Miyakogusa Predicted Gene

Lj5g3v1853110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1853110.1 Non Characterized Hit- tr|D8S013|D8S013_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,41.67,0.000000000000001,Glu-tRNAGln amidotransferase C
subunit,NULL; SUBFAMILY NOT NAMED,NULL; FROUNT PROTEIN-RELATED,NULL;
,CUFF.56067.1
         (139 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g095920.1 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfera...   167   2e-42

>Medtr1g095920.1 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase
           subunit C | HC | chr1:43184708-43187539 | 20130731
          Length = 134

 Score =  167 bits (423), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 93/107 (86%)

Query: 33  KFRSFSSTTICSSTQPPDLTSLAKKAQISLTPHQVDEFAPKIQQVIEWFGQLQSVDLQSV 92
           +FR  SS T CSS +PP+++ LAK A ISLTP +V+EF PKIQQVI WFGQLQ VDLQSV
Sbjct: 28  QFRRLSSKTNCSSLEPPNVSHLAKTAHISLTPTEVEEFGPKIQQVIGWFGQLQGVDLQSV 87

Query: 93  EPSLRAESENNLRENAPETFDSRDAMIASVPSYEEPYIKVPRVLSMD 139
           EPS+RA++ENNLR+N PETFD RDA++AS+P+YEEPYIKVP+VL++D
Sbjct: 88  EPSIRADTENNLRDNTPETFDQRDAILASIPTYEEPYIKVPKVLNVD 134