Miyakogusa Predicted Gene

Lj5g3v2013640.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2013640.1 Non Characterized Hit- tr|E0CV37|E0CV37_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.31,0.000002,seg,NULL; Retrovirus zinc finger-like domains,Zinc
finger, CCHC-type; zinc finger,Zinc finger, CCHC-,CUFF.56370.1
         (657 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g101190.2 | cofilin/actin-depolymerizing factor-like prote...   103   6e-22
Medtr1g101190.1 | cofilin/actin-depolymerizing factor-like prote...   103   6e-22

>Medtr1g101190.2 | cofilin/actin-depolymerizing factor-like protein
           | HC | chr1:45476069-45480943 | 20130731
          Length = 481

 Score =  103 bits (257), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 134/296 (45%), Gaps = 76/296 (25%)

Query: 419 GGKSNEHNGQPTETPVQKSVSPINAPSIDPTLPTD-QPVPIDLATPKHSEGKMSNAQRNN 477
           G +SNEHN +  ET VQ S+     P ID  +  + Q V +D    ++ E K +  +R  
Sbjct: 179 GAESNEHNIEQAETAVQMSILDTEVPPIDKAIAVNNQHVSLDELEERYFERKKTRKERRK 238

Query: 478 VLLS-----EGVKSNEQPT------ETPVQKSVNPIKAPSIDPTLPTDQ----PVPIDL- 521
             L        VK+N +        ET  Q+  +PI  PS DPT+  D     P+  +L 
Sbjct: 239 EYLEMKKLKSEVKTNGEEKIQNDTPETLAQRPSDPITEPSTDPTVVMDTHPATPIVAELE 298

Query: 522 --------------------------------------ATPKHSEGKMSKAQRRKKNKRA 543
                                                 ATP  +E K++K + +KK    
Sbjct: 299 ERHSERKKTRKEKKKEYMERKKLQEPSADPAVVMDTHPATPIVAEQKIAKKRHKKK---- 354

Query: 544 LKSAWSESVHHSSDQNAKTPVQRTESLKLVEA-KSVKAKSFM---ASRQHGH------KL 593
                 E+V +S    A+T VQ T+ + +  A      +S M   A R+  H      KL
Sbjct: 355 --KRKREAVQYSI---AETSVQGTKGVTVTNAPNGQHGQSSMLCWACRETDHTIQQCRKL 409

Query: 594 KYPSKDVEICFFCGEIGHSLGRCSVSRAGGGLSRFAKCLICHAQGHFSYNCTRHGH 649
           K  SKD ++CFFCGEIGHSLG+CSV  AGGG  R A+CL C+A GHFSYNC  + H
Sbjct: 410 KSLSKDEDVCFFCGEIGHSLGKCSVYIAGGG--RLARCLFCNAHGHFSYNCPGNCH 463


>Medtr1g101190.1 | cofilin/actin-depolymerizing factor-like protein
           | HC | chr1:45476177-45483680 | 20130731
          Length = 598

 Score =  103 bits (257), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 136/296 (45%), Gaps = 76/296 (25%)

Query: 419 GGKSNEHNGQPTETPVQKSVSPINAPSIDPTLPTD-QPVPIDLATPKHSEGKMSNAQRNN 477
           G +SNEHN +  ET VQ S+     P ID  +  + Q V +D    ++ E K +  +R  
Sbjct: 170 GAESNEHNIEQAETAVQMSILDTEVPPIDKAIAVNNQHVSLDELEERYFERKKTRKERRK 229

Query: 478 VLL-----SEGVKSNEQPT------ETPVQKSVNPIKAPSIDPTLPTDQ----PVPIDL- 521
             L        VK+N +        ET  Q+  +PI  PS DPT+  D     P+  +L 
Sbjct: 230 EYLEMKKLKSEVKTNGEEKIQNDTPETLAQRPSDPITEPSTDPTVVMDTHPATPIVAELE 289

Query: 522 --------------------------------------ATPKHSEGKMSKAQRRKKNKRA 543
                                                 ATP  +E K++K + +KK ++ 
Sbjct: 290 ERHSERKKTRKEKKKEYMERKKLQEPSADPAVVMDTHPATPIVAEQKIAKKRHKKKKRK- 348

Query: 544 LKSAWSESVHHSSDQNAKTPVQRTESLKLVEA-KSVKAKSFM---ASRQHGH------KL 593
                 E+V +S    A+T VQ T+ + +  A      +S M   A R+  H      KL
Sbjct: 349 -----REAVQYSI---AETSVQGTKGVTVTNAPNGQHGQSSMLCWACRETDHTIQQCRKL 400

Query: 594 KYPSKDVEICFFCGEIGHSLGRCSVSRAGGGLSRFAKCLICHAQGHFSYNCTRHGH 649
           K  SKD ++CFFCGEIGHSLG+CSV  AGGG  R A+CL C+A GHFSYNC  + H
Sbjct: 401 KSLSKDEDVCFFCGEIGHSLGKCSVYIAGGG--RLARCLFCNAHGHFSYNCPGNCH 454