Miyakogusa Predicted Gene

Lj5g3v1871880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1871880.1 Non Characterized Hit- tr|B9S9Q5|B9S9Q5_RICCO 30S
ribosomal protein S10, putative OS=Ricinus communi,100,2e-32,Ribosomal
protein S10,Ribosomal protein S10; RIBOSOMALS10,Ribosomal protein S10;
no description,Ribo,NODE_21703_length_544_cov_773.376831.path2.1
         (66 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g058430.1 | 30S ribosomal protein S10 | HC | chr3:23188302...   129   5e-31

>Medtr3g058430.1 | 30S ribosomal protein S10 | HC |
           chr3:23188302-23185134 | 20130731
          Length = 188

 Score =  129 bits (324), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 60/66 (90%), Positives = 64/66 (96%)

Query: 1   MGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGV 60
           MGPVPLPTKKRI+CVLKSPHVHKDARFHFE+RTHQR+IDIL+PTAQTIDSLM L LPAGV
Sbjct: 123 MGPVPLPTKKRIHCVLKSPHVHKDARFHFEVRTHQRVIDILFPTAQTIDSLMLLQLPAGV 182

Query: 61  DVEVKL 66
           DVEVKL
Sbjct: 183 DVEVKL 188