Miyakogusa Predicted Gene

Lj5g3v1864530.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1864530.1 Non Characterized Hit- tr|B9RZ99|B9RZ99_RICCO 50S
ribosomal protein L21, mitochondrial, putative OS=,44.93,2e-18,50S
RIBOSOMAL PROTEIN L21,Ribosomal protein L21; seg,NULL;
Ribosomal_L21,Ribosomal protein L21; Ribo,CUFF.56086.1
         (213 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g096460.1 | 50S ribosomal protein L21 | HC | chr1:43452394...   233   8e-62
Medtr7g111750.3 | 50S ribosomal protein L21, related protein | H...    83   2e-16
Medtr7g111750.2 | 50S ribosomal protein L21, related protein | H...    83   2e-16
Medtr7g111750.1 | 50S ribosomal protein L21, related protein | H...    83   2e-16
Medtr2g058400.1 | 50S ribosomal protein L21, related protein | H...    80   1e-15

>Medtr1g096460.1 | 50S ribosomal protein L21 | HC |
           chr1:43452394-43449886 | 20130731
          Length = 212

 Score =  233 bits (595), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 132/217 (60%), Positives = 153/217 (70%), Gaps = 13/217 (5%)

Query: 1   MASATA-IVSTLCASFGTHCTITSTSKPLFS---QTSHSRFPTHSNKLSLQXXXXXXXXX 56
           MASATA  +STLC+SF THC+I    KP FS   Q   SRFP+H+  LS Q         
Sbjct: 1   MASATASTLSTLCSSFTTHCSI----KPHFSISHQPFSSRFPSHN--LSFQSTFSQRLPL 54

Query: 57  XXXXXKVSESAVAELETDVTTPQPEAGEIVPAQPPSWEPGLFAVVMVGGRQYIVHPGRWI 116
                K +ES+VA +++D    + E+ +IV  Q PSWE GLFAVVM+GGRQYIVHPGRW+
Sbjct: 55  LPAP-KSTESSVAPVDSDSQVSESESSQIV--QSPSWEKGLFAVVMIGGRQYIVHPGRWL 111

Query: 117 VVQRLKGAKANDKIALQKVLLVGTDTSCYIGKPIVSNAVVYATVEEQGFDPKVIVFXXXX 176
           VVQRLKGA  NDKIAL KVLLVGTDTSCYIGKP+V+NAVVYATVEEQG D KVIVF    
Sbjct: 112 VVQRLKGANVNDKIALHKVLLVGTDTSCYIGKPVVTNAVVYATVEEQGLDNKVIVFKYKR 171

Query: 177 XXXXXXXXXXXQPHTRLRINSIMGYENYPKVTMDDVK 213
                      QP+TR+RINSIMGYE+YPKVTMDD+ 
Sbjct: 172 KKKYRRTIGHRQPNTRIRINSIMGYEDYPKVTMDDIN 208


>Medtr7g111750.3 | 50S ribosomal protein L21, related protein | HC |
           chr7:45898598-45895061 | 20130731
          Length = 290

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 1/110 (0%)

Query: 93  WEPGLFAVVMVGGRQYIVHPGRWIVVQRLKGAKANDKIALQKVLLVGTDTSCYIGKPIVS 152
           +EP  FAVV +G  Q+ V  G  I  +RLK  + NDK+ L KVLL+G+ +   +G+PIV 
Sbjct: 157 YEPA-FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVP 215

Query: 153 NAVVYATVEEQGFDPKVIVFXXXXXXXXXXXXXXXQPHTRLRINSIMGYE 202
           +  V+A VEE   D KVI+F               Q  T+LRI +I G E
Sbjct: 216 DGAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRITNIEGVE 265


>Medtr7g111750.2 | 50S ribosomal protein L21, related protein | HC |
           chr7:45898965-45894633 | 20130731
          Length = 290

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 1/110 (0%)

Query: 93  WEPGLFAVVMVGGRQYIVHPGRWIVVQRLKGAKANDKIALQKVLLVGTDTSCYIGKPIVS 152
           +EP  FAVV +G  Q+ V  G  I  +RLK  + NDK+ L KVLL+G+ +   +G+PIV 
Sbjct: 157 YEPA-FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVP 215

Query: 153 NAVVYATVEEQGFDPKVIVFXXXXXXXXXXXXXXXQPHTRLRINSIMGYE 202
           +  V+A VEE   D KVI+F               Q  T+LRI +I G E
Sbjct: 216 DGAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRITNIEGVE 265


>Medtr7g111750.1 | 50S ribosomal protein L21, related protein | HC |
           chr7:45898944-45894633 | 20130731
          Length = 300

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 1/110 (0%)

Query: 93  WEPGLFAVVMVGGRQYIVHPGRWIVVQRLKGAKANDKIALQKVLLVGTDTSCYIGKPIVS 152
           +EP  FAVV +G  Q+ V  G  I  +RLK  + NDK+ L KVLL+G+ +   +G+PIV 
Sbjct: 167 YEPA-FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVP 225

Query: 153 NAVVYATVEEQGFDPKVIVFXXXXXXXXXXXXXXXQPHTRLRINSIMGYE 202
           +  V+A VEE   D KVI+F               Q  T+LRI +I G E
Sbjct: 226 DGAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRITNIEGVE 275


>Medtr2g058400.1 | 50S ribosomal protein L21, related protein | HC |
           chr2:24132316-24136266 | 20130731
          Length = 368

 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 58/105 (55%)

Query: 98  FAVVMVGGRQYIVHPGRWIVVQRLKGAKANDKIALQKVLLVGTDTSCYIGKPIVSNAVVY 157
           FAVV +G  Q+ V  G  I  +RLK  + NDK+ L KVLL+G+ +   +G+PIV +  V+
Sbjct: 239 FAVVEIGSHQFKVSNGDNIFTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVPDGAVH 298

Query: 158 ATVEEQGFDPKVIVFXXXXXXXXXXXXXXXQPHTRLRINSIMGYE 202
           A VEE   D KVI+F               Q  T+LRI +I G E
Sbjct: 299 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRITNIEGVE 343