Miyakogusa Predicted Gene
- Lj5g3v1938420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1938420.1 CUFF.56250.1
(241 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g098530.2 | polypyrimidine tract-binding-like protein | HC... 416 e-117
Medtr1g098530.1 | polypyrimidine tract-binding-like protein | HC... 416 e-117
Medtr6g043520.1 | polypyrimidine tract-binding-like protein | HC... 394 e-110
Medtr6g043520.2 | polypyrimidine tract-binding-like protein | HC... 394 e-110
Medtr6g043520.3 | polypyrimidine tract-binding-like protein | HC... 394 e-110
Medtr6g037550.1 | polypyrimidine tract-binding-like protein | HC... 350 8e-97
Medtr7g011070.1 | polypyrimidine tract-binding-like protein | HC... 152 2e-37
Medtr6g012590.1 | polypyrimidine tract-binding-like protein | HC... 147 7e-36
Medtr3g090960.1 | polypyrimidine tract-binding-like protein | HC... 145 2e-35
Medtr3g090960.2 | polypyrimidine tract-binding-like protein | HC... 145 2e-35
Medtr1g028440.1 | polypyrimidine tract-binding-like protein | HC... 135 4e-32
Medtr3g090960.3 | polypyrimidine tract-binding-like protein | HC... 108 6e-24
Medtr3g090960.4 | polypyrimidine tract-binding-like protein | HC... 108 6e-24
Medtr3g090960.5 | polypyrimidine tract-binding-like protein | HC... 108 6e-24
>Medtr1g098530.2 | polypyrimidine tract-binding-like protein | HC |
chr1:44364881-44358462 | 20130731
Length = 443
Score = 416 bits (1070), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/219 (90%), Positives = 208/219 (94%)
Query: 1 MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMDDVSSAVTAIQF 60
M EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQAL+QM DV SAV+A+ F
Sbjct: 1 MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALHF 60
Query: 61 YANMQPSIRGRNVYVQFSSHQELTTVDQSQGRGDEPNRILLVTIHHMLYPMTVDVLYQVF 120
Y N QPSIRGRNVYVQFSSHQELTT+DQSQGRGDEPNRILLVTIHH+LYP+TVDVLYQVF
Sbjct: 61 YGNTQPSIRGRNVYVQFSSHQELTTIDQSQGRGDEPNRILLVTIHHVLYPITVDVLYQVF 120
Query: 121 SPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNIYDGCCQLDIQFSNLDELQ 180
SPHGSVEKIVTFQKSAGFQALIQYQS+QS++TAR+ALQGRNIYDGCCQLDIQFSNLDELQ
Sbjct: 121 SPHGSVEKIVTFQKSAGFQALIQYQSQQSSITARTALQGRNIYDGCCQLDIQFSNLDELQ 180
Query: 181 VNYNNDRSRDFTNPNLPTEQKGRPSQPGYGDGGNMYPAQ 219
VNYNNDRSRDFTNPNLPTEQKGRP Q GYGD GNMY Q
Sbjct: 181 VNYNNDRSRDFTNPNLPTEQKGRPPQLGYGDAGNMYGVQ 219
>Medtr1g098530.1 | polypyrimidine tract-binding-like protein | HC |
chr1:44365128-44358462 | 20130731
Length = 443
Score = 416 bits (1070), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/219 (90%), Positives = 208/219 (94%)
Query: 1 MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMDDVSSAVTAIQF 60
M EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQAL+QM DV SAV+A+ F
Sbjct: 1 MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALHF 60
Query: 61 YANMQPSIRGRNVYVQFSSHQELTTVDQSQGRGDEPNRILLVTIHHMLYPMTVDVLYQVF 120
Y N QPSIRGRNVYVQFSSHQELTT+DQSQGRGDEPNRILLVTIHH+LYP+TVDVLYQVF
Sbjct: 61 YGNTQPSIRGRNVYVQFSSHQELTTIDQSQGRGDEPNRILLVTIHHVLYPITVDVLYQVF 120
Query: 121 SPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNIYDGCCQLDIQFSNLDELQ 180
SPHGSVEKIVTFQKSAGFQALIQYQS+QS++TAR+ALQGRNIYDGCCQLDIQFSNLDELQ
Sbjct: 121 SPHGSVEKIVTFQKSAGFQALIQYQSQQSSITARTALQGRNIYDGCCQLDIQFSNLDELQ 180
Query: 181 VNYNNDRSRDFTNPNLPTEQKGRPSQPGYGDGGNMYPAQ 219
VNYNNDRSRDFTNPNLPTEQKGRP Q GYGD GNMY Q
Sbjct: 181 VNYNNDRSRDFTNPNLPTEQKGRPPQLGYGDAGNMYGVQ 219
>Medtr6g043520.1 | polypyrimidine tract-binding-like protein | HC |
chr6:13313766-13323536 | 20130731
Length = 443
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/214 (87%), Positives = 201/214 (93%)
Query: 1 MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMDDVSSAVTAIQF 60
M E SKVIHVRNVGHEISENDLLQLFQPFGV+TKLVMLRAKNQAL+QM DV+SA +AIQF
Sbjct: 1 MAEQSKVIHVRNVGHEISENDLLQLFQPFGVVTKLVMLRAKNQALVQMQDVASADSAIQF 60
Query: 61 YANMQPSIRGRNVYVQFSSHQELTTVDQSQGRGDEPNRILLVTIHHMLYPMTVDVLYQVF 120
Y N QPSIRGRNVYVQFSSH+ELTT+DQ+QGR DEPNRILLVT+H +LYPMTVDVL QVF
Sbjct: 61 YINSQPSIRGRNVYVQFSSHRELTTMDQNQGREDEPNRILLVTVHQVLYPMTVDVLQQVF 120
Query: 121 SPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNIYDGCCQLDIQFSNLDELQ 180
SPHG VEKIVTFQKSAGFQALIQY++RQSAVTAR ALQGRN+YDGCCQLDIQFSNLDELQ
Sbjct: 121 SPHGFVEKIVTFQKSAGFQALIQYETRQSAVTARGALQGRNVYDGCCQLDIQFSNLDELQ 180
Query: 181 VNYNNDRSRDFTNPNLPTEQKGRPSQPGYGDGGN 214
VNYNNDRSRDFTNPNLPT+QKGRPSQ GYGD GN
Sbjct: 181 VNYNNDRSRDFTNPNLPTDQKGRPSQAGYGDAGN 214
>Medtr6g043520.2 | polypyrimidine tract-binding-like protein | HC |
chr6:13313738-13323576 | 20130731
Length = 443
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/214 (87%), Positives = 201/214 (93%)
Query: 1 MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMDDVSSAVTAIQF 60
M E SKVIHVRNVGHEISENDLLQLFQPFGV+TKLVMLRAKNQAL+QM DV+SA +AIQF
Sbjct: 1 MAEQSKVIHVRNVGHEISENDLLQLFQPFGVVTKLVMLRAKNQALVQMQDVASADSAIQF 60
Query: 61 YANMQPSIRGRNVYVQFSSHQELTTVDQSQGRGDEPNRILLVTIHHMLYPMTVDVLYQVF 120
Y N QPSIRGRNVYVQFSSH+ELTT+DQ+QGR DEPNRILLVT+H +LYPMTVDVL QVF
Sbjct: 61 YINSQPSIRGRNVYVQFSSHRELTTMDQNQGREDEPNRILLVTVHQVLYPMTVDVLQQVF 120
Query: 121 SPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNIYDGCCQLDIQFSNLDELQ 180
SPHG VEKIVTFQKSAGFQALIQY++RQSAVTAR ALQGRN+YDGCCQLDIQFSNLDELQ
Sbjct: 121 SPHGFVEKIVTFQKSAGFQALIQYETRQSAVTARGALQGRNVYDGCCQLDIQFSNLDELQ 180
Query: 181 VNYNNDRSRDFTNPNLPTEQKGRPSQPGYGDGGN 214
VNYNNDRSRDFTNPNLPT+QKGRPSQ GYGD GN
Sbjct: 181 VNYNNDRSRDFTNPNLPTDQKGRPSQAGYGDAGN 214
>Medtr6g043520.3 | polypyrimidine tract-binding-like protein | HC |
chr6:13313766-13323536 | 20130731
Length = 443
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/214 (87%), Positives = 201/214 (93%)
Query: 1 MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMDDVSSAVTAIQF 60
M E SKVIHVRNVGHEISENDLLQLFQPFGV+TKLVMLRAKNQAL+QM DV+SA +AIQF
Sbjct: 1 MAEQSKVIHVRNVGHEISENDLLQLFQPFGVVTKLVMLRAKNQALVQMQDVASADSAIQF 60
Query: 61 YANMQPSIRGRNVYVQFSSHQELTTVDQSQGRGDEPNRILLVTIHHMLYPMTVDVLYQVF 120
Y N QPSIRGRNVYVQFSSH+ELTT+DQ+QGR DEPNRILLVT+H +LYPMTVDVL QVF
Sbjct: 61 YINSQPSIRGRNVYVQFSSHRELTTMDQNQGREDEPNRILLVTVHQVLYPMTVDVLQQVF 120
Query: 121 SPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNIYDGCCQLDIQFSNLDELQ 180
SPHG VEKIVTFQKSAGFQALIQY++RQSAVTAR ALQGRN+YDGCCQLDIQFSNLDELQ
Sbjct: 121 SPHGFVEKIVTFQKSAGFQALIQYETRQSAVTARGALQGRNVYDGCCQLDIQFSNLDELQ 180
Query: 181 VNYNNDRSRDFTNPNLPTEQKGRPSQPGYGDGGN 214
VNYNNDRSRDFTNPNLPT+QKGRPSQ GYGD GN
Sbjct: 181 VNYNNDRSRDFTNPNLPTDQKGRPSQAGYGDAGN 214
>Medtr6g037550.1 | polypyrimidine tract-binding-like protein | HC |
chr6:13376655-13370075 | 20130731
Length = 336
Score = 350 bits (898), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 171/216 (79%), Positives = 189/216 (87%), Gaps = 7/216 (3%)
Query: 1 MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMDDVSSAVTAIQF 60
M EPSKVIHVRNVG EI+ENDLL LFQPFGVITKL++LRAKNQ ++ SA+ A++F
Sbjct: 1 MAEPSKVIHVRNVGPEIAENDLLLLFQPFGVITKLMVLRAKNQ------NIPSAIRAVEF 54
Query: 61 YANMQPSIRGRNVYVQFSSHQELTTVDQSQGRGDEPNRILLVTIHHMLYPMTVDVLYQVF 120
YAN QPSIRGRN+YVQFSSH+ +T+ +QSQGR DEPNRILLVTIH +LYPMTVDVL QVF
Sbjct: 55 YANAQPSIRGRNLYVQFSSHRVITSANQSQGREDEPNRILLVTIHQVLYPMTVDVLQQVF 114
Query: 121 SPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNIYDGCCQLDIQFSNLDELQ 180
S HG VEKIVTFQKSAGFQALIQY++RQ AVTAR ALQGRN+YDGCCQLDIQFSNLDELQ
Sbjct: 115 SRHGCVEKIVTFQKSAGFQALIQYETRQGAVTARGALQGRNVYDGCCQLDIQFSNLDELQ 174
Query: 181 VNYNNDRSRDFTNPNLPTEQKGRPSQPGYGDGGNMY 216
VNYNND SRDFTNPNLPTEQKG+ SQ G GD G MY
Sbjct: 175 VNYNNDWSRDFTNPNLPTEQKGQSSQSGSGDAG-MY 209
>Medtr7g011070.1 | polypyrimidine tract-binding-like protein | HC |
chr7:2887135-2878353 | 20130731
Length = 493
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 137/224 (61%), Gaps = 17/224 (7%)
Query: 4 PSKVIHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALLQMDDVSSAVTAIQFY 61
PSKV+H+RN+ E SE +L++L PFG I TK + +NQA ++ D + A++ + +Y
Sbjct: 17 PSKVLHLRNLPWECSEEELVELCSPFGRIVNTKCNVGANRNQAFVEFVDQNQAISMVSYY 76
Query: 62 ANM-QPS-IRGRNVYVQFSSHQELTTVDQSQGRGDEPNRILLVTIHHM-LYPMTVDVLYQ 118
A+ +P+ +RG+ VY+Q+S+ E+ ++ GD P +LLVTI + +++DV++
Sbjct: 77 ASSSEPAQVRGKTVYIQYSNRHEIV---NNKSPGDIPGNVLLVTIEGVEAGDVSIDVIHL 133
Query: 119 VFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNI-------YDGCCQLDI 171
VFS G V KI TF+K+AGFQALIQ+ ++A +AR AL GR+I + G C L I
Sbjct: 134 VFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLRI 193
Query: 172 QFSNLDELQVNYNNDRSRDFTNPNLPTEQKG--RPSQPGYGDGG 213
+S +L + + ++RSRD+TNP LP +QP G G
Sbjct: 194 SYSAHRDLNIKFQSNRSRDYTNPMLPVNHSAIEGAAQPAIGPDG 237
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 104/219 (47%), Gaps = 42/219 (19%)
Query: 21 DLLQL-FQPFGVITKLVMLR--AKNQALLQMDDVSSAVTA--------IQFYANMQPSIR 69
D++ L F FG + K+ A QAL+Q D +A +A I Y + +
Sbjct: 129 DVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYL-LPEHVG 187
Query: 70 GRNVYVQFSSHQELTTVDQSQGRGDEPN-----------------------------RIL 100
N+ + +S+H++L QS D N +L
Sbjct: 188 SCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNHSAIEGAAQPAIGPDGKRIETESNVL 247
Query: 101 LVTIHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGR 160
L +I +M Y +TVDV+ VFS G+V+KI F+K+ QALIQY +A AR AL+G
Sbjct: 248 LASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREALEGH 307
Query: 161 NIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLPT 198
IYDG C+L + +S +L V +D+SRD+T P +P
Sbjct: 308 CIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPA 346
>Medtr6g012590.1 | polypyrimidine tract-binding-like protein | HC |
chr6:3847217-3842747 | 20130731
Length = 449
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 134/224 (59%), Gaps = 17/224 (7%)
Query: 4 PSKVIHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALLQMDDVSSAVTAIQFY 61
PSKV+H RN+ E S+ +L L PFG + TK + +NQA +Q +++ A++ + +Y
Sbjct: 16 PSKVLHFRNLPWECSDEELADLCSPFGKVMSTKCNVGVNQNQAFVQFAELNQAISMVSYY 75
Query: 62 ANM-QPS-IRGRNVYVQFSSHQELTTVDQSQGRGDEPNRILLVTIHHM-LYPMTVDVLYQ 118
A+ +P+ +RG+ VY+Q+S+ + S GD P +LLVTI + +++DV++
Sbjct: 76 ASSSEPAQVRGKTVYIQYSNRHHIVN---SNSPGDIPGNVLLVTIEGVEAGDVSIDVIHL 132
Query: 119 VFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNI-------YDGCCQLDI 171
VFS G V K+ TF+K+AGFQALIQY ++A +A+ +L GR+I + G C L I
Sbjct: 133 VFSAFGFVHKLATFEKTAGFQALIQYTDAETAASAKDSLDGRSIPRYLLPEHVGACNLRI 192
Query: 172 QFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRPS--QPGYGDGG 213
+S +L + + ++RSRD+TNP LP Q S QP G G
Sbjct: 193 SYSAHRDLNIKFQSNRSRDYTNPMLPVNQAAIDSALQPAIGPDG 236
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 56/229 (24%)
Query: 21 DLLQL-FQPFGVITKLVMLR--AKNQALLQMDDVSSAVTAIQFYANMQPSIRGR------ 71
D++ L F FG + KL A QAL+Q D +A +A + S+ GR
Sbjct: 128 DVIHLVFSAFGFVHKLATFEKTAGFQALIQYTDAETAASA-------KDSLDGRSIPRYL 180
Query: 72 --------NVYVQFSSHQELTTVDQSQ-----------------------------GRGD 94
N+ + +S+H++L QS R +
Sbjct: 181 LPEHVGACNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNQAAIDSALQPAIGPDGKRKE 240
Query: 95 EPNRILLVTIHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTAR 154
+ +LL TI +M Y + +DVL+ VFS G V+K+ F K+ ALIQY A A+
Sbjct: 241 HKSNVLLATIENMQYAVPLDVLHSVFSAFGFVQKVAMFDKNGHTHALIQYPDLTIAAAAK 300
Query: 155 SALQGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFT--NPNLPTEQ 200
L+G IYDG C+L + +S +L V +D+SRD+T +P+L Q
Sbjct: 301 ETLEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVLDPSLHAAQ 349
>Medtr3g090960.1 | polypyrimidine tract-binding-like protein | HC |
chr3:41318727-41325407 | 20130731
Length = 504
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 130/211 (61%), Gaps = 15/211 (7%)
Query: 4 PSKVIHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALLQMDDVSSAVTAIQFY 61
PSKV+H+RN+ E +E +L++L PFG + TK + +NQA ++ D++ A+ I +Y
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGNPFGKVVNTKCNVGSNRNQAFIEFADLNQAIAMISYY 75
Query: 62 ANM-QPS-IRGRNVYVQFSSHQELTTVDQSQGRGDEPNRILLVTIH-HMLYPMTVDVLYQ 118
A+ +P+ +RG+ VY+Q+S+ QE+ ++ D +LLVT+ +++DVL+
Sbjct: 76 ASSSEPAQVRGKTVYLQYSNRQEIV---HNKTAADVAGNVLLVTVEGEDARLVSIDVLHL 132
Query: 119 VFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNI-------YDGCCQLDI 171
VFS G V KI TF+K+AGFQAL+Q+ ++A +A+ AL GR+I + G C L I
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLSEHVGPCTLKI 192
Query: 172 QFSNLDELQVNYNNDRSRDFTNPNLPTEQKG 202
+S +L V + + RSRD+TNP LP Q
Sbjct: 193 TYSGHSDLTVKFQSHRSRDYTNPYLPVAQSA 223
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 107/224 (47%), Gaps = 54/224 (24%)
Query: 21 DLLQL-FQPFGVITKLVMLR--AKNQALLQMDDVSSAVTAIQFYANMQPSIRGRNV---- 73
D+L L F FG + K+ A QAL+Q D +A +A + ++ GR++
Sbjct: 128 DVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSA-------KDALDGRSIPRYL 180
Query: 74 ----------YVQFSSHQELTTVDQSQGRGDEPN-------------------------- 97
+ +S H +LT QS D N
Sbjct: 181 LSEHVGPCTLKITYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLE 240
Query: 98 ---RILLVTIHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTAR 154
+LL +I +M Y +T+DVL+ VFS G ++KI F K+ G QALIQY Q+AV A+
Sbjct: 241 AESNVLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAK 300
Query: 155 SALQGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
AL+G IYDG C+L + +S +L + NNDRSRD+T P +P
Sbjct: 301 EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIP 344
>Medtr3g090960.2 | polypyrimidine tract-binding-like protein | HC |
chr3:41318636-41325138 | 20130731
Length = 504
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 130/211 (61%), Gaps = 15/211 (7%)
Query: 4 PSKVIHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALLQMDDVSSAVTAIQFY 61
PSKV+H+RN+ E +E +L++L PFG + TK + +NQA ++ D++ A+ I +Y
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGNPFGKVVNTKCNVGSNRNQAFIEFADLNQAIAMISYY 75
Query: 62 ANM-QPS-IRGRNVYVQFSSHQELTTVDQSQGRGDEPNRILLVTIH-HMLYPMTVDVLYQ 118
A+ +P+ +RG+ VY+Q+S+ QE+ ++ D +LLVT+ +++DVL+
Sbjct: 76 ASSSEPAQVRGKTVYLQYSNRQEIV---HNKTAADVAGNVLLVTVEGEDARLVSIDVLHL 132
Query: 119 VFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNI-------YDGCCQLDI 171
VFS G V KI TF+K+AGFQAL+Q+ ++A +A+ AL GR+I + G C L I
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLSEHVGPCTLKI 192
Query: 172 QFSNLDELQVNYNNDRSRDFTNPNLPTEQKG 202
+S +L V + + RSRD+TNP LP Q
Sbjct: 193 TYSGHSDLTVKFQSHRSRDYTNPYLPVAQSA 223
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 107/224 (47%), Gaps = 54/224 (24%)
Query: 21 DLLQL-FQPFGVITKLVMLR--AKNQALLQMDDVSSAVTAIQFYANMQPSIRGRNV---- 73
D+L L F FG + K+ A QAL+Q D +A +A + ++ GR++
Sbjct: 128 DVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSA-------KDALDGRSIPRYL 180
Query: 74 ----------YVQFSSHQELTTVDQSQGRGDEPN-------------------------- 97
+ +S H +LT QS D N
Sbjct: 181 LSEHVGPCTLKITYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLE 240
Query: 98 ---RILLVTIHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTAR 154
+LL +I +M Y +T+DVL+ VFS G ++KI F K+ G QALIQY Q+AV A+
Sbjct: 241 AESNVLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAK 300
Query: 155 SALQGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
AL+G IYDG C+L + +S +L + NNDRSRD+T P +P
Sbjct: 301 EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIP 344
>Medtr1g028440.1 | polypyrimidine tract-binding-like protein | HC |
chr1:9601447-9594292 | 20130731
Length = 430
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 131/211 (62%), Gaps = 15/211 (7%)
Query: 4 PSKVIHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALLQMDDVSSAVTAIQFY 61
PSKV+H+RN+ E E +L++L +PFG + TK + +NQA ++ D++ A+ I +Y
Sbjct: 16 PSKVLHLRNLPWECIEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYY 75
Query: 62 ANM-QPS-IRGRNVYVQFSSHQELTTVDQSQGRGDEPNRILLVTIH-HMLYPMTVDVLYQ 118
A+ +P+ +RG+ VY+Q+S+ QE+ ++ D +LLVTI +++DVL+
Sbjct: 76 ASSSEPAQVRGKTVYLQYSNRQEIVN---NKTAADVAGNVLLVTIEGEDARLVSIDVLHL 132
Query: 119 VFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNI-------YDGCCQLDI 171
VFS G V KI TF+K+AGFQAL+Q+ +++A +A+ AL GR+I + G C L I
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDQETATSAKDALDGRSIPSYLLAGHVGPCTLKI 192
Query: 172 QFSNLDELQVNYNNDRSRDFTNPNLPTEQKG 202
+S +L V + + RSRD+TNP LP Q
Sbjct: 193 TYSGHSDLSVKFQSHRSRDYTNPYLPVAQSA 223
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 109/224 (48%), Gaps = 54/224 (24%)
Query: 21 DLLQL-FQPFGVITKLVMLR--AKNQALLQMDDVSSAVTAIQFYANMQPSIRGRNV---- 73
D+L L F FG + K+ A QAL+Q D +A +A + ++ GR++
Sbjct: 128 DVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDQETATSA-------KDALDGRSIPSYL 180
Query: 74 ----------YVQFSSHQELTTVDQS------------------QGRG-----------D 94
+ +S H +L+ QS +G G +
Sbjct: 181 LAGHVGPCTLKITYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQSVMGLDGKRLE 240
Query: 95 EPNRILLVTIHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTAR 154
+ +LL +I +M Y +T+DVL+ VFS G ++KI F K+ G QAL+QY Q+A+ A+
Sbjct: 241 AESNVLLASIENMQYAVTLDVLHMVFSSFGPIQKIAMFDKNGGLQALVQYPDVQTAIVAK 300
Query: 155 SALQGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
AL+G IYDG C+L + +S +L + NNDRSRD+T P P
Sbjct: 301 EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTMPTAP 344
>Medtr3g090960.3 | polypyrimidine tract-binding-like protein | HC |
chr3:41318727-41325138 | 20130731
Length = 374
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 53/221 (23%)
Query: 23 LQLFQPFGVITKLVMLR--AKNQALLQMDDVSSAVTAIQFYANMQPSIRGRNV------- 73
+Q+F FG + K+ A QAL+Q D +A +A + ++ GR++
Sbjct: 1 MQVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSA-------KDALDGRSIPRYLLSE 53
Query: 74 -------YVQFSSHQELTTVDQS------------------QGRG-----------DEPN 97
+ +S H +LT QS +G G + +
Sbjct: 54 HVGPCTLKITYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLEAES 113
Query: 98 RILLVTIHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSAL 157
+LL +I +M Y +T+DVL+ VFS G ++KI F K+ G QALIQY Q+AV A+ AL
Sbjct: 114 NVLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEAL 173
Query: 158 QGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
+G IYDG C+L + +S +L + NNDRSRD+T P +P
Sbjct: 174 EGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIP 214
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 7/90 (7%)
Query: 118 QVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNI-------YDGCCQLD 170
QVFS G V KI TF+K+AGFQAL+Q+ ++A +A+ AL GR+I + G C L
Sbjct: 2 QVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLSEHVGPCTLK 61
Query: 171 IQFSNLDELQVNYNNDRSRDFTNPNLPTEQ 200
I +S +L V + + RSRD+TNP LP Q
Sbjct: 62 ITYSGHSDLTVKFQSHRSRDYTNPYLPVAQ 91
>Medtr3g090960.4 | polypyrimidine tract-binding-like protein | HC |
chr3:41318636-41325325 | 20130731
Length = 374
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 53/221 (23%)
Query: 23 LQLFQPFGVITKLVMLR--AKNQALLQMDDVSSAVTAIQFYANMQPSIRGRNV------- 73
+Q+F FG + K+ A QAL+Q D +A +A + ++ GR++
Sbjct: 1 MQVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSA-------KDALDGRSIPRYLLSE 53
Query: 74 -------YVQFSSHQELTTVDQS------------------QGRG-----------DEPN 97
+ +S H +LT QS +G G + +
Sbjct: 54 HVGPCTLKITYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLEAES 113
Query: 98 RILLVTIHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSAL 157
+LL +I +M Y +T+DVL+ VFS G ++KI F K+ G QALIQY Q+AV A+ AL
Sbjct: 114 NVLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEAL 173
Query: 158 QGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
+G IYDG C+L + +S +L + NNDRSRD+T P +P
Sbjct: 174 EGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIP 214
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 7/90 (7%)
Query: 118 QVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNI-------YDGCCQLD 170
QVFS G V KI TF+K+AGFQAL+Q+ ++A +A+ AL GR+I + G C L
Sbjct: 2 QVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLSEHVGPCTLK 61
Query: 171 IQFSNLDELQVNYNNDRSRDFTNPNLPTEQ 200
I +S +L V + + RSRD+TNP LP Q
Sbjct: 62 ITYSGHSDLTVKFQSHRSRDYTNPYLPVAQ 91
>Medtr3g090960.5 | polypyrimidine tract-binding-like protein | HC |
chr3:41318727-41325407 | 20130731
Length = 374
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 53/221 (23%)
Query: 23 LQLFQPFGVITKLVMLR--AKNQALLQMDDVSSAVTAIQFYANMQPSIRGRNV------- 73
+Q+F FG + K+ A QAL+Q D +A +A + ++ GR++
Sbjct: 1 MQVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSA-------KDALDGRSIPRYLLSE 53
Query: 74 -------YVQFSSHQELTTVDQS------------------QGRG-----------DEPN 97
+ +S H +LT QS +G G + +
Sbjct: 54 HVGPCTLKITYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLEAES 113
Query: 98 RILLVTIHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSAL 157
+LL +I +M Y +T+DVL+ VFS G ++KI F K+ G QALIQY Q+AV A+ AL
Sbjct: 114 NVLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEAL 173
Query: 158 QGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
+G IYDG C+L + +S +L + NNDRSRD+T P +P
Sbjct: 174 EGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIP 214
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 7/90 (7%)
Query: 118 QVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSALQGRNI-------YDGCCQLD 170
QVFS G V KI TF+K+AGFQAL+Q+ ++A +A+ AL GR+I + G C L
Sbjct: 2 QVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLSEHVGPCTLK 61
Query: 171 IQFSNLDELQVNYNNDRSRDFTNPNLPTEQ 200
I +S +L V + + RSRD+TNP LP Q
Sbjct: 62 ITYSGHSDLTVKFQSHRSRDYTNPYLPVAQ 91