Miyakogusa Predicted Gene

Lj5g3v2013930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2013930.1 Non Characterized Hit- tr|K4AUE7|K4AUE7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.8,4e-17,PROTEIN F12F6.8, PARTIALLY CONFIRMED BY TRANSCRIPT
EVIDENCE,NULL; F-BOX/LEUCINE RICH REPEAT PROTEIN,,CUFF.56495.1
         (166 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g100697.1 | F-box/LRR plant protein | HC | chr1:45641465-4...   296   5e-81
Medtr1g100707.1 | F-box/LRR plant protein | HC | chr1:45647355-4...   288   2e-78
Medtr1g100713.1 | F-box/LRR plant protein | LC | chr1:45652977-4...   209   1e-54
Medtr0013s0100.1 | F-box/LRR plant protein | LC | scaffold0013:4...   201   3e-52
Medtr4g099030.1 | F-box/LRR plant protein | LC | chr4:40949369-4...   180   6e-46
Medtr7g074430.1 | F-box/LRR plant protein | LC | chr7:27812967-2...    77   1e-14
Medtr7g074410.1 | F-box/LRR plant protein | LC | chr7:27805516-2...    74   7e-14
Medtr7g075970.1 | F-box/LRR plant protein | LC | chr7:28551963-2...    72   3e-13
Medtr1g029330.1 | F-box/LRR plant protein | LC | chr1:10037420-1...    62   2e-10

>Medtr1g100697.1 | F-box/LRR plant protein | HC |
           chr1:45641465-45643912 | 20130731
          Length = 305

 Score =  296 bits (758), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 138/166 (83%), Positives = 154/166 (92%)

Query: 1   MCKAIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFLPKL 60
           MCKAIR WKELES+TMP+IANPPY L+EI+T+CKNFSELKIMGPCDI FAS+LAAF+PKL
Sbjct: 140 MCKAIRCWKELESLTMPSIANPPYFLEEIATNCKNFSELKIMGPCDIFFASTLAAFVPKL 199

Query: 61  KVLSLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHKGIIREIDQTIRQKAS 120
           + LSLRCS L++DVLILILDSL+HLEVLNISHC+L+E LPPPQHK II EID TIRQKAS
Sbjct: 200 RFLSLRCSTLYRDVLILILDSLEHLEVLNISHCILMECLPPPQHKKIINEIDSTIRQKAS 259

Query: 121 RLRSFITCMDDSCVMCQRTRTDEGLVRWYKYEEGLWKTDEVRSLAL 166
           RLR FITCMDDSC+MCQRTRTDEG+VRWYKYEEG WK DEV+SLAL
Sbjct: 260 RLREFITCMDDSCIMCQRTRTDEGIVRWYKYEEGFWKEDEVKSLAL 305


>Medtr1g100707.1 | F-box/LRR plant protein | HC |
           chr1:45647355-45648673 | 20130731
          Length = 305

 Score =  288 bits (737), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 132/166 (79%), Positives = 148/166 (89%)

Query: 1   MCKAIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFLPKL 60
           MCKAIR WKELES+TMPTI N PY LDEI+T+CKNFSELKIMGPC+I FAS LA + PKL
Sbjct: 140 MCKAIRSWKELESLTMPTIENAPYFLDEIATNCKNFSELKIMGPCNIFFASILATYFPKL 199

Query: 61  KVLSLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHKGIIREIDQTIRQKAS 120
           +VLSLRCS L++DVLI ILDSL+HLEVLNISHC+L+E LPPP +K II EID TIRQKAS
Sbjct: 200 RVLSLRCSTLYRDVLIFILDSLEHLEVLNISHCILMEGLPPPHYKKIINEIDSTIRQKAS 259

Query: 121 RLRSFITCMDDSCVMCQRTRTDEGLVRWYKYEEGLWKTDEVRSLAL 166
           RLR FITCMDDSC+MCQRTRTDEG++RWYKYEEG WK DEV+SLAL
Sbjct: 260 RLREFITCMDDSCIMCQRTRTDEGIIRWYKYEEGFWKVDEVKSLAL 305


>Medtr1g100713.1 | F-box/LRR plant protein | LC |
           chr1:45652977-45656651 | 20130731
          Length = 318

 Score =  209 bits (531), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 106/168 (63%), Positives = 125/168 (74%), Gaps = 4/168 (2%)

Query: 3   KAIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFLPKLKV 62
           KAIRGWK+LESMTMP I NP Y+ +EIS HCKNF ELK+MG   I FA +L   LP LKV
Sbjct: 151 KAIRGWKDLESMTMPGIYNPRYVFEEISKHCKNFRELKVMGCIGIQFAYALTRCLPNLKV 210

Query: 63  LSLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHK----GIIREIDQTIRQK 118
           LSLRCS L K  LILIL+ L+HLEVLNISH   VE +P P ++        +ID  I +K
Sbjct: 211 LSLRCSGLSKRALILILNKLKHLEVLNISHSCHVELVPDPYYEIEEYKFTGDIDPIIIEK 270

Query: 119 ASRLRSFITCMDDSCVMCQRTRTDEGLVRWYKYEEGLWKTDEVRSLAL 166
           ASRLR F TC+ +SC+MC+RTR D+GLVRW+KYEEG+WK DEV SLAL
Sbjct: 271 ASRLREFHTCIKESCIMCKRTRDDDGLVRWFKYEEGIWKHDEVSSLAL 318


>Medtr0013s0100.1 | F-box/LRR plant protein | LC |
           scaffold0013:41109-38397 | 20130731
          Length = 315

 Score =  201 bits (510), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 102/168 (60%), Positives = 122/168 (72%), Gaps = 2/168 (1%)

Query: 1   MCKAIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFLPKL 60
           M KAI+GWK+LESMTMPTI  P Y+  EIS  CK F ELK+MG  ++ FASSL   LP L
Sbjct: 148 MRKAIKGWKDLESMTMPTIEYPNYIFQEISRSCKKFRELKVMGRLNLQFASSLTINLPNL 207

Query: 61  KVLSLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHK-GIIREID-QTIRQK 118
           +VLS+RCS L K+ LILILD LQ+LEVLNISH   VEP P  +     I ++D   I +K
Sbjct: 208 RVLSIRCSGLVKEALILILDRLQYLEVLNISHSCFVEPFPDSEEGYRFISDVDTDIISKK 267

Query: 119 ASRLRSFITCMDDSCVMCQRTRTDEGLVRWYKYEEGLWKTDEVRSLAL 166
           AS+LR F TCM +SC+MC RTR D GL RW++YEEG+WK DEV SLAL
Sbjct: 268 ASKLREFHTCMKESCIMCHRTRVDCGLPRWFRYEEGIWKHDEVSSLAL 315


>Medtr4g099030.1 | F-box/LRR plant protein | LC |
           chr4:40949369-40947873 | 20130731
          Length = 303

 Score =  180 bits (456), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 94/168 (55%), Positives = 116/168 (69%), Gaps = 15/168 (8%)

Query: 1   MCKAIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFLPKL 60
           + +AIR W  LESMTMP    P Y+ +EI+ HCKNF ELK++            AFLP L
Sbjct: 149 IVRAIRVWTNLESMTMPCTEYPGYVFEEITKHCKNFRELKVI------------AFLPNL 196

Query: 61  KVLSLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHKGII--REIDQTIRQK 118
           KVLSLRCS L K+ LILILD L+ LEVLNISH   V PLP P H+G +    ID  I +K
Sbjct: 197 KVLSLRCSGLSKEALILILDELKDLEVLNISHSCHVVPLPYP-HEGYMFSSGIDPIIIEK 255

Query: 119 ASRLRSFITCMDDSCVMCQRTRTDEGLVRWYKYEEGLWKTDEVRSLAL 166
            SRL  F TCM++SC+MCQRT+ D+GL RW++YE+G+WK DE+ SLAL
Sbjct: 256 GSRLLDFYTCMEESCIMCQRTKADDGLPRWFRYEDGIWKDDEISSLAL 303


>Medtr7g074430.1 | F-box/LRR plant protein | LC |
           chr7:27812967-27815063 | 20130731
          Length = 301

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 4/162 (2%)

Query: 4   AIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFLPKLKVL 63
           A+R W+ LES+T+ ++ +     D +  +C +   LKI    +   A +L  + P LKVL
Sbjct: 143 AMRSWRGLESITITSVVHHINFFDAVRKYCMDIISLKITCRFEQYEARALVNYTPNLKVL 202

Query: 64  SLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHKGIIREIDQTIRQKASRLR 123
           S+R   +    L  +L++L+HLEV+N+SH ++V+ L     +  + ++   +        
Sbjct: 203 SIRNMTVNMGGLCHVLNNLEHLEVVNLSHSLIVDKLDDELQQYSVDDVQSRVNNSC---- 258

Query: 124 SFITCMDDSCVMCQRTRTDEGLVRWYKYEEGLWKTDEVRSLA 165
             ITC   +C+ C+           +   E +W+ DE+RSL+
Sbjct: 259 KLITCQIRTCLWCKTPFARNPRRMPHGTLEDIWRDDEIRSLS 300


>Medtr7g074410.1 | F-box/LRR plant protein | LC |
           chr7:27805516-27807324 | 20130731
          Length = 301

 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 14/167 (8%)

Query: 4   AIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFLPKLKVL 63
           A+R W++L+S+T+ ++ +   + + I  +CKN   LKI G  +   A +L    P LKVL
Sbjct: 143 AMRSWRDLQSITITSVVHHFNIFEAIRKYCKNIVSLKITGGFEQYEARALVKCTPNLKVL 202

Query: 64  SLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHKGIIREIDQTIRQKASRLR 123
           S+R   +    L  +L++L+HLEV+N+SH ++V+ +    H   +  ID  +       R
Sbjct: 203 SIRKMKVNMGGLCHVLNNLEHLEVVNLSHSLIVDKVDGAFH---LYSIDDVLS------R 253

Query: 124 SFITCMDDSCVMCQRTRTDEGLVRW-----YKYEEGLWKTDEVRSLA 165
             I+C   +C +    R      R      +   E +W+ DE+ SL+
Sbjct: 254 VNISCKLITCQITTSHRCKNPFARNPRRMPHGSLENIWREDEISSLS 300


>Medtr7g075970.1 | F-box/LRR plant protein | LC |
           chr7:28551963-28550984 | 20130731
          Length = 296

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 20/170 (11%)

Query: 4   AIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFLPKLKVL 63
           A+R W+ LES+T+ T        D I  HCKN + LK         A SL  + P LK L
Sbjct: 138 AMRSWRCLESITITTSIYDFKFFDAIGKHCKNITSLKFACFFGQEEAESLVKYTPNLKFL 197

Query: 64  SLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPP--PQHKGIIREIDQTIRQKASR 121
           S R   +    L  +L+SL+HL+V+N+ H  +++        H+ ++  ++ + +     
Sbjct: 198 SFRDMPINHRALCRVLNSLEHLDVVNLCHTDIIDYGLKLYSSHRNLLNRMNISCK----- 252

Query: 122 LRSFITCMDDSCVMCQR------TRTDEGLVRWYKYEEGLWKTDEVRSLA 165
               ITC   SC+MC+       TR   G++     E   W+ DE+ SLA
Sbjct: 253 ---IITCEKRSCLMCKNESTNDPTRQPSGILE----EIRNWREDEIDSLA 295


>Medtr1g029330.1 | F-box/LRR plant protein | LC |
           chr1:10037420-10038783 | 20130731
          Length = 302

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 4/162 (2%)

Query: 4   AIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFLPKLKVL 63
           A++ W  LES+T+  +     +   IS +C    ELK      I  A  +  + P LK+L
Sbjct: 144 AMKSWDSLESITITAMVKTSCIFSAISKYCMTIYELKFTNYFGINDADLVVQYTPNLKLL 203

Query: 64  SLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHKGIIREIDQTIRQKASRLR 123
           S+R  ++    L  IL+SL+ LEV+NI H  + + +        +R++   +      LR
Sbjct: 204 SVRNIMVNLRALCNILNSLEKLEVVNICHGFIWDRVEGAVKAYTVRDLRNHLSLPC--LR 261

Query: 124 SFITCMDDSCVMCQRTRTDEGLVRWYKYEEGLWKTDEVRSLA 165
             + C    C+ C     ++ +   +   E +W+ DE+ SLA
Sbjct: 262 KLMFCNRRRCLRC--INGNDPVRIPFGVFEDIWREDEISSLA 301