Miyakogusa Predicted Gene

Lj5g3v1949720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1949720.1 Non Characterized Hit- tr|F6GY40|F6GY40_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,46.09,2e-18,seg,NULL; HSP20,Alpha crystallin/Hsp20 domain;
HEAT-SHOCK PROTEIN 17,NULL; SMALL HEAT-SHOCK PROTEIN ,gene.g62595.t1.1
         (210 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g098690.1 | hsp20/alpha crystallin family protein | HC | c...   283   7e-77
Medtr1246s0010.1 | hsp20/alpha crystallin family protein | HC | ...   123   1e-28

>Medtr1g098690.1 | hsp20/alpha crystallin family protein | HC |
           chr1:44452807-44453935 | 20130731
          Length = 214

 Score =  283 bits (724), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 151/214 (70%), Positives = 170/214 (79%), Gaps = 6/214 (2%)

Query: 1   MEVELGLKXXXXXXXXXXXXXFQFAKDRAGPLFLSKETDAMFTLTAHLKGYKKDNIDISI 60
           MEVELGLK             FQFAKDRAGP+FLSKETDA FTLTAHLKGYKK+NIDI+I
Sbjct: 1   MEVELGLKITRTKDDTTSISDFQFAKDRAGPIFLSKETDATFTLTAHLKGYKKENIDINI 60

Query: 61  SVDGTEISVSGEKEVQEMQMIPFKKELKIKGFRKKFKIPDGVVLDRIKAKYDEEDAALTI 120
           + DGT+ISVSGEKEVQEMQMIPFKKELKIKGFRKKFKIP+GVVLD+IKAKY EE+  L I
Sbjct: 61  NKDGTKISVSGEKEVQEMQMIPFKKELKIKGFRKKFKIPNGVVLDKIKAKYYEEEEVLRI 120

Query: 121 VMPKMEMAKGI-SGDGLXXXXXXXXXNKSVIQEAEQSAPEEVP---DKTEEETAPVKKRG 176
           VMPK E+ KG+ SG G+         + S+I+E EQS+ EEV     K+EEE APVKKR 
Sbjct: 121 VMPKTEIVKGVLSGMGIEEVKEEEGAS-SIIEEPEQSSREEVKVTDHKSEEENAPVKKRR 179

Query: 177 P-KPWKPCPPLYLGGSTLLVSLIFLVIHYIRVRK 209
           P KPW+PCPPL LGGSTLLVS+IFLV+HYIRVRK
Sbjct: 180 PRKPWQPCPPLILGGSTLLVSIIFLVMHYIRVRK 213


>Medtr1246s0010.1 | hsp20/alpha crystallin family protein | HC |
           scaffold1246:1811-770 | 20130731
          Length = 153

 Score =  123 bits (308), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/136 (51%), Positives = 89/136 (65%), Gaps = 6/136 (4%)

Query: 1   MEVELGLKXXXXXXXXXXXXXFQFAKDRAGPLFLSKETDAMFTLTAHLKGYKKDNIDISI 60
           ME+ELGLK             ++  KD  GP+F S+ET+ MF LTAHLKGYK+ +IDI I
Sbjct: 1   MELELGLKITKTKDDIDSISEYKLMKD-TGPIFQSRETNTMFILTAHLKGYKRISIDIKI 59

Query: 61  SVDGTEISVSGEKEVQEMQMIPF---KKELKIKGFRKKFKIPDGVVLDRIKAKYDEEDAA 117
           S DG++IS+SGEK +QEM M+ +   +K + IKGF K FKIP GV LD+IK  Y+EE+  
Sbjct: 60  SKDGSKISISGEKPIQEMIMMGWVMQRKVVDIKGFNKVFKIPYGVNLDKIKGNYNEEEWI 119

Query: 118 LTIVMPKMEMAKGISG 133
           L I MP     KGI G
Sbjct: 120 LNIYMP--NFVKGIFG 133