Miyakogusa Predicted Gene

Lj5g3v1950880.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1950880.1 Non Characterized Hit- tr|B8LM63|B8LM63_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,51.55,3e-18,FAMILY NOT NAMED,NULL; Myb_DNA-bind_4,NULL; seg,NULL;
coiled-coil,NULL,CUFF.56227.1
         (449 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g098920.1 | transcription factor | HC | chr1:44579113-4457...   546   e-155
Medtr6g035315.1 | transcription factor | HC | chr6:12637326-1263...   527   e-150
Medtr2g098080.1 | transcription factor | HC | chr2:41910799-4190...   221   1e-57
Medtr7g103390.1 | Myb/SANT-like DNA-binding domain protein | HC ...   200   2e-51
Medtr1g061640.1 | Myb/SANT-like DNA-binding domain protein | HC ...   197   1e-50

>Medtr1g098920.1 | transcription factor | HC |
           chr1:44579113-44577727 | 20130731
          Length = 450

 Score =  546 bits (1408), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 286/434 (65%), Positives = 314/434 (72%), Gaps = 12/434 (2%)

Query: 21  DLPGSIQVHHHQGQHPHAMQQHQTHPCQGSTVH--VHDGFPRTMGTLQSSCDPTLSMSDF 78
           DLPGSIQVHH Q  HPH + QHQ +P QG ++H  V DGFP TMG LQ+ CD ++SM+D+
Sbjct: 24  DLPGSIQVHH-QAHHPHTIHQHQANPHQGLSLHSSVQDGFPLTMGPLQN-CDQSMSMTDY 81

Query: 79  GKGERGKNSTSEEDEPSFNEDGVDGHHEGVRGKKGS--PWQRVKWTDKMVRLLITAVSYM 136
           GKGERGK  TSEEDEPSF EDG DG HEG RGKKGS  PWQRVKWTD MVRL+ITAVSY+
Sbjct: 82  GKGERGKICTSEEDEPSFMEDGFDGQHEGGRGKKGSSSPWQRVKWTDNMVRLMITAVSYI 141

Query: 137 GEDITSEXXXXXXRRKFTVLQKKGKWKSVSKVMAERGYRVSPQQCEDKFNDLNKRYKKLN 196
           GED TS+      RRKF VLQKKGKW+ VSKVMAERG  VSPQQCEDKFNDLNKRYKKLN
Sbjct: 142 GEDRTSDGVGGSGRRKFAVLQKKGKWRCVSKVMAERGCHVSPQQCEDKFNDLNKRYKKLN 201

Query: 197 DMLGRGTSCQVVENPALLDVIEFLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHD 256
           DMLGRGTSC+VVENPALLD I +LSEKEKD+VRKILSSK LFYEEMCSYHN NRLHLPHD
Sbjct: 202 DMLGRGTSCEVVENPALLDGIYYLSEKEKDEVRKILSSKQLFYEEMCSYHNCNRLHLPHD 261

Query: 257 PALQRSLQIALXXXXXXXXXXXXXXXXXGHXXXXXXXXXXXXXXFKENCSSHGDSRGMYG 316
           PALQ S+Q+AL                  H              FK+NC+S G+ R    
Sbjct: 262 PALQSSMQLALRNRDDHDNDDIRRSQLDDHDEDEQDAETDEHDAFKDNCASRGEGR---- 317

Query: 317 PLGGSMKKLKQVQVQEDANTFGNSVNGQGY-NKSSHPHGQVVHSDVNQVLPEGMRAAWLQ 375
            L GSMKKLKQ Q Q  AN FGNS N Q Y NK S+P GQ+  SD NQV+PE MRAAWLQ
Sbjct: 318 -LNGSMKKLKQNQGQNHANAFGNSFNCQDYFNKGSYPRGQMGQSDGNQVIPENMRAAWLQ 376

Query: 376 KQWVESRSXXXXXXXXXXXXXXXXXXXXRLKWQRFSKKKDRELEKLSLENERMKLENERI 435
           KQWV+SR                     R KWQRFSK+KDRELEKLSLENERMKLENER+
Sbjct: 377 KQWVDSRQVQLEEQKLQIQAEKLELEKQRFKWQRFSKQKDRELEKLSLENERMKLENERM 436

Query: 436 ALELKRKEMGAGLN 449
           ALELK+KEM  G N
Sbjct: 437 ALELKQKEMSLGFN 450


>Medtr6g035315.1 | transcription factor | HC |
           chr6:12637326-12639010 | 20130731
          Length = 526

 Score =  527 bits (1358), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 284/451 (62%), Positives = 322/451 (71%), Gaps = 8/451 (1%)

Query: 1   MEGNLSXXXXXXXXXXXXXX-DLPGSIQVHHHQGQHPHAMQQHQTHPCQGSTVH--VHDG 57
           MEGNLS               DLPGS++VH  QGQHPH M QHQ HPCQG  VH  +++G
Sbjct: 1   MEGNLSQGGIVQGGGGSFGGFDLPGSMRVHR-QGQHPHTMNQHQAHPCQGPAVHSSINEG 59

Query: 58  FPRTMGTLQSSCDPTLSMSDFGKGERGKNSTSEEDEPSFNEDGVDGHHEGVRGKKGSPWQ 117
           FP TMGTL++ CD T+SM++F +G+R K+S SEED     E G   H EG RGKKGSPWQ
Sbjct: 60  FPLTMGTLKN-CDQTMSMNEFSQGDRNKHSGSEED--EPEEGGDGHHQEGSRGKKGSPWQ 116

Query: 118 RVKWTDKMVRLLITAVSYMGEDITSEXXXXXXRRKFTVLQKKGKWKSVSKVMAERGYRVS 177
           RVKWTDKMVRLLITAVSY+  +  S       RRKF VLQKKGKWKS+SKVMAERGYRVS
Sbjct: 117 RVKWTDKMVRLLITAVSYI-GEDGSSEGGSGGRRKFAVLQKKGKWKSISKVMAERGYRVS 175

Query: 178 PQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVIEFLSEKEKDDVRKILSSKHL 237
           PQQCEDKFNDLNKRYK+LNDMLGRGTSCQVVENPALLDVIE+L+EKEKDDVRKIL+SKHL
Sbjct: 176 PQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPALLDVIEYLNEKEKDDVRKILNSKHL 235

Query: 238 FYEEMCSYHNGNRLHLPHDPALQRSLQIALXXXXXXXXXXXXXXXXXGHXXXXXXXXXXX 297
           FYEEMCSYHN NRLHLPHDPALQRSLQIAL                  H           
Sbjct: 236 FYEEMCSYHNCNRLHLPHDPALQRSLQIALRNRDDHDNDDVRRSYHDDHDEDDHDMETDD 295

Query: 298 XXXFKENCSSHGDSRGMYGPLGGSMKKLKQVQVQEDANTFGNSVNGQGYNKSSHPHGQVV 357
              F+EN +SHGDSR ++G LGG+ K+L+Q Q  EDA TFGNS N Q Y+KS +PHGQ+V
Sbjct: 296 HDEFEENYASHGDSRVIFGGLGGTPKRLRQGQGHEDATTFGNSFNCQDYHKSPYPHGQMV 355

Query: 358 HSDVNQVLPEGMRAAWLQKQWVESRSXXXXXXXXXXXXXXXXXXXXRLKWQRFSKKKDRE 417
             D N  LPE M+AAWLQKQW+ESRS                    + KW+RFSKKKDRE
Sbjct: 356 QPDGNHALPENMKAAWLQKQWIESRSVQLEEQKLQIQVEMMELEKQKFKWERFSKKKDRE 415

Query: 418 LEKLSLENERMKLENERIALELKRKEMGAGL 448
           LEK  LEN+RMK+ENERIALELKRKE+G  +
Sbjct: 416 LEKFKLENDRMKIENERIALELKRKEIGGTI 446


>Medtr2g098080.1 | transcription factor | HC |
           chr2:41910799-41908705 | 20130731
          Length = 445

 Score =  221 bits (562), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 115/191 (60%), Positives = 138/191 (72%), Gaps = 9/191 (4%)

Query: 77  DFGKGE-------RGKNSTSEEDEPSFNEDG-VDGHHEGVRGKKGSPWQRVKWTDKMVRL 128
           +FGKG+          N  SE+DE  + EDG  +   +G +GKKGSPWQR+KWTD +V L
Sbjct: 63  NFGKGKGIASSNHDNSNDMSEDDEHGYGEDGNCENFFDGGKGKKGSPWQRMKWTDNVVGL 122

Query: 129 LITAVSYMGEDITSEXXXXXXRRKFTVLQKKGKWKSVSKVMAERGYRVSPQQCEDKFNDL 188
           LI  VS +GED T        +RK  V+QKKGKWK+VSK+M  +G  VSPQQCEDKFNDL
Sbjct: 123 LIAVVSCVGEDGTI-SGVDGVKRKSGVVQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDL 181

Query: 189 NKRYKKLNDMLGRGTSCQVVENPALLDVIEFLSEKEKDDVRKILSSKHLFYEEMCSYHNG 248
           NKRYK+LN++LGRGT CQVVENPAL+D +  LS K KDDVRKILSSKHLFY+EMC+YHNG
Sbjct: 182 NKRYKRLNEILGRGTCCQVVENPALMDSMVNLSAKAKDDVRKILSSKHLFYKEMCAYHNG 241

Query: 249 NRLHLPHDPAL 259
            R+   HD  L
Sbjct: 242 QRIPNSHDLDL 252



 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 51/90 (56%)

Query: 357 VHSDVNQVLPEGMRAAWLQKQWVESRSXXXXXXXXXXXXXXXXXXXXRLKWQRFSKKKDR 416
           + S++ +V  + +++ W +++W++ +                     + KW R+  KKDR
Sbjct: 325 LESEMARVFQDPVKSPWEKREWIKQQLLQLQEQNVDFQAKAFELQKQQFKWLRYRSKKDR 384

Query: 417 ELEKLSLENERMKLENERIALELKRKEMGA 446
           ELEKL++EN+RMK ENE   L+LK++E  A
Sbjct: 385 ELEKLAMENKRMKFENEHRILKLKQREQEA 414


>Medtr7g103390.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr7:41824255-41826144 | 20130731
          Length = 455

 Score =  200 bits (509), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 104/214 (48%), Positives = 138/214 (64%), Gaps = 16/214 (7%)

Query: 34  QHPHAMQQHQTHPCQGSTVHVHDGFPRTMGTLQSSCDPTLSMSDFGKGERGKNSTSEEDE 93
           Q+PH +  HQ          +  G+P              S ++  K ++   + S+EDE
Sbjct: 32  QNPHTLHHHQMVSYDQPHQSIKQGYPYP------------SKTNNNKPQQININLSDEDE 79

Query: 94  PSFNEDGVDGHHEGVRGKKGSPWQRVKWTDKMVRLLITAVSYMGEDITSEXXXXXXRRKF 153
           P F   G D    G   +KGSPW R+KWTD MVRLLI AV Y+G++  +       ++  
Sbjct: 80  PCF---GADETSVGDPKRKGSPWHRMKWTDTMVRLLIMAVYYIGDEAGTSELSADKKKAN 136

Query: 154 TVLQKKGKWKSVSKVMAERGYRVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPAL 213
            +LQKKGKWKSVSK M E+GY VSPQQCEDKFNDLNKRYK++ND+LG+GT+C+VVEN  L
Sbjct: 137 GLLQKKGKWKSVSKGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQTL 196

Query: 214 LDVIEFLSEKEKDDVRKILSSKHLFYEEMCSYHN 247
           LD ++ LS K K++ RK+L+SKHLF+ EMC+YHN
Sbjct: 197 LDTMD-LSAKLKEEARKLLNSKHLFFREMCAYHN 229



 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 50/89 (56%)

Query: 355 QVVHSDVNQVLPEGMRAAWLQKQWVESRSXXXXXXXXXXXXXXXXXXXXRLKWQRFSKKK 414
           Q + S+V  VL +G+++ W +KQW++ +                     RLKW +FS  K
Sbjct: 350 QQLSSEVMSVLQDGVKSCWEKKQWMKKKVVQLGEEQVNYHVEAFEIEKQRLKWVKFSSNK 409

Query: 415 DRELEKLSLENERMKLENERIALELKRKE 443
           +RE+E+  LENER  LE +R+ L L++KE
Sbjct: 410 EREMERQKLENERKSLEIDRMVLLLRQKE 438


>Medtr1g061640.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr1:26921093-26919086 | 20130731
          Length = 496

 Score =  197 bits (502), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 96/159 (60%), Positives = 123/159 (77%), Gaps = 4/159 (2%)

Query: 89  SEEDEPSFNEDGVDGHHEGVRGKKGSPWQRVKWTDKMVRLLITAVSYMGEDITSEXXXXX 148
           S+EDEP+F  +   G   G   +K SPWQR+KWTD MVRLLI AV Y+G++  SE     
Sbjct: 95  SDEDEPNFPAEESSG---GDPKRKISPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDPN 151

Query: 149 XRRKFTVLQKKGKWKSVSKVMAERGYRVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVV 208
            ++   +LQKKGKWKSVS+ M E+G+ VSPQQCEDKFNDLNKRYK++ND+LG+GT+C+VV
Sbjct: 152 KKKSSGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVV 211

Query: 209 ENPALLDVIEFLSEKEKDDVRKILSSKHLFYEEMCSYHN 247
           EN  LLD ++ LS K KD+VRK+L+SKHLF+ EMC+YHN
Sbjct: 212 ENQGLLDSMD-LSPKMKDEVRKLLNSKHLFFREMCAYHN 249



 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 53/88 (60%)

Query: 357 VHSDVNQVLPEGMRAAWLQKQWVESRSXXXXXXXXXXXXXXXXXXXXRLKWQRFSKKKDR 416
           ++++++ V  +G ++ W +KQW+ +R                     RLKW R+S KK+R
Sbjct: 393 MNNEISGVFQDGGKSTWEKKQWIRNRIMQLEEQKIGYESQAFQLEKQRLKWARYSSKKER 452

Query: 417 ELEKLSLENERMKLENERIALELKRKEM 444
           E+E+  LENER +LENER+ L +++KE+
Sbjct: 453 EMERAKLENERRRLENERMVLLIRKKEL 480