Miyakogusa Predicted Gene

Lj5g3v1889490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1889490.1 Non Characterized Hit- tr|G7KHN4|G7KHN4_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,61.64,1e-18,seg,NULL,CUFF.56114.1
         (170 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g097400.2 | transmembrane protein, putative | HC | chr1:43...   226   8e-60
Medtr1g097400.1 | transmembrane protein, putative | HC | chr1:43...   226   8e-60
Medtr6g034680.1 | transmembrane protein, putative | HC | chr6:14...   206   6e-54

>Medtr1g097400.2 | transmembrane protein, putative | HC |
           chr1:43943109-43940099 | 20130731
          Length = 179

 Score =  226 bits (576), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 110/155 (70%), Positives = 128/155 (82%), Gaps = 4/155 (2%)

Query: 20  VEIHLFRQGRGPIAVFKSQLGGSERDRLEVRDILHHHFLKSIFAFNPQSGRAAPIRFNPK 79
           VEIHLFRQG GPIAVF+S+LGG E++RLEVR+ILH + LKSIFAFNP+SGRA PIRFNPK
Sbjct: 25  VEIHLFRQGEGPIAVFESELGGCEQNRLEVREILHKYSLKSIFAFNPRSGRAVPIRFNPK 84

Query: 80  DGTSVLPYRHGAVLYIDAEPKDSLLKPVTRILVGVLLITIMIMLVWKDI----PEWIKNF 135
            G SVL YR+ AVLYID EPK+SLLKPV RILVGV LI IM+MLV+ DI     EW++  
Sbjct: 85  TGYSVLSYRNAAVLYIDGEPKESLLKPVYRILVGVALIAIMLMLVYGDIGISTAEWVQKL 144

Query: 136 NVSGVNFSPWIVACVVIVFTRMRKRTKGFLKNFGL 170
           NVSGV++ P IVACVV+VF+RMR RT+ FLK  GL
Sbjct: 145 NVSGVDYPPLIVACVVVVFSRMRHRTRRFLKRLGL 179


>Medtr1g097400.1 | transmembrane protein, putative | HC |
           chr1:43943109-43940099 | 20130731
          Length = 179

 Score =  226 bits (576), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 110/155 (70%), Positives = 128/155 (82%), Gaps = 4/155 (2%)

Query: 20  VEIHLFRQGRGPIAVFKSQLGGSERDRLEVRDILHHHFLKSIFAFNPQSGRAAPIRFNPK 79
           VEIHLFRQG GPIAVF+S+LGG E++RLEVR+ILH + LKSIFAFNP+SGRA PIRFNPK
Sbjct: 25  VEIHLFRQGEGPIAVFESELGGCEQNRLEVREILHKYSLKSIFAFNPRSGRAVPIRFNPK 84

Query: 80  DGTSVLPYRHGAVLYIDAEPKDSLLKPVTRILVGVLLITIMIMLVWKDI----PEWIKNF 135
            G SVL YR+ AVLYID EPK+SLLKPV RILVGV LI IM+MLV+ DI     EW++  
Sbjct: 85  TGYSVLSYRNAAVLYIDGEPKESLLKPVYRILVGVALIAIMLMLVYGDIGISTAEWVQKL 144

Query: 136 NVSGVNFSPWIVACVVIVFTRMRKRTKGFLKNFGL 170
           NVSGV++ P IVACVV+VF+RMR RT+ FLK  GL
Sbjct: 145 NVSGVDYPPLIVACVVVVFSRMRHRTRRFLKRLGL 179


>Medtr6g034680.1 | transmembrane protein, putative | HC |
           chr6:14244721-14239419 | 20130731
          Length = 194

 Score =  206 bits (525), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 98/151 (64%), Positives = 122/151 (80%), Gaps = 1/151 (0%)

Query: 20  VEIHLFRQGRGPIAVFKSQLGGSERDRLEVRDILHHHFLKSIFAFNPQSG-RAAPIRFNP 78
           VEIHLFRQG+GPI VFKS LGG E+D+LEV DIL  H LK++FAFN Q+  R  P+RFNP
Sbjct: 43  VEIHLFRQGKGPIVVFKSALGGWEQDQLEVGDILEKHGLKTVFAFNHQTRVRGVPVRFNP 102

Query: 79  KDGTSVLPYRHGAVLYIDAEPKDSLLKPVTRILVGVLLITIMIMLVWKDIPEWIKNFNVS 138
           ++G S+L YR GAV+Y+D EPKDSL+KP+TRIL+GV +IT+MI++V ++ PEW+  FN S
Sbjct: 103 RNGRSILTYRDGAVVYLDGEPKDSLIKPITRILIGVAIITLMIVIVSRETPEWMNKFNFS 162

Query: 139 GVNFSPWIVACVVIVFTRMRKRTKGFLKNFG 169
             NFSPW++ACVVIVFTRMRKRTK F    G
Sbjct: 163 PGNFSPWVLACVVIVFTRMRKRTKDFFTKRG 193