Miyakogusa Predicted Gene

Lj5g3v2013430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2013430.1 Non Characterized Hit- tr|I0Z574|I0Z574_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,66.13,7e-18,seg,NULL,
gene.Ljchr5_pseudomol_20120830.path1.gene5529.1
         (158 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g101030.1 | tripeptidyl peptidase II | HC | chr1:45393537-...   129   2e-30
Medtr0025s0060.1 | tripeptidyl peptidase II | HC | scaffold0025:...   124   4e-29
Medtr0025s0060.2 | tripeptidyl peptidase II | HC | scaffold0025:...   124   4e-29
Medtr1g101015.1 | hypothetical protein | LC | chr1:45381154-4538...    80   9e-16

>Medtr1g101030.1 | tripeptidyl peptidase II | HC |
           chr1:45393537-45410250 | 20130731
          Length = 1369

 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/157 (49%), Positives = 83/157 (52%), Gaps = 15/157 (9%)

Query: 1   MHNQHTLLLRFPTLPSPSVIVLHLTEAKLSFNTRRIHTARTFFRRSNWVLPKAMXXXXXX 60
           M NQ T +    TLPSP +I LH T            T   F +  NW            
Sbjct: 2   MDNQFTFMR---TLPSPFLIHLHRT------------TNPKFIKTCNWSFISVSKPMLNL 46

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLNESTFLASLMPKTEIGVDRFLHSHPY 120
                                           KLN+STFLASLMPKTEIGVDRFLHS+P+
Sbjct: 47  CSSSFTSSQPAGDDNTKDGNNNTNGTASLRNFKLNQSTFLASLMPKTEIGVDRFLHSYPH 106

Query: 121 YDGRGALIAIFDSGVDPAATGLQVTSDGKPKILDILD 157
           YDGRG LIAIFDSGVDPAA GLQVTSDGKPKILDILD
Sbjct: 107 YDGRGVLIAIFDSGVDPAAAGLQVTSDGKPKILDILD 143


>Medtr0025s0060.1 | tripeptidyl peptidase II | HC |
           scaffold0025:23137-56611 | 20130731
          Length = 1335

 Score =  124 bits (310), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/65 (87%), Positives = 61/65 (93%)

Query: 93  KLNESTFLASLMPKTEIGVDRFLHSHPYYDGRGALIAIFDSGVDPAATGLQVTSDGKPKI 152
           KLNESTFLASLMPK EIGVDRFLHS+P YDGRGALIAIFDSGVDPA  GLQVT+DGKPKI
Sbjct: 39  KLNESTFLASLMPKKEIGVDRFLHSNPNYDGRGALIAIFDSGVDPAVDGLQVTTDGKPKI 98

Query: 153 LDILD 157
           LD++D
Sbjct: 99  LDVID 103


>Medtr0025s0060.2 | tripeptidyl peptidase II | HC |
           scaffold0025:23137-56611 | 20130731
          Length = 1324

 Score =  124 bits (310), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/65 (87%), Positives = 61/65 (93%)

Query: 93  KLNESTFLASLMPKTEIGVDRFLHSHPYYDGRGALIAIFDSGVDPAATGLQVTSDGKPKI 152
           KLNESTFLASLMPK EIGVDRFLHS+P YDGRGALIAIFDSGVDPA  GLQVT+DGKPKI
Sbjct: 39  KLNESTFLASLMPKKEIGVDRFLHSNPNYDGRGALIAIFDSGVDPAVDGLQVTTDGKPKI 98

Query: 153 LDILD 157
           LD++D
Sbjct: 99  LDVID 103


>Medtr1g101015.1 | hypothetical protein | LC |
           chr1:45381154-45382057 | 20130731
          Length = 121

 Score = 79.7 bits (195), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 59/131 (45%), Gaps = 15/131 (11%)

Query: 1   MHNQHTLLLRFPTLPSPSVIVLHLTEAKLSFNTRRIHTARTFFRRSNWVLPKAMXXXXXX 60
           M NQ T +    TLPSP +I LH T            T   F RR NW            
Sbjct: 1   MDNQFTFMR---TLPSPFLIHLHRT------------TNPNFIRRFNWSFVSISKPMFNL 45

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLNESTFLASLMPKTEIGVDRFLHSHPY 120
                                           KLN+STFLASLMPKTEIGVDRFLHS+P+
Sbjct: 46  YSSSFTSSQSAAEEDHNDGNNDTNGTSSFRNFKLNQSTFLASLMPKTEIGVDRFLHSYPH 105

Query: 121 YDGRGALIAIF 131
           YDGRG LIAIF
Sbjct: 106 YDGRGVLIAIF 116