQRHLPAGVRLKS 279
                    P+VDNF+                  PQF       G      L + ++LK 
Sbjct: 219 VCNFLLGFLPYVDNFSSIGGFISGFLLGTVLLFAPQFQQVTPSKGDQIDYDLKSYIKLKL 278

Query: 280 KYKAYQYXXXXXXXXXXXXXXTVALVMLLRGENGNDHCHWCRYITCVPTSKWECSD 335
           K K  +                  L+ +L G N N +C WC Y+ C+P + W C D
Sbjct: 279 KQKLDRPVSRIVSLILFTLLLAGCLLAVLYGININSYCTWCPYVDCIPFTSWHCKD 334


>Medtr2g088315.1 | S54 family peptidase | LC |
           chr2:37209285-37209034 | 20130731
          Length = 83

 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 53/79 (67%)

Query: 110 MGGLKWDNVVNHHQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFLRIGIIYLV 169
           MG + +      H  +RL TC+WLHAGVI LL NML++++  I LE++FG++RI I++ +
Sbjct: 1   MGAMYFQKSDRLHHAYRLFTCLWLHAGVIDLLLNMLNILYYYIYLEKKFGYIRIAILHTM 60

Query: 170 SGFGGSVLSCLFLGNHISV 188
           SG G ++ S L +   +SV
Sbjct: 61  SGMGSNLFSALCIPTSVSV 79


>Medtr2g088290.1 | S54 family peptidase | LC |
           chr2:37206799-37206087 | 20130731
          Length = 220

 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 32/109 (29%)

Query: 80  DCIAGFLGRFSFQPLQENPLLGPSSSALTKMGGLKWDNVVNHHQGWRLVTCIWLHAGVIH 139
            C+A FLG  SFQP+ +NPLLG S   L KMG + +      H                 
Sbjct: 13  SCLASFLGILSFQPITQNPLLGSSPLTLVKMGTMYFKKSDRLHH---------------- 56

Query: 140 LLANMLSLVFIGIRLEQQFGFLRIGIIYLVSGFGGSVLSCLFLGNHISV 188
                           ++FG++RI I++ +SG G S+ S LF+   +SV
Sbjct: 57  ----------------KKFGYVRIEILHTMSGMGSSLFSALFIPTSVSV 89