Miyakogusa Predicted Gene

Lj5g3v1949650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1949650.1 Non Characterized Hit- tr|E1ZC18|E1ZC18_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,27.49,0.0000000000003,seg,NULL; PAP2_C,Sphingomyelin
synthase-like domain; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL;
SPH,CUFF.56243.1
         (428 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g098650.1 | plant inositol phosphorylceramide synthase | H...   639   0.0  

>Medtr1g098650.1 | plant inositol phosphorylceramide synthase | HC |
           chr1:44425628-44429502 | 20130731
          Length = 424

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/419 (74%), Positives = 340/419 (81%)

Query: 10  NAGLGVAAMSYVAVDYLRHLSPTWHSRXXXXXXXXXXXXXXXRVPSYRHWSAEFRAAIPX 69
           NAGLGVAAMSY+AVDYLRHLSPTWHSR               RVPSYRHWSAEFR+AIP 
Sbjct: 6   NAGLGVAAMSYIAVDYLRHLSPTWHSRLQPALWTLLALAAVVRVPSYRHWSAEFRSAIPF 65

Query: 70  XXXXXXXXXXXXXEAISVRSVTAVLGLDWHRNTPPLPDTGQWFLLALNEKLPSVIVEILR 129
                        EA+SVRSVTAVLGLDWHRNT PLPDTGQWFLLALNEKLP+ IVEILR
Sbjct: 66  IASMLFMLACLLYEALSVRSVTAVLGLDWHRNTAPLPDTGQWFLLALNEKLPAPIVEILR 125

Query: 130 ARIIGXXXXXXXXXXXAFSVLFDSVRAPGLGLGARYMFTMAIGRLLRAISFPSTILPSAR 189
           ARIIG           AFSVLF SV+APGLGLGARYMFTMAIGRLLRAI+F STILPSAR
Sbjct: 126 ARIIGLHHFLMLFMMLAFSVLFGSVKAPGLGLGARYMFTMAIGRLLRAITFASTILPSAR 185

Query: 190 PWCASSRFRVPSYPHRWAQKYYVPYASDHNAINQLIKLDKAYVDIGSPAADYQPEWGSAS 249
           PWCASSRFRVP YPHRWAQKYY PYASDHNAI+ L+++D+AY DIG    DYQPEWGS S
Sbjct: 186 PWCASSRFRVPGYPHRWAQKYYAPYASDHNAISHLLRVDQAYADIGESIGDYQPEWGSMS 245

Query: 250 FLIDFLRPTASEGPSWFSLLKKAGGGCNDLLYSGHMLVAVLTAMAWTEAYGGFSSALIWL 309
           FL DFLRPTASEGPSWF LLKKAGGGCNDLLYSGHMLVAVLTAMAWTEAYGGFSSAL+WL
Sbjct: 246 FLSDFLRPTASEGPSWFGLLKKAGGGCNDLLYSGHMLVAVLTAMAWTEAYGGFSSALVWL 305

Query: 310 FVAHSAQREVRERHHYSVDCIVAIYVGILLWKMTGFIWSQKDASRDRNLSKLEKIQSRLV 369
            V HSAQREVRERHHYSVDCIVAIYVGILLWKMTGFIWS++  S +R+L K EKI+SRL+
Sbjct: 306 LVLHSAQREVRERHHYSVDCIVAIYVGILLWKMTGFIWSREVRSGNRSLIKFEKIKSRLI 365

Query: 370 QAAKDSDIEEVRXXXXXXXXXXXXXXXQTSIKYSKLFSSATIVFALTIVILAFTLTSDG 428
           QA+KDSDI++VR               QT++KY++LF  ATIVFALTIV+LAFTLT+DG
Sbjct: 366 QASKDSDIDKVRELLKEIDISSEESRSQTTLKYARLFRCATIVFALTIVVLAFTLTTDG 424