Miyakogusa Predicted Gene

Lj5g3v1853220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1853220.1 Non Characterized Hit- tr|K3ZH00|K3ZH00_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si025852,39.06,5e-18,SMAD/FHA domain,SMAD/FHA domain; Forkhead
associated domain,Forkhead-associated (FHA) domain;
FHA,Fo,CUFF.56055.1
         (856 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g096000.1 | PIN domain protein | HC | chr1:43300842-433056...   377   e-104
Medtr7g017500.1 | kanadaptin-like protein | HC | chr7:5582550-55...    59   2e-08

>Medtr1g096000.1 | PIN domain protein | HC | chr1:43300842-43305675
           | 20130731
          Length = 1177

 Score =  377 bits (967), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 233/504 (46%), Positives = 308/504 (61%), Gaps = 54/504 (10%)

Query: 46  NNHTLVLGRHPDCNIVLTHPSISRFHLKILSTPSSRTLSLVDLSSVHGTWVCGRKLEPGE 105
           ++  L++GRHP+CNIVL HPSISRFHL+I   PSSR++SL+DLSSVHGTWVCGRKLE G 
Sbjct: 48  DDQILLVGRHPNCNIVLFHPSISRFHLQIRFNPSSRSISLLDLSSVHGTWVCGRKLEHGV 107

Query: 106 SVDLKEGDTFTLGISTRLYRLSRVPFVKDPRSDENLKLSVEQGIPVCCDEEMMRKGQSKD 165
           SVDLKEGDTF LG S+R+Y L  V    D  + +N+         + CD++  RK QS D
Sbjct: 108 SVDLKEGDTFQLGSSSRVYLLQFVSQFDDVDALKNIG-------SLGCDDK--RKDQSND 158

Query: 166 EDFEVLR---GTETSYLAPNSEIEDKLCGFQKHVLSPPYVQTVEEFDNKEKSEALPELEM 222
           E FE      GTETS        E+KLCG    +LSPPY Q+V+E DN +  EA PE+EM
Sbjct: 159 ETFEDENDSFGTETSCCNG----ENKLCGCHFCLLSPPYTQSVDETDNIQMGEACPEVEM 214

Query: 223 PEETNLFCTLREYLKHNICLPAVESVKGTNMKQFQGSLHTQLPSIEKHWLSLLSNIDP-A 281
           P ETNLFCTLRE  + NIC+P  E+V+G+ + Q Q S   QL             IDP +
Sbjct: 215 PGETNLFCTLRECFQQNICIPVAEAVQGSKLHQ-QSSAEKQL-------------IDPES 260

Query: 282 YLDEECDAEVPEIPNESGFGRTLRYNDNVEDEDTFTTGARTSNFENSCSVLGKDIPDSRF 341
              E+ D  V E+P ES F  T  Y          TTG R  N E        D+P S  
Sbjct: 261 SFGEKGDGAVDEVPKESEFEGTFEY--------IVTTGGRVFNSE--------DMPCSES 304

Query: 342 PQIKVVEGVSMDSPSYGEEQDICCRKYKSKMHDPNAKSCHEQRNSLVEVLEDIGNKCIKY 401
            Q    E VS+DS S GE+Q  C  +Y+S++ + NA SCH+Q+ S  E++EDIG +CI+ 
Sbjct: 305 HQTNTNEEVSVDSLSDGEKQGSCGEEYESELQNLNANSCHKQQYSPDEIVEDIGKQCIEN 364

Query: 402 IDPASFDEKGVTAVTVLPEEYEIGCTDEDDDRIEDILTTGARIFNYEST-SLLTEEANPV 460
           +DPAS +E GV A++V P+E+++    E++D I+D+L++ AR FN E+T SL+ E  + V
Sbjct: 365 MDPASSEENGVAALSVTPKEHKLEFFSEENDMIDDVLSSVARFFNSENTSSLVKETIHHV 424

Query: 461 TGFQKIKIVEEVVA-DSLPDGEKQNECGKELKSKLHMSGKSCEGNSLAEIGEDNEKSFRV 519
           T FQ+I  VEEV A DSL D EK+N+C  E K+ L++     EGNSL E  E+  KSF+ 
Sbjct: 425 TNFQQINTVEEVAAVDSLSDEEKENKCDVEFKAYLNIKPCDEEGNSLVETVEETVKSFQT 484

Query: 520 -----VSPNSSMLQEADLEITNKQ 538
                +S N+  L E  + +TN Q
Sbjct: 485 ESVNPLSVNTYSLVEDSIPVTNFQ 508



 Score =  211 bits (537), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 232/691 (33%), Positives = 329/691 (47%), Gaps = 170/691 (24%)

Query: 275 LSNIDPAYLDEECDAEVPEIPNESGFGRTLRYNDNVEDEDTFTTGARTSNFENSCSVLGK 334
           + N+DPA  +E   A +   P E         ND ++D    ++ AR  N EN+ S++ +
Sbjct: 362 IENMDPASSEENGVAALSVTPKEHKLEFFSEENDMIDD--VLSSVARFFNSENTSSLVKE 419

Query: 335 DIPD-SRFPQIKVVEGVS-MDSPSYGEEQDICCRKYKSKMHDPNAKSCHEQRNSLVEVLE 392
            I   + F QI  VE V+ +DS S  E+++ C  ++K+ +   N K C E+ NSLVE +E
Sbjct: 420 TIHHVTNFQQINTVEEVAAVDSLSDEEKENKCDVEFKAYL---NIKPCDEEGNSLVETVE 476

Query: 393 DIGNKCIKYIDPASFDEKGVTAVTVLPEEYEIGCTDEDDDRIEDILTTGARIFNYESTSL 452
           +            SF  + V  ++V                               +T  
Sbjct: 477 ET---------VKSFQTESVNPLSV-------------------------------NTYS 496

Query: 453 LTEEANPVTGFQKIKIVEEVV-ADSLPDGEKQNECGKELKSKLHMSGKSC-EGNSLAEIG 510
           L E++ PVT FQ I IV+EV   DSL D EK+NEC +E K+ L++  K C EG+SL E  
Sbjct: 497 LVEDSIPVTNFQLINIVDEVATVDSLSDEEKENECDEEFKAYLYV--KPCDEGSSLDETV 554

Query: 511 EDNEKSFRVVSPN------SSMLQEADLEITNKQ--------ESQTSQSNKVEI------ 550
           E+  KSF+  S N      SS+++EA + +TN Q         +  S SN+ +       
Sbjct: 555 EETVKSFQTESLNPSSGNTSSLVEEA-IPVTNFQLINIVEEVATVDSLSNEEKENECDEE 613

Query: 551 LESHVEATEKGKSTHKSDEIVQDTRNKCMGSISPTTLQVEPVNYSVPQESVLSITNKIEN 610
            ++++      +  +  DE V++T           + Q E +N SV QE+ L IT K EN
Sbjct: 614 FKAYLYVKPCDEEGNSLDETVEETVK---------SFQTESLNPSVTQETDLEITEKKEN 664

Query: 611 QTAQSLIAVTGCSEMEILXXXXXXXXXXXXXFG-NVWSRRGKAASAPQVRTRKSKFMSKG 669
           QT QSL+AV GC +++                G ++ SRR KAASAPQ RTRKS+ ++  
Sbjct: 665 QTLQSLVAVAGCFDVKFHENCVEESVEGSLTLGSDILSRRDKAASAPQDRTRKSRLLNTP 724

Query: 670 NVDTKVEM------DIKTKSVAKDPFFVLD-EEIFSPNKENSG-----SGVYMRKKGKLE 717
           +VDTK  M      +I  K + ++ F  LD EE+F+PNKENS         +MRKKG LE
Sbjct: 725 DVDTKFVMSNLKDINIINKPMPQNIFSDLDEEEMFTPNKENSSPTNTFHSQFMRKKGVLE 784

Query: 718 EIKHSKSQSSQALKANFSN-IYSAER---------------------------------- 742
           E K SKSQ +  LKA+FS+ IYSAER                                  
Sbjct: 785 ESKSSKSQRAHNLKASFSSIIYSAERCTSAISNKENQTPKSQRAHNLKASFSPIIYSAER 844

Query: 743 -ISSISKKDNLTPKVAQQWSSPR-------------------KPLESHINLAPPE----- 777
             S+IS K+NLTP+ A++W S R                     + +  NL P E     
Sbjct: 845 SASAISNKENLTPREAREWKSQRSHNLRASFSPIIYSAERSASAISNKENLTPKEALEWM 904

Query: 778 --------HDNMELKKNTVKRVPFQSLT----NSQDYSKLRTRGPVSAAKSIKD----AS 821
                    + MEL+K  V+R+P QSL     N    S   +  P SAAKSI      +S
Sbjct: 905 SGRNPLECRNTMELRKKRVERMPLQSLISSGGNHNSNSSPFSSSPFSAAKSILGVTVRSS 964

Query: 822 NCGLISEKCTKPSQFSEKRKRSWDMVVCISS 852
           NCG IS+K  +PS+ S +RKRSWD+VV  SS
Sbjct: 965 NCGHISDKHAQPSRISAERKRSWDLVVDTSS 995


>Medtr7g017500.1 | kanadaptin-like protein | HC |
           chr7:5582550-5572565 | 20130731
          Length = 827

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 51  VLGRHPDCNIVLTHPSISRFHLKILSTPSSRTLSLVDLSSVHGTWVCGRKLEPGESVDLK 110
           + GR   C+ VL HP+ISRFH  ++         L DL S HGT++   ++E    +DL+
Sbjct: 185 MFGRLDMCDFVLEHPTISRFHA-VIQFKRRGDAYLYDLGSTHGTFLNKNQVEKNTYIDLR 243

Query: 111 EGDTFTLGISTRLY 124
            GD    G STR++
Sbjct: 244 VGDVIRFGRSTRMF 257