Miyakogusa Predicted Gene

Lj5g3v1999150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1999150.1 Non Characterized Hit- tr|I1H1L1|I1H1L1_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,43.87,9e-19,seg,NULL; coiled-coil,NULL,CUFF.56328.1
         (252 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g100880.1 | ATP-binding protein, putative | HC | chr1:4529...   182   3e-46

>Medtr1g100880.1 | ATP-binding protein, putative | HC |
           chr1:45292482-45295299 | 20130731
          Length = 456

 Score =  182 bits (462), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/240 (47%), Positives = 133/240 (55%), Gaps = 4/240 (1%)

Query: 7   ADHVLNLDKVPYYQSTSEGKEDGSVGKEVEDLKQRVERNES---VSKALESLISMKDCLS 63
           +DH L+ DKVPY+++    K+D   G EVED+K+RVE+ E    + +A ES  S+KD LS
Sbjct: 26  SDHSLHSDKVPYFETVLREKQDVLEGNEVEDIKERVEKEEKNGLMLRAFESFTSIKDSLS 85

Query: 64  RVIEGLEGEKDENYVTLEGDGXXXXXXXXXXXXXXXXXXTSRLAVEVETRVSKYXXXXXX 123
           RV E LEG+KDE +V                         SRLA EVET+V  Y      
Sbjct: 86  RVKESLEGKKDETFVREIVCVESELRDESMVLLLEEASFISRLATEVETKVENYKELRKK 145

Query: 124 XXXXXXXXXXXXXXXNRDINNLLRVSLLEKEALEKRIKGHDHKRMPLLQFAEFGLQKVXX 183
                          NRDINNLLRV+LLEKEALEK+IKGHDHKRMPLLQFAEFGLQKV  
Sbjct: 146 EKRELENSLISLTEENRDINNLLRVALLEKEALEKKIKGHDHKRMPLLQFAEFGLQKVGF 205

Query: 184 XXXXXXXXXEQPTEGXXXXXXXXXXX-XXXXXXXXXTVERIMKNLRLEITQLRRALEESR 242
                    EQ  +                      TVERIMKNLRLEITQLR++LEESR
Sbjct: 206 RFMMGGGNNEQSMDSTSEANNSDSSECEVEVVSLASTVERIMKNLRLEITQLRKSLEESR 265