Miyakogusa Predicted Gene
- Lj5g3v1889470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1889470.1 tr|G7L070|G7L070_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_7g055830 PE=4 SV=1,38.1,0.0000003, ,CUFF.56112.1
(102 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g055870.1 | F-box protein interaction domain protein | LC ... 59 9e-10
Medtr7g055830.1 | F-box protein interaction domain protein | LC ... 59 9e-10
Medtr7g055930.1 | F-box protein interaction domain protein | LC ... 59 1e-09
Medtr7g078860.1 | F-box protein interaction domain protein | LC ... 55 2e-08
Medtr7g078900.1 | F-box protein interaction domain protein | LC ... 55 2e-08
Medtr7g055953.1 | F-box protein interaction domain protein | LC ... 54 2e-08
Medtr7g077970.1 | F-box protein interaction domain protein | LC ... 54 3e-08
Medtr4g013185.1 | F-box protein interaction domain protein | LC ... 54 3e-08
Medtr3g464500.1 | F-box protein interaction domain protein | HC ... 53 5e-08
Medtr7g078040.1 | F-box and associated interaction domain protei... 53 6e-08
Medtr7g061100.1 | F-box and associated interaction domain protei... 52 9e-08
Medtr2g047200.1 | F-box protein interaction domain protein | LC ... 52 1e-07
Medtr4g129160.1 | F-box protein interaction domain protein | LC ... 51 2e-07
Medtr7g445890.1 | F-box protein interaction domain protein | LC ... 51 2e-07
Medtr2g047892.1 | F-box protein interaction domain protein | LC ... 51 2e-07
Medtr7g061050.1 | F-box protein interaction domain protein | LC ... 51 3e-07
Medtr1g088120.1 | F-box protein interaction domain protein | LC ... 51 3e-07
Medtr2g047895.1 | F-box protein interaction domain protein | LC ... 50 3e-07
Medtr7g056173.1 | F-box protein interaction domain protein | LC ... 50 4e-07
Medtr3g024130.1 | F-box protein interaction domain protein | LC ... 50 4e-07
Medtr4g020000.1 | F-box protein interaction domain protein | LC ... 50 5e-07
Medtr0242s0060.1 | F-box protein interaction domain protein | HC... 50 5e-07
Medtr0242s0040.1 | F-box protein interaction domain protein | HC... 50 5e-07
Medtr5g043160.1 | F-box protein interaction domain protein | LC ... 50 6e-07
Medtr1g055375.1 | F-box protein interaction domain protein | LC ... 49 7e-07
Medtr5g058620.1 | F-box protein interaction domain protein | LC ... 49 9e-07
Medtr1g058870.1 | F-box protein interaction domain protein | LC ... 49 9e-07
Medtr0097s0030.1 | F-box and associated interaction domain prote... 49 1e-06
Medtr2g047240.1 | F-box and associated interaction domain protei... 49 1e-06
Medtr7g061090.1 | F-box protein interaction domain protein | LC ... 49 1e-06
Medtr7g066840.1 | F-box protein interaction domain protein | LC ... 49 1e-06
Medtr4g013175.1 | F-box protein interaction domain protein | LC ... 49 1e-06
Medtr7g056003.1 | F-box protein interaction domain protein | LC ... 48 2e-06
Medtr7g062060.1 | F-box protein interaction domain protein | LC ... 48 2e-06
Medtr7g077990.1 | F-box and associated interaction domain protei... 48 2e-06
Medtr4g030830.1 | F-box protein interaction domain protein | LC ... 48 2e-06
Medtr7g056503.1 | F-box protein interaction domain protein | LC ... 48 3e-06
Medtr3g464470.1 | F-box protein interaction domain protein | LC ... 47 3e-06
Medtr4g030980.1 | F-box protein interaction domain protein | LC ... 47 4e-06
Medtr3g030320.1 | F-box protein interaction domain protein | LC ... 47 4e-06
Medtr5g046280.1 | F-box protein interaction domain protein | LC ... 46 7e-06
Medtr5g011200.1 | F-box protein interaction domain protein | HC ... 46 8e-06
Medtr7g070440.1 | F-box protein interaction domain protein | LC ... 46 1e-05
>Medtr7g055870.1 | F-box protein interaction domain protein | LC |
chr7:18983989-18982709 | 20130731
Length = 426
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 8 VNVYNMGDRRWRRIQ---VSPF------PSLHLERGVAVYVSNTLNWLA---TIPADIMQ 55
V V+N+GD WR IQ V+PF P HL VYVS T+NWLA P +
Sbjct: 208 VRVFNLGDNVWRHIQSFPVAPFMDISTCPHTHLGINAGVYVSGTVNWLAIRNACPCNFEL 267
Query: 56 ENLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
+++ ID + I+S DL E Q LP E EP L L
Sbjct: 268 KSITIDQFVIISLDLRTETYNQFLLPLG---FDEVTSVEPTLSFL 309
>Medtr7g055830.1 | F-box protein interaction domain protein | LC |
chr7:18998625-18997349 | 20130731
Length = 360
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 8 VNVYNMGDRRWRRIQ---VSPF------PSLHLERGVAVYVSNTLNWLA---TIPADIMQ 55
V V+N+GD WR IQ V+PF P HL VYVS T+NWLA P +
Sbjct: 140 VRVFNLGDNVWRHIQSFPVAPFMDISTSPHTHLGINAGVYVSGTVNWLAIRNACPCNFEL 199
Query: 56 ENLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
+++ ID + I+S DL E Q LP E EP L L
Sbjct: 200 KSITIDQFVIISLDLRTETYNQFLLPLG---FDEVTSVEPTLSFL 241
>Medtr7g055930.1 | F-box protein interaction domain protein | LC |
chr7:18953942-18952662 | 20130731
Length = 426
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 49/105 (46%), Gaps = 15/105 (14%)
Query: 8 VNVYNMGDRRWRRIQ---VSPF------PSLHLERGVAVYVSNTLNWLA---TIPADIMQ 55
V V+N GD WR IQ V+PF P HL VYVS T+NWLA P +
Sbjct: 208 VRVFNFGDNVWRHIQSFPVAPFMDISTCPHTHLGINAGVYVSGTVNWLAIRNACPCNFEL 267
Query: 56 ENLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
+++ ID + I+S DL E Q LP E EP L L
Sbjct: 268 KSITIDQFVIISLDLRTETYNQFLLPLG---FDEVTSVEPTLSFL 309
>Medtr7g078860.1 | F-box protein interaction domain protein | LC |
chr7:29866344-29867525 | 20130731
Length = 393
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/101 (39%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 5 KTMVNVYNMGDRRWRRIQVSPFPSLHLERGVA-VYVSNTLNWLATIPADIMQE----NLG 59
K V V N GD RWR I+ P L + V VY+S T+NWLA E ++
Sbjct: 188 KNDVRVLNFGDDRWRNIESFPAVPLQIYTVVDYVYLSGTINWLAIHNEYCYPESNIKDIT 247
Query: 60 IDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
+D + IVS DLG E+ Q LP S E PI+GVL
Sbjct: 248 VDQFVIVSLDLGTEKYNQYRLPPS---FDEVPSAYPIVGVL 285
>Medtr7g078900.1 | F-box protein interaction domain protein | LC |
chr7:29880322-29882322 | 20130731
Length = 424
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 5 KTMVNVYNMGDRRWRRIQVSPFPSLHLERG-VAVYVSNTLNWLATIPADIMQ----ENLG 59
K+ V V N+GD WR I+ P L L G VY+S T+NWLA +++
Sbjct: 201 KSEVRVLNLGDDVWRNIESFPLTPLCLSHGDNHVYLSGTINWLAIHDEYWYNVSNVKDIT 260
Query: 60 IDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
+D + IVS DLG E Q LP S E PI+GVL
Sbjct: 261 VDQFVIVSLDLGTETYNQYRLPPS---FDEVPPARPIVGVL 298
>Medtr7g055953.1 | F-box protein interaction domain protein | LC |
chr7:19326829-19325757 | 20130731
Length = 316
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 1 MLFEKTMVNVYNMGDRRWRRIQVSPFP------SLHLERGVAVYVSNTLNWLATIPADIM 54
+L + V V+++ D WR+I S FP +L + VY+S T+NW A
Sbjct: 104 VLLSSSEVKVFSLSDNIWRKI--SSFPPFDHAVTLGFSKNEGVYLSGTVNWFALRSKSSY 161
Query: 55 QENLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
+++ ++ + I+S DLG E Q +PR + E Y P + VL
Sbjct: 162 NKDITVEQFMIISLDLGTETYKQFQ---TPRGVDEVPYVAPTIAVL 204
>Medtr7g077970.1 | F-box protein interaction domain protein | LC |
chr7:29446639-29445368 | 20130731
Length = 423
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 10 VYNMGDRRWRRIQVSPFPSLHLERG-----VAVYVSNTLNWLATIPA-DIMQENLGIDMY 63
+ ++GD WR+IQ P LH G +VY+S TLNWLA D +NL ++ +
Sbjct: 198 ILSIGDNVWRQIQSFPVVPLHFYLGGKAVHDSVYLSGTLNWLAIRNEFDYDIKNLRVEQF 257
Query: 64 TIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVLRG 102
IVSFDLG E Q L P E PI+ VL G
Sbjct: 258 VIVSFDLGTETFSQYRL---PSDFDEMPPMMPIVSVLGG 293
>Medtr4g013185.1 | F-box protein interaction domain protein | LC |
chr4:3564735-3568036 | 20130731
Length = 427
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 14/108 (12%)
Query: 5 KTMVNVYNMGDRRWRRIQVSPFPSLHLE-RGVA---VYVSNTLNWLAT---IP----ADI 53
K+ V V+++GD WR I+ P L L+ +G V+++ TLNWLA IP D
Sbjct: 199 KSEVRVFSLGDNVWRNIESFPAVPLRLDYQGFGHTDVFLNGTLNWLAVHNDIPITWFGDP 258
Query: 54 MQENLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVLR 101
E++ ++ IVS DLG E Q LP E EP +GVLR
Sbjct: 259 AVEDITVEQIVIVSLDLGTESYKQYRLPLG---FDEVPTEEPTVGVLR 303
>Medtr3g464500.1 | F-box protein interaction domain protein | HC |
chr3:25916286-25915072 | 20130731
Length = 404
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 2 LFEKTMVNVYNMGDRRWRRIQVSPFPSL---HLERGVAVYVSNTLNWLAT---IPADIMQ 55
++ ++V V +MGD WR IQ P L H ++ VY+S T+NWLA +D
Sbjct: 189 VYGTSVVKVLSMGDDSWRNIQCFPVLPLYWFHRDKSQGVYLSGTINWLALRNYFYSDYEF 248
Query: 56 ENLG---IDMYTIVSFDLGKEELIQLPLP 81
+N+ ++ Y IVS DL E QL LP
Sbjct: 249 DNVSKITVEQYVIVSLDLSTESYTQLLLP 277
>Medtr7g078040.1 | F-box and associated interaction domain protein |
LC | chr7:29477356-29476052 | 20130731
Length = 434
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 8 VNVYNMGDRRWRRIQVSPFPSLHLERGV-----AVYVSNTLNWLATIPA-DIMQENLGID 61
V + + GD WR IQ P +H G AVY+S+TLNWLA D +NL ++
Sbjct: 207 VRILSFGDNVWREIQSFPVVPIHSYFGENDVHNAVYLSSTLNWLAIHNDFDYDIKNLRVE 266
Query: 62 MYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVLRG 102
+ IVS DLG E Q L PR E PI+ VL G
Sbjct: 267 QFVIVSLDLGTETYNQYRL---PRDFDEMPSALPIVAVLGG 304
>Medtr7g061100.1 | F-box and associated interaction domain protein |
LC | chr7:22087734-22088941 | 20130731
Length = 323
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 4 EKTMVNVYNMGDRRWRRIQVSPFPSLHLERGVAVYVSNTLNWLAT---IPADIMQENLGI 60
E T V V+++G WR IQ SP + HL R VYV ++NWLA I D + + I
Sbjct: 145 ETTNVRVFSLGVNVWRNIQDSPM-THHLRRWKVVYVRGSVNWLAIHNYIGDDYNCKGITI 203
Query: 61 DMYTIVSFDLGKEELIQLPL 80
+ + I+S DLG E +L L
Sbjct: 204 EQFVIISLDLGTEAHTKLLL 223
>Medtr2g047200.1 | F-box protein interaction domain protein | LC |
chr2:20700420-20699233 | 20130731
Length = 395
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 3 FEKTMVNVYNMGDRR-WRRIQVSPF-PSLHLERGVAVYVSNTLNWLA----TIPADIMQE 56
F + V V+ +G+ WR Q P P L + V VYVSN+L WLA A E
Sbjct: 188 FRPSDVRVFTLGENNVWRNFQSFPMIPYLSISLNVGVYVSNSLVWLALRNKVYYAYDQWE 247
Query: 57 NLG--IDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
NL ID + I+S DLG E Q+ LP PR E F PI+ VL
Sbjct: 248 NLKTTIDQFVIISLDLGTETYTQM-LP--PRDFDEVPLFMPIVSVL 290
>Medtr4g129160.1 | F-box protein interaction domain protein | LC |
chr4:53773898-53775094 | 20130731
Length = 362
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 7 MVNVYNMGDRRWRRIQVSPFP-SLHLE------RGVAVYVSNTLNWLATIPADIMQENLG 59
+V V+ +GD WR IQ S FP L L + VY+SN+++WL Q+NL
Sbjct: 202 VVKVFTLGDSIWRDIQ-SSFPVELALRSRWDDIKYDGVYLSNSISWLVCHRYKCQQKNLT 260
Query: 60 IDMYTIVSFDLGKEELIQLPLPYSP 84
+ + I+S DL E QL LP P
Sbjct: 261 TEQFVIISLDLETETYTQLQLPKLP 285
>Medtr7g445890.1 | F-box protein interaction domain protein | LC |
chr7:15572893-15571655 | 20130731
Length = 384
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 6 TMVNVYNMGDRRWRRIQVSPFPSLHLERGV----AVYVSNTLNWLATIPADIMQENLGID 61
++V V+ +GD WR I P SLH VY++N+ NW A +NL I+
Sbjct: 168 SVVRVFTLGDNVWRDIDCFPGVSLHHSLSFFAEDGVYLNNSTNWFARQRYYCHLKNLTIE 227
Query: 62 MYTIVSFDLGKEELIQLPLP 81
+ I+S DLG E Q LP
Sbjct: 228 QFVIISLDLGTETYRQSMLP 247
>Medtr2g047892.1 | F-box protein interaction domain protein | LC |
chr2:20974648-20975844 | 20130731
Length = 398
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 3 FEKTMVNVYNMGDRRWRRIQ---VSPFPSLHLERGVAVYVSNTLNWLATIPADIMQEN-- 57
F V V+ +G+ WR IQ V P+ H VY+SN++NW A EN
Sbjct: 187 FRPNEVKVFTLGENIWRNIQSFPVDPYYCTHNPYNCGVYLSNSINWFAVRN----HENFV 242
Query: 58 --------LGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
+ +D + I+S DLG E QL L P+ + E Y P + +L
Sbjct: 243 YGRWKDLIVSVDEFVIISLDLGMETYTQLRL---PQALNEVPYVMPTVSIL 290
>Medtr7g061050.1 | F-box protein interaction domain protein | LC |
chr7:22062774-22063931 | 20130731
Length = 385
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 4 EKTMVNVYNMGDRRWRRIQVSPFPSLHLERGVAVYVSNTLNWLAT---IPADIMQENLGI 60
+ T V V+++G WR IQ SP H + V V+V +++NWLA I D E + I
Sbjct: 181 KTTNVRVFSLGVNVWRNIQDSPMIHHHWQMKV-VHVKDSVNWLAIHNYISDDYNCEGITI 239
Query: 61 DMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
+ I+S DLG E +L + P E + P L VL
Sbjct: 240 GQFVIISLDLGTEAYTKL---FPPHGFSEVPFVIPKLSVL 276
>Medtr1g088120.1 | F-box protein interaction domain protein | LC |
chr1:39380080-39378544 | 20130731
Length = 412
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Query: 6 TMVNVYNMGDRRWRRIQVSPFPSLHLE----RGVAVYVSNTLNWLA-------TIPADIM 54
T V V+++GD WR I+ P L+ + V+++ TLNWLA T D+
Sbjct: 188 TDVRVFSLGDNVWRNIESFPVVPLYCDVEQFHHTGVFLNGTLNWLAIQDEDPITHYCDLE 247
Query: 55 QENLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
N+ ++ IVS DLG E Q LP+ E EP GVL
Sbjct: 248 WNNIKVEQIVIVSLDLGTETYNQYRLPWG---FDEVPSAEPSFGVL 290
>Medtr2g047895.1 | F-box protein interaction domain protein | LC |
chr2:20979916-20981563 | 20130731
Length = 341
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 3 FEKTMVNVYNMGDRRWRRIQVSPFPSLHL--------ERGVAVYVSNTLNWLATIPADIM 54
F V V+ +GD+ WR IQ P +R VY+ N+LNW A ++
Sbjct: 109 FSSVEVRVFTLGDKFWRIIQRFPLLPFRCTRTNTNEWDRNGGVYLCNSLNWFAIRSNNVG 168
Query: 55 QE-----NLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
NL I+ + I S DLG + QL LP PR E PI+ VL
Sbjct: 169 YNEWKDLNLSIEQFVITSLDLGTDSYTQL-LP--PRGFDEVPPVMPIVSVL 216
>Medtr7g056173.1 | F-box protein interaction domain protein | LC |
chr7:19605163-19603928 | 20130731
Length = 328
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 2 LFEKTM-VNVYNMGDRRWRRIQVSPFPSL--------HLERGVAVYVSNTLNWLA----- 47
LF K V ++N+ D WR IQ P SL H+ VYVS TLNWL
Sbjct: 43 LFPKAREVRIFNLSDGVWRIIQRFPLVSLNTSVFRYTHMAINNGVYVSGTLNWLVIQNTG 102
Query: 48 -TIPADIMQENLGIDMYTIVSFDLGKEELIQLPLP 81
P D E + +D + I+S DL E QL LP
Sbjct: 103 NESPYDYFGERITVDNFVIISLDLSTETYRQLRLP 137
>Medtr3g024130.1 | F-box protein interaction domain protein | LC |
chr3:7432795-7431836 | 20130731
Length = 319
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 2 LFEKTMVNVYNMGDRRWRRIQVSPFPSLHLERGVAVYVSNTLNWLATIPADIMQENLGID 61
L KT V V+ +G W+ I PF + +ER +VS T+NWL +I + +E+
Sbjct: 133 LVNKTKVKVHTLGTNYWKIIPEFPFGGVPIER-TGKFVSGTINWLTSI--EFYRES---- 185
Query: 62 MYTIVSFDLGKEELIQLPLP 81
Y IVS+DLGKE ++ LP
Sbjct: 186 PYFIVSYDLGKESYQEVLLP 205
>Medtr4g020000.1 | F-box protein interaction domain protein | LC |
chr4:6389728-6393972 | 20130731
Length = 358
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 5 KTMVNVYNMGDRRWRRIQVSPFPSLHLERGVAVYVSNTLNWLATIP---ADIMQENLGID 61
K++VN+++MGD WR IQ P P + VYV+ T+NWLA D + N+ ++
Sbjct: 141 KSVVNIFSMGDNSWRNIQCFPVPPIASLDNNGVYVTGTINWLAFHDYRCLDGLCWNITVE 200
Query: 62 MYTIVSF 68
Y I+S
Sbjct: 201 QYVILSL 207
>Medtr0242s0060.1 | F-box protein interaction domain protein | HC |
scaffold0242:23586-22283 | 20130731
Length = 419
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 3 FEKTMVNVYNMGDRRWRRIQVSPFPSLHLERGV-----AVYVSNTLNWLATIPA-DIMQE 56
+ +V ++++G W+ IQ P +H G AVY+S+TLNWLA D +
Sbjct: 189 YNPNIVRIWSVGHYGWKDIQSFPVVPVHSYFGENDVHNAVYLSSTLNWLAVHNDFDYDIK 248
Query: 57 NLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVLRG 102
NL ++ + IVS DL E Q L PR +E PI+ VL G
Sbjct: 249 NLKVEQFVIVSLDLRTETYNQYRL---PRDFHEMPSALPIVAVLGG 291
>Medtr0242s0040.1 | F-box protein interaction domain protein | HC |
scaffold0242:14764-13360 | 20130731
Length = 419
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 3 FEKTMVNVYNMGDRRWRRIQVSPFPSLHLERGV-----AVYVSNTLNWLATIPA-DIMQE 56
+ +V ++++G W+ IQ P +H G AVY+S+TLNWLA D +
Sbjct: 189 YNPNIVRIWSVGHYGWKDIQSFPVVPVHSYFGENDVHNAVYLSSTLNWLAVHNDFDYDIK 248
Query: 57 NLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVLRG 102
NL ++ + IVS DL E Q L PR +E PI+ VL G
Sbjct: 249 NLKVEQFVIVSLDLRTETYNQYRL---PRDFHEMPSALPIVAVLGG 291
>Medtr5g043160.1 | F-box protein interaction domain protein | LC |
chr5:18965972-18964593 | 20130731
Length = 459
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 5 KTMVNVYNMGDRRWRRIQVSPFPSLHLERGV-----AVYVSNTLNWLATIPADIMQENLG 59
+ V V+ +G W+ IQ P ++ + + +VY+SN+L+WL + Q+ L
Sbjct: 246 RNTVKVFTLGVNIWKDIQSFPVETVFHPKSMLVDYNSVYLSNSLSWLVRHRYNCHQKILS 305
Query: 60 IDMYTIVSFDLGKEELIQLPLP 81
I+ + I+S DLG E QL LP
Sbjct: 306 IEQFVIISLDLGMETFTQLLLP 327
>Medtr1g055375.1 | F-box protein interaction domain protein | LC |
chr1:24512228-24513331 | 20130731
Length = 367
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 12/71 (16%)
Query: 5 KTMVNVYNMGDRRWRRIQVSPFPSLHLERGVAVYVSNTLNWLAT--IPADIMQENLGIDM 62
KT VNVY +G WRRIQ FPS+ + VS T+NW A+ +P ++ +
Sbjct: 180 KTHVNVYTLGIPSWRRIQ--DFPSMTPNGKSGIIVSGTVNWFASSNVPGNLSR------- 230
Query: 63 YTIVSFDLGKE 73
IVS DLGKE
Sbjct: 231 -AIVSLDLGKE 240
>Medtr5g058620.1 | F-box protein interaction domain protein | LC |
chr5:24331480-24330629 | 20130731
Length = 283
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 8 VNVYNMGDRRWRRIQVSP-----FPSLHLERGVAVYVSNTLNWLAT---IPADIMQENLG 59
V V NMGD WR I+ P + S++ VY+S LNWLA I D ++
Sbjct: 62 VRVINMGDDVWRNIESFPVIPFCYDSVYYGAYKYVYLSGALNWLAIHNFICYDC--NDIT 119
Query: 60 IDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVLRG 102
+D + IVS DL E Q +P+ E EP +GVLRG
Sbjct: 120 VDQFVIVSLDLETETYNQYIMPHG---FDEVPPKEPTIGVLRG 159
>Medtr1g058870.1 | F-box protein interaction domain protein | LC |
chr1:21855964-21855113 | 20130731
Length = 283
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 8 VNVYNMGDRRWRRIQVSP-----FPSLHLERGVAVYVSNTLNWLAT---IPADIMQENLG 59
V V NMGD WR I+ P + S++ VY+S LNWLA I D ++
Sbjct: 62 VRVINMGDDVWRNIESFPVIPFCYDSVYYGAYKYVYLSGALNWLAIHNFICYDC--NDIT 119
Query: 60 IDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVLRG 102
+D + IVS DL E Q +P+ E EP +GVLRG
Sbjct: 120 VDQFVIVSLDLETETYNQYIMPHG---FDEVPPKEPTIGVLRG 159
>Medtr0097s0030.1 | F-box and associated interaction domain protein
| LC | scaffold0097:17310-16141 | 20130731
Length = 389
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 3 FEKTMVNVYNMGDRRWRRIQVSP-FPS--LHLERGVAVYVSNTLNWLATIPADIMQENLG 59
F V V+ +GD WR IQ P +PS ++ VY +N+LNW A +L
Sbjct: 178 FRTNEVRVFTLGDNVWRNIQCFPSYPSHWWYVGWNCGVYFNNSLNWFAYQNNVCWNHHLQ 237
Query: 60 -IDMYTIVSFDLGKEELIQLPLP 81
I+ + I+S DLG E Q+ LP
Sbjct: 238 FIEQFVIISLDLGMETYTQMLLP 260
>Medtr2g047240.1 | F-box and associated interaction domain protein |
LC | chr2:20713471-20712302 | 20130731
Length = 389
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 3 FEKTMVNVYNMGDRRWRRIQVSP-FPS--LHLERGVAVYVSNTLNWLATIPADIMQENLG 59
F V V+ +GD WR IQ P +PS ++ VY +N+LNW A +L
Sbjct: 178 FRTNEVRVFTLGDNVWRNIQCFPSYPSHWWYVGWNCGVYFNNSLNWFAYQNNVCWNHHLQ 237
Query: 60 -IDMYTIVSFDLGKEELIQLPLP 81
I+ + I+S DLG E Q+ LP
Sbjct: 238 FIEQFVIISLDLGMETYTQMLLP 260
>Medtr7g061090.1 | F-box protein interaction domain protein | LC |
chr7:22079928-22081151 | 20130731
Length = 407
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 4 EKTMVNVYNMGDRRWRRIQVSPFPSLHLE---RGVAVYVSNTLNWLAT---IPADIMQEN 57
+ T V V+++G+ WR IQ SP H + V++S+++NWLA I D ++
Sbjct: 201 KTTNVRVFSLGNNVWRDIQNSPVVHHHHHQYRKMSVVHLSSSVNWLAIHNYIRDDYYCKD 260
Query: 58 LGIDMYTIVSFDLGKEELIQLPLPYS 83
+ I+ + I+S DLG E + P+S
Sbjct: 261 IAIEQFMIISLDLGTETHAKFRPPHS 286
>Medtr7g066840.1 | F-box protein interaction domain protein | LC |
chr7:24384288-24385493 | 20130731
Length = 401
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 8 VNVYNMGDRRWRRIQ------VSPFPSLHLERGVAVYVSNTLNWLA---TIPADIMQENL 58
V V+++GD WR IQ ++P H GV VY S+TLNWL I D L
Sbjct: 190 VKVFSLGDDIWRSIQSFPEFCLTPSDLQHYIDGVGVYFSSTLNWLVIRNDITYDKDSNYL 249
Query: 59 GIDMYTIVSFDLGKEELIQLPLP 81
Y I+S +LG E+ QL P
Sbjct: 250 NFKNYMIISLNLGTEKYTQLLPP 272
>Medtr4g013175.1 | F-box protein interaction domain protein | LC |
chr4:3556771-3558757 | 20130731
Length = 427
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 20/108 (18%)
Query: 8 VNVYNMGDRRWRRIQVSPFPSLHLE------RGVAVYVSNTLNWLATIPADI-------- 53
V V+++GD WR I+ FP +HL V++++T NWLA I DI
Sbjct: 202 VRVFSLGDNVWRNIE--SFPVVHLNLYYEGFEHTDVFLNSTFNWLA-IYNDIPITWYWFP 258
Query: 54 MQENLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVLR 101
E++ ++ IVS DLG E Q L PR E EP +GVLR
Sbjct: 259 DLEDITVEQIVIVSLDLGTESYNQYRL---PRGFDEMPTEEPTVGVLR 303
>Medtr7g056003.1 | F-box protein interaction domain protein | LC |
chr7:19357009-19358238 | 20130731
Length = 409
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 3 FEKTMVNVYNMGDRRWRRIQVSPF-----PSLHLE----RGVAVYVSNTLNWLA--TIPA 51
F VN+++M D WR I P S HLE VYV T+NWLA +
Sbjct: 182 FSANKVNIFSMSDNAWRDIPTFPIVPFGVESEHLECHPFLNCGVYVRGTINWLAIRNMTD 241
Query: 52 DIMQENLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
++ ID + IVS DL E QL LP P E +P + VL
Sbjct: 242 QYEWRDITIDQFVIVSLDLATETYRQL-LP--PSGFVEVPPIQPFVTVL 287
>Medtr7g062060.1 | F-box protein interaction domain protein | LC |
chr7:22521265-22520060 | 20130731
Length = 401
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 10 VYNMGDRRWRRIQ---VSPFPSLHLERGVAVYVSNTLNWLATI--PADIMQENLGIDMYT 64
V+++GD WR I P + + VY+ TLNWLA P D ++ Y
Sbjct: 211 VFSLGDNIWRNITNLPAVPLQVFNFRQHYVVYLKGTLNWLAVFDFPID------SVNKYV 264
Query: 65 IVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVLRG 102
I+S DLG E Q+ LP ++ Q F P +GVL G
Sbjct: 265 IISLDLGTERYTQMRLPQGFDKLP--QVF-PTIGVLNG 299
>Medtr7g077990.1 | F-box and associated interaction domain protein |
LC | chr7:29455116-29452824 | 20130731
Length = 399
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 5 KTMVNVYNMGDRRWRRIQVSPFPSLHLER--------GVAVYVSNTLNWLATIP-ADIMQ 55
++ V + ++ D WR I+ P LHL+ VY+S+TLNWLA
Sbjct: 180 RSNVKILSLHDNVWRDIESFPVAPLHLDDTELHDRRVNCGVYLSSTLNWLAIHNHLHYNS 239
Query: 56 ENLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVLRG 102
+N+ ++ + I+S DLG E + L PR E P +GVL G
Sbjct: 240 KNITVEQFVIISLDLGTETYNKYQL---PRDFDEVPPEAPTVGVLGG 283
>Medtr4g030830.1 | F-box protein interaction domain protein | LC |
chr4:10481298-10482485 | 20130731
Length = 395
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 23/110 (20%)
Query: 5 KTMVNVYNMGDRRWRRIQVSPFPSLHL--ERGVAVYVSNTLNWLATIPADIMQENLGIDM 62
+++V V++M D WR IQ P L++ VY S+T+NWLA +Q+ G+D
Sbjct: 181 RSVVKVFSMRDNCWRNIQCFPVLPLYMFVSTQNGVYFSSTVNWLA------LQDYFGLDY 234
Query: 63 ------------YTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
Y I+S DL E QL LP ++ Q P L VL
Sbjct: 235 FHLNYSSITPEKYVILSLDLSTETYTQLLLPRGFNKVSRHQ---PKLAVL 281
>Medtr7g056503.1 | F-box protein interaction domain protein | LC |
chr7:20059040-20057841 | 20130731
Length = 399
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 8 VNVYNMGDRRWRRIQVSPFPSLHL-----ERGVAVYVSNTLNWLATIPADIMQENLGIDM 62
V V+++ D WR I+ P L L VY+S T+NWLA +D
Sbjct: 201 VKVFSLADNLWRNIENFPAIPLQLLNVGQRVQNGVYLSGTVNWLAVFDNPFY----SVDK 256
Query: 63 YTIVSFDLGKEELIQLPLPYSPR---RIYEFQYFEPILGVLRG 102
Y I+S DLG E Q+ LP R+Y P +GVL+G
Sbjct: 257 YVIISLDLGTETYTQMRLPQGFDDLPRVY------PTIGVLKG 293
>Medtr3g464470.1 | F-box protein interaction domain protein | LC |
chr3:25902199-25901054 | 20130731
Length = 381
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 6 TMVNVYNMGDRRWRRIQVSPFPSLHL---ERGVAVYVSNTLNWLAT---IPADIMQENLG 59
++V V +M D WR IQ P L+ ++ VY+S T+NWLA +D +N+
Sbjct: 170 SVVKVLSMEDDSWRNIQCFPVLPLYWFDHDKNQGVYLSGTINWLALHNYFYSDYEFDNVS 229
Query: 60 ---IDMYTIVSFDLGKEELIQLPLP 81
++ Y IVS DL E QL LP
Sbjct: 230 KITVEQYVIVSLDLSTESYTQLLLP 254
>Medtr4g030980.1 | F-box protein interaction domain protein | LC |
chr4:10554610-10553321 | 20130731
Length = 429
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 6 TMVNVYNMGDRRWRRIQVSPFPSLHL---ERGVAVYVSNTLNWLATIPADIMQE------ 56
++V V+NM D WR IQ P L+ E+ VY++ T+NWL T+ +
Sbjct: 218 SVVKVFNMADNSWRNIQCFPVLPLYWFKREKNNGVYLNGTINWL-TLRDYFYSDYEIGNV 276
Query: 57 -NLGIDMYTIVSFDLGKEELIQLPLP 81
N+ + Y IVS DL E +L LP
Sbjct: 277 SNISVAQYGIVSLDLSTESYTELLLP 302
>Medtr3g030320.1 | F-box protein interaction domain protein | LC |
chr3:9588632-9586952 | 20130731
Length = 301
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 8 VNVYNMGDRRWRRIQVSPFPSLHLERGVAVYVSNTLNWLATIPADIMQENLGIDMYTIVS 67
V+VY +G WRRIQ FP H+ V+VS T+NWL+ DI L IVS
Sbjct: 115 VSVYTLGTNTWRRIQ--DFPYSHISDNPGVFVSGTINWLS---YDISSRLLN----AIVS 165
Query: 68 FDLGKEELIQLPLPYSPRR 86
DL E L LP + ++
Sbjct: 166 LDLENESYQNLLLPDTDKQ 184
>Medtr5g046280.1 | F-box protein interaction domain protein | LC |
chr5:20300945-20301709 | 20130731
Length = 254
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 4 EKTMVNVYNMGDRRWRRIQVSPFPSLHLERGVAVYVSNTLNWLATIPADIMQENLGIDMY 63
EK ++V+ +G WRRIQ PF S H+ G ++V +T+NWLA D N G ++
Sbjct: 70 EKNEISVHTLGTEYWRRIQDFPF-SGHI-GGPGIFVKDTVNWLAFENVD----NNG--LF 121
Query: 64 TIVSFDLGKE--ELIQLP 79
IVS DL E E+I +P
Sbjct: 122 AIVSLDLETESYEIISIP 139
>Medtr5g011200.1 | F-box protein interaction domain protein | HC |
chr5:3180777-3183076 | 20130731
Length = 375
Score = 45.8 bits (107), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 5 KTMVNVYNMGDRRWRRIQVSPFPSLHLERG-VAVYVSNTLNWLATIPADIMQENLGIDMY 63
KT V+VY +G WRRI+ FPSL + ++VS T+NWLA D +LG
Sbjct: 187 KTEVSVYTLGTDYWRRIE--DFPSLMIPYSQQGIFVSGTVNWLADYDLD-DNNSLG---- 239
Query: 64 TIVSFDLGKEELIQLPLP 81
TIVS DL KE ++ P
Sbjct: 240 TIVSLDLRKEIYQEISQP 257
>Medtr7g070440.1 | F-box protein interaction domain protein | LC |
chr7:26003951-26002830 | 20130731
Length = 373
Score = 45.8 bits (107), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 8 VNVYNMGDRRWRRIQVSPFPSLH-LERGVAVYVSNTLNWLATIPADIMQENLGIDMYTIV 66
VNVYN WR IQ FP + + R +Y++ T+NWLAT D N +Y IV
Sbjct: 180 VNVYNKRYNCWRNIQ--NFPGYNPVTRNPGMYLNGTINWLATSKLDWEWNN---TLY-IV 233
Query: 67 SFDLGKEELIQLPLPYSPRRIYEFQY--FEPILGVLR 101
S DLG E +L LP + + + + +P LG+L+
Sbjct: 234 SLDLGNETHKKLSLPSCFDQAHRYGHCRAKPSLGILK 270