Miyakogusa Predicted Gene

Lj5g3v1889560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1889560.1 Non Characterized Hit- tr|D8SX59|D8SX59_SELML
Putative uncharacterized protein OS=Selaginella
moelle,46.23,8e-19,seg,NULL; DUF1475,Protein of unknown function
DUF1475,CUFF.56119.1
         (200 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g097430.4 | transmembrane protein, putative | HC | chr1:43...   202   2e-52
Medtr1g097430.1 | transmembrane protein, putative | HC | chr1:43...   202   2e-52
Medtr1g097430.2 | transmembrane protein, putative | HC | chr1:43...   201   3e-52
Medtr1g097430.3 | transmembrane protein, putative | HC | chr1:43...   194   4e-50

>Medtr1g097430.4 | transmembrane protein, putative | HC |
           chr1:43953316-43959197 | 20130731
          Length = 264

 Score =  202 bits (513), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 100/138 (72%), Positives = 112/138 (81%), Gaps = 2/138 (1%)

Query: 5   SSQASSEDLIYYVLLRTPHKNDPELKGKLSFVVMLRILFSILGVVMLGTLVYTLVTAGSP 64
           SSQ SS+D +YYVLLR PHK+  E K K S V  LRILF ILGVVMLGTLVYTLVT GSP
Sbjct: 100 SSQESSQDPMYYVLLRQPHKSGTEPKTKCSIVATLRILFGILGVVMLGTLVYTLVTDGSP 159

Query: 65  FRMEIFTPWMSATLIDFYVNVVALAVWVTYKEPSWICAVFWIILLICFGSIATCTYIVWK 124
           FR E+ TPWM ATL+DFY+NVVALAVWV YKE SWI AVFW+ILLICFGSI +C Y+V +
Sbjct: 160 FRTELLTPWMDATLVDFYINVVALAVWVAYKESSWIYAVFWVILLICFGSITSCMYVVLQ 219

Query: 125 LLQI--QDPAYLVLVRQA 140
           L QI  QDPAYL+LVR +
Sbjct: 220 LFQISSQDPAYLILVRHS 237



 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 84/124 (67%), Gaps = 6/124 (4%)

Query: 31  GKLSFVVMLRILFSILGVVMLGTLVYTLVTAGSPFRMEIFTPWMSATLIDFYVNVVALAV 90
             +S    L+ LFS+LG +ML  ++YT++T G PFR E+ TPWM+ATLIDFY+N+  L+ 
Sbjct: 2   ATISLANGLKTLFSVLGTIMLAIVLYTVITDGLPFRKELLTPWMAATLIDFYINIAILSA 61

Query: 91  WVTYKEPSWICAVFWIILLICFGSIATCTYIVWKLLQI------QDPAYLVLVRQAVKVT 144
           WV YKE +WI ++ WIILLI  GSIAT  YIV + L++      QDP Y VL+RQ  K  
Sbjct: 62  WVIYKEANWISSILWIILLIGLGSIATSAYIVVQFLKLSSQESSQDPMYYVLLRQPHKSG 121

Query: 145 CKPE 148
            +P+
Sbjct: 122 TEPK 125


>Medtr1g097430.1 | transmembrane protein, putative | HC |
           chr1:43953316-43959197 | 20130731
          Length = 242

 Score =  202 bits (513), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 100/138 (72%), Positives = 112/138 (81%), Gaps = 2/138 (1%)

Query: 5   SSQASSEDLIYYVLLRTPHKNDPELKGKLSFVVMLRILFSILGVVMLGTLVYTLVTAGSP 64
           SSQ SS+D +YYVLLR PHK+  E K K S V  LRILF ILGVVMLGTLVYTLVT GSP
Sbjct: 100 SSQESSQDPMYYVLLRQPHKSGTEPKTKCSIVATLRILFGILGVVMLGTLVYTLVTDGSP 159

Query: 65  FRMEIFTPWMSATLIDFYVNVVALAVWVTYKEPSWICAVFWIILLICFGSIATCTYIVWK 124
           FR E+ TPWM ATL+DFY+NVVALAVWV YKE SWI AVFW+ILLICFGSI +C Y+V +
Sbjct: 160 FRTELLTPWMDATLVDFYINVVALAVWVAYKESSWIYAVFWVILLICFGSITSCMYVVLQ 219

Query: 125 LLQI--QDPAYLVLVRQA 140
           L QI  QDPAYL+LVR +
Sbjct: 220 LFQISSQDPAYLILVRHS 237



 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 84/124 (67%), Gaps = 6/124 (4%)

Query: 31  GKLSFVVMLRILFSILGVVMLGTLVYTLVTAGSPFRMEIFTPWMSATLIDFYVNVVALAV 90
             +S    L+ LFS+LG +ML  ++YT++T G PFR E+ TPWM+ATLIDFY+N+  L+ 
Sbjct: 2   ATISLANGLKTLFSVLGTIMLAIVLYTVITDGLPFRKELLTPWMAATLIDFYINIAILSA 61

Query: 91  WVTYKEPSWICAVFWIILLICFGSIATCTYIVWKLLQI------QDPAYLVLVRQAVKVT 144
           WV YKE +WI ++ WIILLI  GSIAT  YIV + L++      QDP Y VL+RQ  K  
Sbjct: 62  WVIYKEANWISSILWIILLIGLGSIATSAYIVVQFLKLSSQESSQDPMYYVLLRQPHKSG 121

Query: 145 CKPE 148
            +P+
Sbjct: 122 TEPK 125


>Medtr1g097430.2 | transmembrane protein, putative | HC |
           chr1:43953374-43959038 | 20130731
          Length = 198

 Score =  201 bits (512), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 100/138 (72%), Positives = 112/138 (81%), Gaps = 2/138 (1%)

Query: 5   SSQASSEDLIYYVLLRTPHKNDPELKGKLSFVVMLRILFSILGVVMLGTLVYTLVTAGSP 64
           SSQ SS+D +YYVLLR PHK+  E K K S V  LRILF ILGVVMLGTLVYTLVT GSP
Sbjct: 56  SSQESSQDPMYYVLLRQPHKSGTEPKTKCSIVATLRILFGILGVVMLGTLVYTLVTDGSP 115

Query: 65  FRMEIFTPWMSATLIDFYVNVVALAVWVTYKEPSWICAVFWIILLICFGSIATCTYIVWK 124
           FR E+ TPWM ATL+DFY+NVVALAVWV YKE SWI AVFW+ILLICFGSI +C Y+V +
Sbjct: 116 FRTELLTPWMDATLVDFYINVVALAVWVAYKESSWIYAVFWVILLICFGSITSCMYVVLQ 175

Query: 125 LLQI--QDPAYLVLVRQA 140
           L QI  QDPAYL+LVR +
Sbjct: 176 LFQISSQDPAYLILVRHS 193



 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 6/81 (7%)

Query: 74  MSATLIDFYVNVVALAVWVTYKEPSWICAVFWIILLICFGSIATCTYIVWKLLQI----- 128
           M+ATLIDFY+N+  L+ WV YKE +WI ++ WIILLI  GSIAT  YIV + L++     
Sbjct: 1   MAATLIDFYINIAILSAWVIYKEANWISSILWIILLIGLGSIATSAYIVVQFLKLSSQES 60

Query: 129 -QDPAYLVLVRQAVKVTCKPE 148
            QDP Y VL+RQ  K   +P+
Sbjct: 61  SQDPMYYVLLRQPHKSGTEPK 81


>Medtr1g097430.3 | transmembrane protein, putative | HC |
           chr1:43953374-43958491 | 20130731
          Length = 251

 Score =  194 bits (493), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 100/147 (68%), Positives = 112/147 (76%), Gaps = 11/147 (7%)

Query: 5   SSQASSEDLIYYVLLRTPHK---------NDPELKGKLSFVVMLRILFSILGVVMLGTLV 55
           SSQ SS+D +YYVLLR PHK         +  E K K S V  LRILF ILGVVMLGTLV
Sbjct: 100 SSQESSQDPMYYVLLRQPHKYVYKKTTIESGTEPKTKCSIVATLRILFGILGVVMLGTLV 159

Query: 56  YTLVTAGSPFRMEIFTPWMSATLIDFYVNVVALAVWVTYKEPSWICAVFWIILLICFGSI 115
           YTLVT GSPFR E+ TPWM ATL+DFY+NVVALAVWV YKE SWI AVFW+ILLICFGSI
Sbjct: 160 YTLVTDGSPFRTELLTPWMDATLVDFYINVVALAVWVAYKESSWIYAVFWVILLICFGSI 219

Query: 116 ATCTYIVWKLLQI--QDPAYLVLVRQA 140
            +C Y+V +L QI  QDPAYL+LVR +
Sbjct: 220 TSCMYVVLQLFQISSQDPAYLILVRHS 246



 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/122 (50%), Positives = 82/122 (67%), Gaps = 6/122 (4%)

Query: 31  GKLSFVVMLRILFSILGVVMLGTLVYTLVTAGSPFRMEIFTPWMSATLIDFYVNVVALAV 90
             +S    L+ LFS+LG +ML  ++YT++T G PFR E+ TPWM+ATLIDFY+N+  L+ 
Sbjct: 2   ATISLANGLKTLFSVLGTIMLAIVLYTVITDGLPFRKELLTPWMAATLIDFYINIAILSA 61

Query: 91  WVTYKEPSWICAVFWIILLICFGSIATCTYIVWKLLQI------QDPAYLVLVRQAVKVT 144
           WV YKE +WI ++ WIILLI  GSIAT  YIV + L++      QDP Y VL+RQ  K  
Sbjct: 62  WVIYKEANWISSILWIILLIGLGSIATSAYIVVQFLKLSSQESSQDPMYYVLLRQPHKYV 121

Query: 145 CK 146
            K
Sbjct: 122 YK 123