Miyakogusa Predicted Gene

Lj5g3v1865690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1865690.1 tr|I0YPV2|I0YPV2_9CHLO Protein CrcB homolog
OS=Coccomyxa subellipsoidea C-169 GN=crcB PE=3
SV=1,27.68,8e-18,CRCB,Camphor resistance CrcB protein; CrbC,Camphor
resistance CrcB protein,gene.g62474.t1.1
         (424 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g072830.1 | camphor resistance CrcB-like protein | HC | ch...   618   e-177
Medtr3g007470.1 | camphor resistance CrcB-like protein | HC | ch...   451   e-127
Medtr3g072840.1 | camphor resistance CrcB-like protein | LC | ch...   435   e-122

>Medtr3g072830.1 | camphor resistance CrcB-like protein | HC |
           chr3:32779600-32776698 | 20130731
          Length = 451

 Score =  618 bits (1593), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 315/437 (72%), Positives = 356/437 (81%), Gaps = 17/437 (3%)

Query: 1   MSSHISHHTDNNDDAESGSVSEAGDIGD---------QSNSFRLSFDNRSENGAVSTLIQ 51
           MSSH SHHTDN  D ES  VSEAGDIGD         QSNSF    +N    G V ++ Q
Sbjct: 19  MSSHRSHHTDNGIDCES--VSEAGDIGDRALPSRRFSQSNSFHS--ENGGGGGGVVSIPQ 74

Query: 52  DGNRLQPNSSVMPL--QIELTSPLSTDAVLISEEGAKDEHNGLPEWLDYISCMALLAVFG 109
           + + L PNSSV PL  Q+  T PLSTDA + S++   +   GLPE+LDY+SC A LAVFG
Sbjct: 75  ELHTLHPNSSVRPLPHQLSSTPPLSTDARVGSQDSKFEPSKGLPEFLDYVSCTAQLAVFG 134

Query: 110 ILGVLTRYLLQKLFGPGVANVTSDQTILYPDLPSNVVGSFLMGWFGVVFKGDISHVSEHL 169
           ILGV+TRYLLQKLFGPGVANVTS+ TILY DLPSN++GSFLMGWFGVV+K DIS+VSEHL
Sbjct: 135 ILGVITRYLLQKLFGPGVANVTSNHTILYLDLPSNMIGSFLMGWFGVVYKKDISNVSEHL 194

Query: 170 AIAITTGYLGSLTTFSGWNQGMLQLSVSGHWVYSSLGFLIGFSLVVISIIFGTESAKGFR 229
           A+AITTGYLGSLTTFSGWNQ ML+LS SGHWV SSLGFLIG +LV +SI FG E+AKGFR
Sbjct: 195 AVAITTGYLGSLTTFSGWNQKMLELSASGHWVISSLGFLIGLALVAVSIAFGIETAKGFR 254

Query: 230 WLLNRLNMCSA-NGSSKINYKVDNYRRQLTLMLMSLVILAILWGVSGALVKAKFKHGGSA 288
            LLNR N+    NG+  IN+KVD+YRRQLT+M++ LVIL +LWGVSGALVKAKFK GGSA
Sbjct: 255 LLLNRQNITKPENGTFMINFKVDSYRRQLTIMMIFLVILGVLWGVSGALVKAKFKRGGSA 314

Query: 289 AQLWIACIVGPFGVWIRWFLARLNGRGLGKAGL-YKWVPFGTLIANVSAACVMAALACVK 347
           A+LW AC+VGP GVWIRWFLARLNG GLGK GL +KW+PFGTLIANVSAAC MAAL+ +K
Sbjct: 315 AELWFACMVGPIGVWIRWFLARLNGHGLGKDGLRFKWIPFGTLIANVSAACAMAALSTIK 374

Query: 348 TAVNTRNCDTVVGGIQFGLMGCLSTVSTFVAEINAMRESRHPWRAYAYAAMTICVSFSLG 407
            AVNTRNCDTVV GIQFG+MGCLSTVSTF AE NAMR+S  PWRAYAYAA+TICVSFS G
Sbjct: 375 NAVNTRNCDTVVAGIQFGVMGCLSTVSTFAAEFNAMRKSSDPWRAYAYAAITICVSFSFG 434

Query: 408 ILIYCIPYWTKGFDNDT 424
           ILIYC+PYWTKGFD DT
Sbjct: 435 ILIYCVPYWTKGFDIDT 451


>Medtr3g007470.1 | camphor resistance CrcB-like protein | HC |
           chr3:1033031-1036474 | 20130731
          Length = 385

 Score =  451 bits (1161), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/361 (65%), Positives = 279/361 (77%), Gaps = 5/361 (1%)

Query: 60  SSVMPLQIELTSPLSTDAVLISE--EGAKDEHNGLPEWLDYISCMALLAVFGILGVLTRY 117
           SS++PL  E  SPL ++    SE  +  ++    LP+ LD  S +  LAVFGILGVLTRY
Sbjct: 21  SSILPLTSEQMSPLLSNEREDSEDIQQLQEPSKELPKLLDNASYLIHLAVFGILGVLTRY 80

Query: 118 LLQKLFGPGVANVTSDQTILYPDLPSNVVGSFLMGWFGVVFKGDISHVSEHLAIAITTGY 177
            L KLFGP V +VTSDQTILY DLPSN+VGSFLMGWFGVVFK DIS+VS++LA+A+TTGY
Sbjct: 81  TLDKLFGPSVGHVTSDQTILYLDLPSNMVGSFLMGWFGVVFKEDISNVSKYLAVALTTGY 140

Query: 178 LGSLTTFSGWNQGMLQLSVSGHWVYSSLGFLIGFSLVVISIIFGTESAKGFRWLLNRLNM 237
           LGSLTTFSGWNQ ML+LSV+G+W++  LGFLIG  LV  SIIFG E+AKGFRWLL RLN+
Sbjct: 141 LGSLTTFSGWNQKMLELSVTGNWLFVVLGFLIGLFLVAFSIIFGIETAKGFRWLLTRLNV 200

Query: 238 CSANGSS--KINYKVDNYRRQLTLMLMSLVILAILWGVSGALVKAKFKHGGSAAQLWIAC 295
            S + +S  K   KV+ ++  L +ML+ L+IL +LWGVSG L+ A+FK+G + A LWIAC
Sbjct: 201 TSGSETSRDKTKAKVEAFKHHLVVMLVFLLILGLLWGVSGVLMIAEFKNGEN-AYLWIAC 259

Query: 296 IVGPFGVWIRWFLARLNGRGLGKAGLYKWVPFGTLIANVSAACVMAALACVKTAVNTRNC 355
           IVGP GVWIRW L+RLNG GLG  GL  W+ FGTL ANVSAAC+MAALA  K  VNTR+C
Sbjct: 260 IVGPLGVWIRWLLSRLNGHGLGSRGLLSWMRFGTLTANVSAACIMAALATTKIYVNTRDC 319

Query: 356 DTVVGGIQFGLMGCLSTVSTFVAEINAMRESRHPWRAYAYAAMTICVSFSLGILIYCIPY 415
           DT+V GIQFGL GCLSTVSTFVAE N MRES HPWRAY Y  +TIC SF LGILIY +P 
Sbjct: 320 DTIVKGIQFGLFGCLSTVSTFVAEFNEMRESEHPWRAYVYTIITICSSFFLGILIYSVPI 379

Query: 416 W 416
           W
Sbjct: 380 W 380


>Medtr3g072840.1 | camphor resistance CrcB-like protein | LC |
           chr3:32784151-32781499 | 20130731
          Length = 444

 Score =  435 bits (1118), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/418 (58%), Positives = 303/418 (72%), Gaps = 16/418 (3%)

Query: 12  NDDAESGSV-SEAGDIGDQ------SNSFRLSFDNRSENGAVSTLIQDGNRLQP--NSSV 62
           +D+AE     S AGDI  Q      S  F LS   + ENG V       + L P  N+ +
Sbjct: 24  DDEAEDHECFSAAGDIAFQGRRKSESGGFDLSLYIKPENGTVVYNPAMEHELPPSNNNYI 83

Query: 63  MPLQIELTSPL--STDAVLISEEGAKD-EHNGLPEWLDYISCMALLAVFGILGVLTRYLL 119
           +  Q  L  P+  ST+  +  E+  +  E + +P+ L+Y+SC+  LAVFGILGVLTRYLL
Sbjct: 84  VNPQEHLDLPIFVSTNGKVNYEDIKQVLELDKIPKLLEYVSCLTHLAVFGILGVLTRYLL 143

Query: 120 QKLFGPGVANVTSDQTILYPDLPSNVVGSFLMGWFGVVFKGDISHVSEHLAIAITTGYLG 179
           QK FGPG   VTSD T+ Y DLPSN++GSFLMGWFG VFK DIS VSEHLAI +TTGYLG
Sbjct: 144 QKSFGPGGFGVTSDHTVFYLDLPSNMIGSFLMGWFGFVFKRDISCVSEHLAIGLTTGYLG 203

Query: 180 SLTTFSGWNQGMLQLSVSGHWVYSSLGFLIGFSLVVISIIFGTESAKGFRWLLNRLNMCS 239
           SLTTFSGWNQ ML+L V+GHW+ S LGFLIG  LV +SII G  +AKGF+WLL RLNM  
Sbjct: 204 SLTTFSGWNQKMLELGVAGHWILSFLGFLIGMLLVALSIIIGFWTAKGFKWLLKRLNMRH 263

Query: 240 ANGS--SKINYKVDNYRRQLTLMLMSLVILAILWGVSGALVKAKFKHGGSAAQLWIACIV 297
            +G+  SK+++KVD++ RQL + ++ LVILA+LWGVS AL   +FK+GG  AQLW+ACIV
Sbjct: 264 GSGNFISKVSWKVDSFPRQLVVTIVLLVILALLWGVSSALEINEFKNGGGEAQLWLACIV 323

Query: 298 GPFGVWIRWFLA-RLNGRGLGKAGLYKWVPFGTLIANVSAACVMAALACVKTAVNTRNCD 356
           GP GVW+RWFLA RLN   +G  G  KW+ FGTLIAN SAAC+MAALA +K +VNT NCD
Sbjct: 324 GPLGVWLRWFLATRLNECEIG-GGFLKWLRFGTLIANFSAACIMAALATLKKSVNTTNCD 382

Query: 357 TVVGGIQFGLMGCLSTVSTFVAEINAMRESRHPWRAYAYAAMTICVSFSLGILIYCIP 414
           TV+ G+QFGL+GCLSTVSTFVAE+  M E++H WRA+ YA +TICVSFS GIL+Y IP
Sbjct: 383 TVITGLQFGLLGCLSTVSTFVAELYEMIENKHLWRAFVYAMVTICVSFSFGILLYYIP 440