Miyakogusa Predicted Gene

Lj5g3v1988600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1988600.1 Non Characterized Hit- tr|C6TB33|C6TB33_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,39.26,4e-19,DUF4228,Protein of unknown function DUF4228;
seg,NULL,CUFF.56417.1
         (212 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g099630.1 | DUF4228 domain protein | HC | chr1:45000444-44...   278   3e-75
Medtr6g052290.1 | DUF4228 domain protein | HC | chr6:18245121-18...   191   3e-49
Medtr8g017100.1 | DUF4228 domain protein | HC | chr8:5751114-575...   124   8e-29

>Medtr1g099630.1 | DUF4228 domain protein | HC |
           chr1:45000444-44999628 | 20130731
          Length = 203

 Score =  278 bits (711), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 144/191 (75%), Positives = 156/191 (81%), Gaps = 12/191 (6%)

Query: 1   MGNCFLGAMADPDAAAIKVTTSNGGIMEFNAPVTVSSITSEFPGHAMFRSHDLFWKPLSQ 60
           MGNCF+GAMAD D   IKV TSNGGIMEF+AP+TVS IT EFPGHA+FRSHDLFWKPLSQ
Sbjct: 1   MGNCFVGAMADSDTT-IKVITSNGGIMEFSAPITVSFITKEFPGHAIFRSHDLFWKPLSQ 59

Query: 61  FDELEAGKSYYLLPLNNNNIEITS-SD---VVRQGHVRSHSVPTTSHPAPYRMSLDYQHH 116
           FDELEAG+SYYLLP+NNN IE T  SD   VVRQGHVRSHSVPTTS+PAPYRMSLDYQHH
Sbjct: 60  FDELEAGQSYYLLPINNNKIEATCGSDYEHVVRQGHVRSHSVPTTSYPAPYRMSLDYQHH 119

Query: 117 QQGMGLLKNSVAXXXXXXXXXXXXRFWKVKLVISPEQLVDILAQEARTKELMESVRIVAK 176
            QGM  LK S              RFWKVKLVISPEQL++ILAQEARTKEL+ESVRIVAK
Sbjct: 120 -QGMRFLKKSSI-----ESLSSSSRFWKVKLVISPEQLMEILAQEARTKELIESVRIVAK 173

Query: 177 CG-IGSASSDM 186
           CG I SA+ D+
Sbjct: 174 CGDISSAAEDI 184


>Medtr6g052290.1 | DUF4228 domain protein | HC |
           chr6:18245121-18246057 | 20130731
          Length = 248

 Score =  191 bits (486), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 108/214 (50%), Positives = 132/214 (61%), Gaps = 32/214 (14%)

Query: 1   MGNCFLGAMADPDAAAIKVTTSNGGIMEFNAPVTVSSITSEFPGHAMFRSHDLFWKPLSQ 60
           MGNC LGA +DPD   IKV T +G IMEF  P+TV+ IT+EF GHA+F ++D   KPL Q
Sbjct: 1   MGNCLLGANSDPDTL-IKVITFDGNIMEFYPPITVNFITNEFQGHAIFPTNDQSSKPLCQ 59

Query: 61  FDELEAGKSYYLLPLN----NNNIEITSSDVVRQG----------HVRSHSVPTTSHPAP 106
           FDEL AG+SYYLLP+     NN I+  S+    +           HVRS SVPTT  PAP
Sbjct: 60  FDELVAGQSYYLLPMTVLSPNNKIDYPSTCATAETGGGGQIIRQGHVRSQSVPTTPLPAP 119

Query: 107 YRMSLDYQHHQQGMGLLK----------------NSVAXXXXXXXXXXXXRFWKVKLVIS 150
           YRMSLDYQ++ QG+GLLK                N                 WKVKL I+
Sbjct: 120 YRMSLDYQYY-QGVGLLKRTSTESFSCRTNRSSVNKSTISSSRRSSRKSTGIWKVKLCIT 178

Query: 151 PEQLVDILAQEARTKELMESVRIVAKCGIGSASS 184
           PE+L++IL+QE  TKEL+ESVRIVAKCG+ +ASS
Sbjct: 179 PEKLLEILSQEVSTKELIESVRIVAKCGVTAASS 212


>Medtr8g017100.1 | DUF4228 domain protein | HC |
           chr8:5751114-5750181 | 20130731
          Length = 202

 Score =  124 bits (310), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 107/212 (50%), Gaps = 20/212 (9%)

Query: 1   MGNCFLGAM--ADPDAAAIKVTTSNGGIMEFNAPVTVSSITSEFPGHAMFRSH-DLFWKP 57
           MGNC        D +   +++ TSNGGIME  +P+TV  IT+EFP H +F+++ +   KP
Sbjct: 1   MGNCVFKGFHHGDFEETMVRIVTSNGGIMELYSPITVECITNEFPHHGIFKNNRNTLSKP 60

Query: 58  LSQFDELEAGKSYYLLPLNNNNIEITSSDVVRQGHVRSHSVPTTSHPAPYRMSLDYQHHQ 117
           LS+ +EL+AG+ YYLLPL N         +V+Q         T     PYRMS       
Sbjct: 61  LSKNEELQAGEIYYLLPLKN---------IVKQFG------ETFETLTPYRMST--CDKN 103

Query: 118 QGMGLLKNSVAXXXXXXXXXXXXRFWKVKLVISPEQLVDILAQEARTKELMESVRIVAKC 177
                  N+                WKVKLVISPE+L +IL+QE+RT+ L+ESVR VAKC
Sbjct: 104 SNNNNNNNNSWSEHEVFPRYNSSGVWKVKLVISPEKLSEILSQESRTEALIESVRTVAKC 163

Query: 178 GIGSASSDMVXXXXXXXXXXXXXXXXKIDAFD 209
           G G  SS  V                 ID F+
Sbjct: 164 GNGVPSSSSVANSDQWSVSSSFKGSTLIDKFN 195