Miyakogusa Predicted Gene

Lj5g3v1869800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1869800.1 tr|A9S8A5|A9S8A5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_125705,39.84,6e-18,seg,NULL;
Thioredoxin-like,Thioredoxin-like fold;
Thioredoxin_6,NULL,CUFF.56092.1
         (239 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g096790.1 | protein disulfide isomerase-like protein, puta...   381   e-106

>Medtr1g096790.1 | protein disulfide isomerase-like protein,
           putative | HC | chr1:43610271-43604550 | 20130731
          Length = 430

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/239 (77%), Positives = 211/239 (88%), Gaps = 2/239 (0%)

Query: 1   MVLYDFDKIPALVSLNPQFNERSTFYGPYEENFLEDFVKQNLIPLVVPVSYDTLKLMKAD 60
           MV YDFDKIPALVSLNP +NER+TFYGP+E++FLEDF+KQNLIPL VPVSY+TLKLMKAD
Sbjct: 193 MVTYDFDKIPALVSLNPLYNERNTFYGPFEDDFLEDFIKQNLIPLAVPVSYETLKLMKAD 252

Query: 61  GRKIVLTIVEDENEENSKELIKLLKGAASANRDLIFGYVGVKQMDEFADKFDTSTKLPKM 120
           GRKIVLTIV+DE+EE+SKEL+KLL+ AASANRDLIFGYVGVKQ+DEFADKFDT+TKLPKM
Sbjct: 253 GRKIVLTIVDDESEESSKELVKLLRAAASANRDLIFGYVGVKQLDEFADKFDTTTKLPKM 312

Query: 121 VIWDKSDDYLSVVGSESIEGEDQGTQITKFLEGYREGRTVQKRLSGPSLMQFIHRSFDIR 180
           VIWDK D+YLSVVGSESIE EDQGTQITKFLEGYREGRTV+K  SGPSLMQFIHRSFDIR
Sbjct: 313 VIWDKEDEYLSVVGSESIEAEDQGTQITKFLEGYREGRTVKKSFSGPSLMQFIHRSFDIR 372

Query: 181 MVYMIVFMVAVFILIQTLGGKGGD-EHHRVPNQEQVDHAXXXXXXXXXXXXYKPGDKKE 238
           MVY++VFM+AV +LIQTLG KG D E+ RVPNQ++V+              YK GDK++
Sbjct: 373 MVYIVVFMIAVLMLIQTLGSKGDDGEYQRVPNQDKVNQP-SSSTSEGESKEYKEGDKED 430