Miyakogusa Predicted Gene
- Lj5g3v2013610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2013610.1 Non Characterized Hit- tr|H9XAS1|H9XAS1_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=C,50.55,1e-18,PAR1,PAR1,CUFF.56357.1
(198 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g101120.1 | PAR1 protein | HC | chr1:45449916-45451710 | 2... 335 1e-92
Medtr6g452730.1 | PAR1 protein | HC | chr6:18492916-18489882 | 2... 295 2e-80
Medtr7g066110.1 | PAR1 protein | HC | chr7:24038926-24037709 | 2... 177 7e-45
Medtr4g018880.1 | PAR1 protein | HC | chr4:5833458-5831610 | 201... 175 3e-44
Medtr4g018860.1 | PAR1 protein | HC | chr4:5828279-5829710 | 201... 172 2e-43
Medtr4g018850.1 | PAR1 protein | HC | chr4:5823569-5822408 | 201... 167 5e-42
Medtr4g018880.2 | PAR1 protein | HC | chr4:5833458-5832272 | 201... 143 9e-35
Medtr7g066090.1 | PAR1 protein | HC | chr7:24033491-24033136 | 2... 49 2e-06
>Medtr1g101120.1 | PAR1 protein | HC | chr1:45449916-45451710 |
20130731
Length = 198
Score = 335 bits (860), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 162/198 (81%), Positives = 175/198 (88%)
Query: 1 MASNFSLMSLAILALTFSLAVQGTLGGIECENLSEETCSFAVSSGGKRCVLEKRVKRTGE 60
MAS F L SL I +L SLAVQGTLGGIECENLS+ETCSFAVSS KRCVLEK VKRTGE
Sbjct: 1 MASKFILRSLLIASLAISLAVQGTLGGIECENLSKETCSFAVSSSSKRCVLEKHVKRTGE 60
Query: 61 EAYTCRTSEIEADKLKDHIETEQCVKACGLDRKSLGISSDSLLESRFTHQLCSPQCYQSC 120
EAYTC+T EIEADKLKDHIE++QC+KAC LDRKSLGISSDSLLES FT +LCSPQCY+SC
Sbjct: 61 EAYTCKTLEIEADKLKDHIESDQCIKACDLDRKSLGISSDSLLESSFTKKLCSPQCYKSC 120
Query: 121 PNVVDLYFNLAAGEGVFLPMLCEAEGGNARRGMAELKSSGIVAPGPVHFVQFLATPPEPF 180
PNVVDLYFNLAAGEGVFLP LCE +GGNARRGMAELKSSGIVAPGPVH VQF+A PP+PF
Sbjct: 121 PNVVDLYFNLAAGEGVFLPKLCEVQGGNARRGMAELKSSGIVAPGPVHSVQFVAEPPQPF 180
Query: 181 NPVEFAAEPAATPSYPPY 198
+ V+FAAEP PS PPY
Sbjct: 181 SSVQFAAEPMVAPSDPPY 198
>Medtr6g452730.1 | PAR1 protein | HC | chr6:18492916-18489882 |
20130731
Length = 192
Score = 295 bits (754), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 137/192 (71%), Positives = 160/192 (83%)
Query: 7 LMSLAILALTFSLAVQGTLGGIECENLSEETCSFAVSSGGKRCVLEKRVKRTGEEAYTCR 66
+ +L I+A F +AV+GTLGGIECENL+++TC+FAVS GKRCVLEK VKR GEE YTCR
Sbjct: 1 MRNLVIVAFVFFVAVEGTLGGIECENLNQDTCAFAVSYAGKRCVLEKHVKRNGEEKYTCR 60
Query: 67 TSEIEADKLKDHIETEQCVKACGLDRKSLGISSDSLLESRFTHQLCSPQCYQSCPNVVDL 126
TSEIEADKLKDHIE++QC+K+CGLDRKS GISSDSLLES FT LCSPQCY+SCPN+VDL
Sbjct: 61 TSEIEADKLKDHIESDQCIKSCGLDRKSFGISSDSLLESSFTKNLCSPQCYKSCPNIVDL 120
Query: 127 YFNLAAGEGVFLPMLCEAEGGNARRGMAELKSSGIVAPGPVHFVQFLATPPEPFNPVEFA 186
YFNLAAGEGVFLP LCEA+G NARR MAE+KSSGI APGP+H +F+AT PE ++
Sbjct: 121 YFNLAAGEGVFLPKLCEAQGANARREMAEIKSSGIAAPGPLHSGKFVATSPESSEAMKLT 180
Query: 187 AEPAATPSYPPY 198
EP P+ PPY
Sbjct: 181 VEPPVAPTIPPY 192
>Medtr7g066110.1 | PAR1 protein | HC | chr7:24038926-24037709 |
20130731
Length = 169
Score = 177 bits (448), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 115/166 (69%), Gaps = 4/166 (2%)
Query: 18 SLAVQGTLGGIECENLSEETCSFAVSSGGKRCVLEKRVKRTGEEAYTCRTSEIEADKLKD 77
SL + +L + CE L ++ CSF+++S GKRC+LE G Y CRTSE+ +++
Sbjct: 5 SLIIHSSLAEVVCEELQKDLCSFSIASSGKRCLLETEKAADGGIEYQCRTSEVVLERMAG 64
Query: 78 HIETEQCVKACGLDRKSLGISSDSLLESRFTHQLCSPQCYQSCPNVVDLYFNLAAGEGVF 137
+IET+QCVKACG++R +GISSD+LLE +FT +LCS CYQ+CPN+VDLYFNLAAGEGVF
Sbjct: 65 YIETDQCVKACGVERNFVGISSDALLEPQFTAKLCSSSCYQNCPNIVDLYFNLAAGEGVF 124
Query: 138 LPMLCEAEGGNARRGMAELKSSGIVAPGPVHFV---QFLATPPEPF 180
LP LCE + N R M EL SSG APGPV + + +A P P
Sbjct: 125 LPDLCEIQKTNPHRAMIELVSSG-AAPGPVSALSQDKHVAFAPSPL 169
>Medtr4g018880.1 | PAR1 protein | HC | chr4:5833458-5831610 |
20130731
Length = 181
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 109/150 (72%), Gaps = 1/150 (0%)
Query: 21 VQGTLGGIECENLSEETCSFAVSSGGKRCVLEKRVKRTGEEAYTCRTSEIEADKLKDHIE 80
+ +L + CE+L +E C+F+V+S GKRC+LE + GE Y CRTSE+ +++ ++IE
Sbjct: 18 IHASLAEMVCEDLPKEVCTFSVASSGKRCLLETQKGVNGEIEYQCRTSEVIVERISEYIE 77
Query: 81 TEQCVKACGLDRKSLGISSDSLLESRFTHQLCSPQCYQSCPNVVDLYFNLAAGEGVFLPM 140
T+QCV+ACG+DR S+GISSD+ E +FT +LCSP CY+ CPN+VDL+FN+AAGEGVFLP
Sbjct: 78 TDQCVEACGVDRSSVGISSDAFFEPQFTGKLCSPACYKKCPNIVDLFFNMAAGEGVFLPE 137
Query: 141 LCEAEGGNARRGMAELKSSGIVAPGPVHFV 170
LCE N RR M EL SSG A GP V
Sbjct: 138 LCEKHKTNPRRAMVELVSSG-AAFGPASSV 166
>Medtr4g018860.1 | PAR1 protein | HC | chr4:5828279-5829710 |
20130731
Length = 211
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 107/157 (68%), Gaps = 1/157 (0%)
Query: 10 LAILALTFSLAVQGTLGGIECENLSEETCSFAVSSGGKRCVLEKRVKRTGEEAYTCRTSE 69
L ++ L S + + + CE+L +E C+F+V+S GKRC+LE GE Y CRTSE
Sbjct: 7 LPLVLLLSSFLIHTSFAMMVCEDLPKEVCAFSVASSGKRCLLETEKNINGETEYQCRTSE 66
Query: 70 IEADKLKDHIETEQCVKACGLDRKSLGISSDSLLESRFTHQLCSPQCYQSCPNVVDLYFN 129
+ +++ +IET+QCV+ACG+DR S+GISSD+ E FT +LCSP C+ CPN+VDL+FN
Sbjct: 67 VMVERIAAYIETDQCVEACGVDRSSVGISSDAFFEPYFTSKLCSPSCFSKCPNIVDLFFN 126
Query: 130 LAAGEGVFLPMLCEAEGGNARRGMAELKSSGIVAPGP 166
LAAGEGVFLP LCE N RR EL SSG A GP
Sbjct: 127 LAAGEGVFLPELCEKHKTNPRRATIELTSSG-AALGP 162
>Medtr4g018850.1 | PAR1 protein | HC | chr4:5823569-5822408 |
20130731
Length = 215
Score = 167 bits (424), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 104/149 (69%), Gaps = 2/149 (1%)
Query: 30 CENLSEETCSFAVSSGGKRCVLEKRVKRTGEEAYTCRTSEIEADKLKDHIETEQCVKACG 89
CE+L +E C+F+V+S GKRC+LE GE Y CRTSE+ +++ +IET++CV+ACG
Sbjct: 27 CEDLPKEVCAFSVASSGKRCLLETEKNINGETEYQCRTSEVMVERIAAYIETDECVEACG 86
Query: 90 LDRKSLGISSDSLLESRFTHQLCSPQCYQSCPNVVDLYFNLAAGEGVFLPMLCEAEGGNA 149
+DR S+GISSD+ E FT +LCSP C+ CPN+VDL+FNLAAGEGVFLP LCE N
Sbjct: 87 VDRSSVGISSDAFFEPYFTSKLCSPSCFSKCPNIVDLFFNLAAGEGVFLPELCEKHKNNP 146
Query: 150 RRGMAELKSSGIVAPGPVHFV-QFLATPP 177
RR EL SSG A GP + Q +A P
Sbjct: 147 RRATIELTSSG-AALGPASSISQDIALAP 174
>Medtr4g018880.2 | PAR1 protein | HC | chr4:5833458-5832272 |
20130731
Length = 138
Score = 143 bits (361), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 89/115 (77%)
Query: 21 VQGTLGGIECENLSEETCSFAVSSGGKRCVLEKRVKRTGEEAYTCRTSEIEADKLKDHIE 80
+ +L + CE+L +E C+F+V+S GKRC+LE + GE Y CRTSE+ +++ ++IE
Sbjct: 18 IHASLAEMVCEDLPKEVCTFSVASSGKRCLLETQKGVNGEIEYQCRTSEVIVERISEYIE 77
Query: 81 TEQCVKACGLDRKSLGISSDSLLESRFTHQLCSPQCYQSCPNVVDLYFNLAAGEG 135
T+QCV+ACG+DR S+GISSD+ E +FT +LCSP CY+ CPN+VDL+FN+AAGEG
Sbjct: 78 TDQCVEACGVDRSSVGISSDAFFEPQFTGKLCSPACYKKCPNIVDLFFNMAAGEG 132
>Medtr7g066090.1 | PAR1 protein | HC | chr7:24033491-24033136 |
20130731
Length = 76
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 18 SLAVQGTLGGIECENLSEETCSFAVSSGGKRCVLEKRVKRTGEEAYTCRTSEIEADKLKD 77
SL + +L + CE L + CSF+++S KRC+LE G Y CRTSE +++
Sbjct: 15 SLIIHSSLAEVMCEELQKGLCSFSIASSRKRCLLETEKAVDGALEYQCRTSEAVVERMAG 74
Query: 78 HI 79
+I
Sbjct: 75 YI 76