Miyakogusa Predicted Gene

Lj5g3v1872920.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1872920.1 Non Characterized Hit- tr|G4LZT5|G4LZT5_SCHMA
Receptor tyrosine phosphatase type r2a,putative
OS=Sch,28.29,0.00000000000001,TYR_PHOSPHATASE_PTP,Protein-tyrosine
phosphatase, receptor/non-receptor type;
TYR_PHOSPHATASE_2,Prot,CUFF.56249.1
         (336 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g096990.1 | tyrosine phosphatase | HC | chr1:43722991-4371...   531   e-151
Medtr1g096990.2 | tyrosine phosphatase | HC | chr1:43722991-4372...   489   e-138

>Medtr1g096990.1 | tyrosine phosphatase | HC |
           chr1:43722991-43718194 | 20130731
          Length = 331

 Score =  531 bits (1367), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 251/320 (78%), Positives = 276/320 (86%), Gaps = 1/320 (0%)

Query: 16  HEILNFSPDSPTPISLTPDQLKHCTQALSLFKQKLLNPHTISQEFAYLQTNRFTPSQMKR 75
           H+   FSPD P+ I LT DQ+ HCT+AL+L K KL NP TI QEF +LQ NR T S+  R
Sbjct: 13  HQNPTFSPDFPSRIPLTSDQVNHCTKALALLKNKLRNPDTILQEFLHLQANRITLSESTR 72

Query: 76  SCNVALDPVNSSKNRYTDVIPFDKNRVVLKSSTDYRPAALGYINASFVSTSSPGVVASQF 135
            CNVAL+ VN +KNRY DVIPFDKNRVVL SS+DYR  +LGYINASF+ TSS G V S+F
Sbjct: 73  RCNVALNSVNINKNRYKDVIPFDKNRVVLNSSSDYRSESLGYINASFILTSSTGTV-SEF 131

Query: 136 IATQGPLPHTYEDLWEMVIQYHCPAIVMLTRLVDNYKMVKCGDYFQSEDGPREFGNISVN 195
           IATQGPLPHTYED WEM++QY+CPAIVMLT+LVDNYKMVKCGDYFQSED PREFGNIS+ 
Sbjct: 132 IATQGPLPHTYEDFWEMIMQYNCPAIVMLTKLVDNYKMVKCGDYFQSEDRPREFGNISLA 191

Query: 196 CKWAKTTEASLVLRHLEVNRSEGEGAPLSVLHIQYPEWPDHGVPKDTSAVREILKRLYHL 255
           CKW KTTE SLVLRHLEVN  E E  PLSV HIQYPEWPDHGVP DT AVREILKRLYHL
Sbjct: 192 CKWTKTTETSLVLRHLEVNHKEVEDTPLSVFHIQYPEWPDHGVPNDTLAVREILKRLYHL 251

Query: 256 PPNLGPIVVHCSAGIGRTGTYCTIHNAIQRILAGDMSAVDIANTVAMFRSQRIGMVQTQE 315
           PPNLGPIVVHCSAGIGRTGTYCTIH+ IQRILAGD+SA+DIANTV++FRSQRIGMVQTQ+
Sbjct: 252 PPNLGPIVVHCSAGIGRTGTYCTIHSTIQRILAGDISAIDIANTVSVFRSQRIGMVQTQD 311

Query: 316 QYIFCYEAIMDELEDLVSQQ 335
           QYIFCYEAI+DELEDLVSQQ
Sbjct: 312 QYIFCYEAIIDELEDLVSQQ 331


>Medtr1g096990.2 | tyrosine phosphatase | HC |
           chr1:43722991-43720183 | 20130731
          Length = 321

 Score =  489 bits (1258), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 232/299 (77%), Positives = 255/299 (85%), Gaps = 1/299 (0%)

Query: 16  HEILNFSPDSPTPISLTPDQLKHCTQALSLFKQKLLNPHTISQEFAYLQTNRFTPSQMKR 75
           H+   FSPD P+ I LT DQ+ HCT+AL+L K KL NP TI QEF +LQ NR T S+  R
Sbjct: 13  HQNPTFSPDFPSRIPLTSDQVNHCTKALALLKNKLRNPDTILQEFLHLQANRITLSESTR 72

Query: 76  SCNVALDPVNSSKNRYTDVIPFDKNRVVLKSSTDYRPAALGYINASFVSTSSPGVVASQF 135
            CNVAL+ VN +KNRY DVIPFDKNRVVL SS+DYR  +LGYINASF+ TSS G V S+F
Sbjct: 73  RCNVALNSVNINKNRYKDVIPFDKNRVVLNSSSDYRSESLGYINASFILTSSTGTV-SEF 131

Query: 136 IATQGPLPHTYEDLWEMVIQYHCPAIVMLTRLVDNYKMVKCGDYFQSEDGPREFGNISVN 195
           IATQGPLPHTYED WEM++QY+CPAIVMLT+LVDNYKMVKCGDYFQSED PREFGNIS+ 
Sbjct: 132 IATQGPLPHTYEDFWEMIMQYNCPAIVMLTKLVDNYKMVKCGDYFQSEDRPREFGNISLA 191

Query: 196 CKWAKTTEASLVLRHLEVNRSEGEGAPLSVLHIQYPEWPDHGVPKDTSAVREILKRLYHL 255
           CKW KTTE SLVLRHLEVN  E E  PLSV HIQYPEWPDHGVP DT AVREILKRLYHL
Sbjct: 192 CKWTKTTETSLVLRHLEVNHKEVEDTPLSVFHIQYPEWPDHGVPNDTLAVREILKRLYHL 251

Query: 256 PPNLGPIVVHCSAGIGRTGTYCTIHNAIQRILAGDMSAVDIANTVAMFRSQRIGMVQTQ 314
           PPNLGPIVVHCSAGIGRTGTYCTIH+ IQRILAGD+SA+DIANTV++FRSQRIGMVQTQ
Sbjct: 252 PPNLGPIVVHCSAGIGRTGTYCTIHSTIQRILAGDISAIDIANTVSVFRSQRIGMVQTQ 310