Miyakogusa Predicted Gene

Lj5g3v1871860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1871860.1 Non Characterized Hit- tr|K3YGL1|K3YGL1_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si013379,46.74,3e-19,Agenet,Agenet-like domain,CUFF.56245.1
         (121 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g058500.1 | bromo adjacent-like domain protein | HC | chr3...   191   2e-49
Medtr2g026390.1 | bromo adjacent-like domain protein | HC | chr2...   108   8e-25
Medtr5g055210.1 | bromo adjacent-like domain protein | HC | chr5...    90   6e-19
Medtr5g055210.4 | bromo adjacent-like domain protein | HC | chr5...    89   7e-19
Medtr5g055210.5 | bromo adjacent-like domain protein | HC | chr5...    89   7e-19
Medtr5g055210.3 | bromo adjacent-like domain protein | HC | chr5...    89   7e-19
Medtr5g055210.2 | bromo adjacent-like domain protein | HC | chr5...    89   7e-19
Medtr3g462210.1 | hypothetical protein | LC | chr3:24830480-2482...    46   8e-06

>Medtr3g058500.1 | bromo adjacent-like domain protein | HC |
           chr3:23246301-23250734 | 20130731
          Length = 662

 Score =  191 bits (484), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 89/114 (78%), Positives = 100/114 (87%)

Query: 1   MLSLKQIEFQPWNNPTYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKFQYDDVQDED 60
           +LSLK+++ +PW NPTYKVDDKIE+L QDSGIRGCWFRCT+VQVARKQLK QYDDVQDED
Sbjct: 368 LLSLKKVDCKPWFNPTYKVDDKIEVLSQDSGIRGCWFRCTIVQVARKQLKVQYDDVQDED 427

Query: 61  GSGNLQEWVPAFKFAKPDKLGMRHSDRPTIRLAPIHEEQKLAIEVGTAVDAWWS 114
           GSGNL+EW+PAFK AKPDKL MR   R TIR AP  EEQ+L +EVGTAVDAWWS
Sbjct: 428 GSGNLEEWIPAFKLAKPDKLEMRQPGRSTIRPAPPLEEQELIVEVGTAVDAWWS 481


>Medtr2g026390.1 | bromo adjacent-like domain protein | HC |
           chr2:9533653-9528320 | 20130731
          Length = 700

 Score =  108 bits (271), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 51/97 (52%), Positives = 66/97 (68%), Gaps = 1/97 (1%)

Query: 17  YKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKFQYDDVQDE-DGSGNLQEWVPAFKFA 75
           +KV+DK+E L QDSGIRGCWFRCT++  + K+LK  YDD+ D  D   +L+EW+PA + A
Sbjct: 388 FKVNDKVEFLSQDSGIRGCWFRCTILYASHKKLKVLYDDIMDAVDEEEHLEEWIPAQRVA 447

Query: 76  KPDKLGMRHSDRPTIRLAPIHEEQKLAIEVGTAVDAW 112
           KPDKLGMR   R  +R  P    +    E+G AVDAW
Sbjct: 448 KPDKLGMRCDGRFLVRPRPPESVKGCTFEIGAAVDAW 484


>Medtr5g055210.1 | bromo adjacent-like domain protein | HC |
           chr5:22745712-22741441 | 20130731
          Length = 685

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 5/98 (5%)

Query: 19  VDDKIELLCQDSGIRGCWFRCTVVQVARKQLKFQYDDVQD-EDGSGNLQEWVPAFKFAKP 77
           V   +E+L QDSGIRGCWFR +V++  + ++K QY D+QD ED + NL+EW+ A +   P
Sbjct: 390 VGSNVEVLSQDSGIRGCWFRASVIKRHKDKVKVQYHDIQDAEDEANNLEEWILASRPVVP 449

Query: 78  DKLGMRHSDRPTIRLAPIHEEQKLAI--EVGTAVDAWW 113
           D LG+R  +R  IR  P+ E++ ++   +VG  VDAWW
Sbjct: 450 DDLGLRVEERTKIR--PLLEKRGISFVGDVGYIVDAWW 485


>Medtr5g055210.4 | bromo adjacent-like domain protein | HC |
           chr5:22745706-22741441 | 20130731
          Length = 502

 Score = 89.4 bits (220), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 5/98 (5%)

Query: 19  VDDKIELLCQDSGIRGCWFRCTVVQVARKQLKFQYDDVQD-EDGSGNLQEWVPAFKFAKP 77
           V   +E+L QDSGIRGCWFR +V++  + ++K QY D+QD ED + NL+EW+ A +   P
Sbjct: 207 VGSNVEVLSQDSGIRGCWFRASVIKRHKDKVKVQYHDIQDAEDEANNLEEWILASRPVVP 266

Query: 78  DKLGMRHSDRPTIRLAPIHEEQKLAI--EVGTAVDAWW 113
           D LG+R  +R  IR  P+ E++ ++   +VG  VDAWW
Sbjct: 267 DDLGLRVEERTKIR--PLLEKRGISFVGDVGYIVDAWW 302


>Medtr5g055210.5 | bromo adjacent-like domain protein | HC |
           chr5:22744621-22741499 | 20130731
          Length = 502

 Score = 89.4 bits (220), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 5/98 (5%)

Query: 19  VDDKIELLCQDSGIRGCWFRCTVVQVARKQLKFQYDDVQD-EDGSGNLQEWVPAFKFAKP 77
           V   +E+L QDSGIRGCWFR +V++  + ++K QY D+QD ED + NL+EW+ A +   P
Sbjct: 207 VGSNVEVLSQDSGIRGCWFRASVIKRHKDKVKVQYHDIQDAEDEANNLEEWILASRPVVP 266

Query: 78  DKLGMRHSDRPTIRLAPIHEEQKLAI--EVGTAVDAWW 113
           D LG+R  +R  IR  P+ E++ ++   +VG  VDAWW
Sbjct: 267 DDLGLRVEERTKIR--PLLEKRGISFVGDVGYIVDAWW 302


>Medtr5g055210.3 | bromo adjacent-like domain protein | HC |
           chr5:22745706-22741499 | 20130731
          Length = 502

 Score = 89.4 bits (220), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 5/98 (5%)

Query: 19  VDDKIELLCQDSGIRGCWFRCTVVQVARKQLKFQYDDVQD-EDGSGNLQEWVPAFKFAKP 77
           V   +E+L QDSGIRGCWFR +V++  + ++K QY D+QD ED + NL+EW+ A +   P
Sbjct: 207 VGSNVEVLSQDSGIRGCWFRASVIKRHKDKVKVQYHDIQDAEDEANNLEEWILASRPVVP 266

Query: 78  DKLGMRHSDRPTIRLAPIHEEQKLAI--EVGTAVDAWW 113
           D LG+R  +R  IR  P+ E++ ++   +VG  VDAWW
Sbjct: 267 DDLGLRVEERTKIR--PLLEKRGISFVGDVGYIVDAWW 302


>Medtr5g055210.2 | bromo adjacent-like domain protein | HC |
           chr5:22745706-22741499 | 20130731
          Length = 580

 Score = 89.4 bits (220), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 5/98 (5%)

Query: 19  VDDKIELLCQDSGIRGCWFRCTVVQVARKQLKFQYDDVQD-EDGSGNLQEWVPAFKFAKP 77
           V   +E+L QDSGIRGCWFR +V++  + ++K QY D+QD ED + NL+EW+ A +   P
Sbjct: 285 VGSNVEVLSQDSGIRGCWFRASVIKRHKDKVKVQYHDIQDAEDEANNLEEWILASRPVVP 344

Query: 78  DKLGMRHSDRPTIRLAPIHEEQKLAI--EVGTAVDAWW 113
           D LG+R  +R  IR  P+ E++ ++   +VG  VDAWW
Sbjct: 345 DDLGLRVEERTKIR--PLLEKRGISFVGDVGYIVDAWW 380


>Medtr3g462210.1 | hypothetical protein | LC |
          chr3:24830480-24829940 | 20130731
          Length = 83

 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 28/34 (82%), Gaps = 1/34 (2%)

Query: 42 VQVARKQLKFQYDDVQDEDGSGNLQ-EWVPAFKF 74
          +QVARKQLK QYDDVQDED SGNL+ +  P+F+ 
Sbjct: 49 LQVARKQLKVQYDDVQDEDESGNLEVQLNPSFEI 82