Miyakogusa Predicted Gene

Lj5g3v1938430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1938430.1 Non Characterized Hit- tr|I1LDE9|I1LDE9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57635
PE,93.57,0,RIBOSOMAL_L3,Ribosomal protein L3, conserved site;
Translation proteins,Translation elongation/initi,CUFF.56784.1
         (389 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g098540.1 | 60S ribosomal protein L3B | HC | chr1:44369848...   705   0.0  
Medtr1g098540.3 | 60S ribosomal protein L3B | HC | chr1:44369862...   705   0.0  
Medtr1g098540.2 | 60S ribosomal protein L3B | HC | chr1:44369877...   705   0.0  
Medtr4g094398.1 | 60S ribosomal protein L3B | HC | chr4:37890257...   679   0.0  

>Medtr1g098540.1 | 60S ribosomal protein L3B | HC |
           chr1:44369848-44366402 | 20130731
          Length = 389

 Score =  705 bits (1820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/389 (89%), Positives = 366/389 (94%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVK+FPKDDP+K PKLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCEPVTIIETPPMV+VGVVGYVKTPRG+RTLNTVW QHLSEE+KRRFY 
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          Q+ES+EGKKN+Q QLEK+KKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           IMEIQVNGGT+AQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYRLGKAGDESHSAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIY+LGK G+E+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVGEETHDAQT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKDDFLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYGIVK+DFLMIKGGCVGPKKRVITLRQSLLKQTSR+ALE+IKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKEDFLMIKGGCVGPKKRVITLRQSLLKQTSRLALEDIKL 360

Query: 361 KFIDTSSKFGHGRFQSTQEKQKFYGRLKA 389
           KFIDTSSKFGHGRFQ+T EKQKFYGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTSEKQKFYGRLKA 389


>Medtr1g098540.3 | 60S ribosomal protein L3B | HC |
           chr1:44369862-44366386 | 20130731
          Length = 389

 Score =  705 bits (1820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/389 (89%), Positives = 366/389 (94%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVK+FPKDDP+K PKLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCEPVTIIETPPMV+VGVVGYVKTPRG+RTLNTVW QHLSEE+KRRFY 
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          Q+ES+EGKKN+Q QLEK+KKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           IMEIQVNGGT+AQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYRLGKAGDESHSAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIY+LGK G+E+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVGEETHDAQT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKDDFLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYGIVK+DFLMIKGGCVGPKKRVITLRQSLLKQTSR+ALE+IKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKEDFLMIKGGCVGPKKRVITLRQSLLKQTSRLALEDIKL 360

Query: 361 KFIDTSSKFGHGRFQSTQEKQKFYGRLKA 389
           KFIDTSSKFGHGRFQ+T EKQKFYGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTSEKQKFYGRLKA 389


>Medtr1g098540.2 | 60S ribosomal protein L3B | HC |
           chr1:44369877-44366402 | 20130731
          Length = 389

 Score =  705 bits (1820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/389 (89%), Positives = 366/389 (94%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVK+FPKDDP+K PKLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCEPVTIIETPPMV+VGVVGYVKTPRG+RTLNTVW QHLSEE+KRRFY 
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          Q+ES+EGKKN+Q QLEK+KKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           IMEIQVNGGT+AQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYRLGKAGDESHSAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIY+LGK G+E+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVGEETHDAQT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKDDFLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYGIVK+DFLMIKGGCVGPKKRVITLRQSLLKQTSR+ALE+IKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKEDFLMIKGGCVGPKKRVITLRQSLLKQTSRLALEDIKL 360

Query: 361 KFIDTSSKFGHGRFQSTQEKQKFYGRLKA 389
           KFIDTSSKFGHGRFQ+T EKQKFYGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTSEKQKFYGRLKA 389


>Medtr4g094398.1 | 60S ribosomal protein L3B | HC |
           chr4:37890257-37894814 | 20130731
          Length = 389

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/389 (84%), Positives = 363/389 (93%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVK+FPKDDP+K  +LTAF+GYK+GMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPCRLTAFVGYKSGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCE VTIIETPP+V+VGVVGYVKTPRG+RTLNTVWAQHLSE+VKRRFY 
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPIVVVGVVGYVKTPRGLRTLNTVWAQHLSEDVKRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          ++E++EGKK++Q QLEK+KKYATV+RVLAHTQ+RK+KGLKQKKAH
Sbjct: 121 NWAKSKKKAFTKYTKKYETDEGKKDIQTQLEKLKKYATVIRVLAHTQVRKLKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQVNGGTV QKVD+AY+FFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVNQKVDYAYNFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYRLGKAGDESHSAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIY++GK   ESH+AIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKQDQESHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKDDFLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYG+V  D+LMIKGGCVGPKKRV+TLRQSLLKQTSR+ALE+IKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVNHDYLMIKGGCVGPKKRVVTLRQSLLKQTSRLALEDIKL 360

Query: 361 KFIDTSSKFGHGRFQSTQEKQKFYGRLKA 389
           KFIDTSSKFGHGRFQ+TQEKQKFYGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 389