Miyakogusa Predicted Gene

Lj5g3v1816230.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1816230.4 tr|A8JH50|A8JH50_CHLRE Aminodeoxychorismate
synthase OS=Chlamydomonas reinhardtii GN=ADC1 PE=4
SV=1,26.23,2e-16,P-AMINOBENZOATE SYNTHASE,NULL;
AMINOBENZOATE/ANTHRANILATE SYNTHASE,NULL; Class I glutamine
amidotran,CUFF.56008.4
         (317 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g095360.1 | para-aminobenzoate synthase | HC | chr1:428881...   395   e-110
Medtr1g095360.2 | para-aminobenzoate synthase | HC | chr1:428881...   338   4e-93

>Medtr1g095360.1 | para-aminobenzoate synthase | HC |
           chr1:42888171-42898308 | 20130731
          Length = 873

 Score =  395 bits (1016), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 206/305 (67%), Positives = 228/305 (74%), Gaps = 40/305 (13%)

Query: 12  VVRYHSLVIDSESLPEELIPIAWTSSTTRLPFIGAKDSDKSNAHEIMTDKSVFVDPFLPK 71
           VVRYHSLVIDSESLPE LIPIAWTSS T LPFIG++  DK N HE+ TD+S+F+D  LP+
Sbjct: 216 VVRYHSLVIDSESLPEVLIPIAWTSSRT-LPFIGSEVLDKYNGHELQTDQSIFLDSLLPE 274

Query: 72  VGNRSSHLSDNGKTRNARVLMGIKHSTMPHYGVQFHPESVATCYGNQIFKNFKEITDDYW 131
            GN SS L + G+TRNARVLMG+KHST PHYGVQFHPESVATC+G+QIFKNF+EITDDYW
Sbjct: 275 AGNGSSSLVEYGQTRNARVLMGVKHSTRPHYGVQFHPESVATCHGSQIFKNFREITDDYW 334

Query: 132 LRFWSSCKKDKSAHFDACMQVSSASRLCREFHRSFSSEKKTMDQLEVVHEDRNLVHTNAE 191
           LR  SS  K K A+ DA  QVSSASRL R                       +LVH N E
Sbjct: 335 LRCRSSYNKGKHANSDAHAQVSSASRLYR-----------------------HLVHNNTE 371

Query: 192 MKGLEMLNILNVQHVGTGYKCLKLKWRKLDHLAGQVGGAKSIFCWLYGHEAENTFWLDSS 251
           +                 YK LKLKWRK DHLAGQVGGAKSIFC L+G EAENTFWLDSS
Sbjct: 372 VN----------------YKSLKLKWRKFDHLAGQVGGAKSIFCQLFGQEAENTFWLDSS 415

Query: 252 STEKGRARFSFMGGKGGSLWKQITFRLSDQSEGCSKGGGYLSLEDSQGSAKTIFLEDGFL 311
           STE GRARFSFMGGKGGSLWKQ+TFRLSDQS+G SKGGG+LSLEDS+G  KTIFLE GFL
Sbjct: 416 STEMGRARFSFMGGKGGSLWKQLTFRLSDQSDGSSKGGGHLSLEDSEGCVKTIFLEGGFL 475

Query: 312 DFLNK 316
           D+LNK
Sbjct: 476 DYLNK 480


>Medtr1g095360.2 | para-aminobenzoate synthase | HC |
           chr1:42888171-42898308 | 20130731
          Length = 838

 Score =  338 bits (867), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 186/305 (60%), Positives = 201/305 (65%), Gaps = 75/305 (24%)

Query: 12  VVRYHSLVIDSESLPEELIPIAWTSSTTRLPFIGAKDSDKSNAHEIMTDKSVFVDPFLPK 71
           VVRYHSLVIDSESLPE LIPIAWTS                                   
Sbjct: 216 VVRYHSLVIDSESLPEVLIPIAWTSR---------------------------------- 241

Query: 72  VGNRSSHLSDNGKTRNARVLMGIKHSTMPHYGVQFHPESVATCYGNQIFKNFKEITDDYW 131
             N SS L + G+TRNARVLMG+KHST PHYGVQFHPESVATC+G+QIFKNF+EITDDYW
Sbjct: 242 --NGSSSLVEYGQTRNARVLMGVKHSTRPHYGVQFHPESVATCHGSQIFKNFREITDDYW 299

Query: 132 LRFWSSCKKDKSAHFDACMQVSSASRLCREFHRSFSSEKKTMDQLEVVHEDRNLVHTNAE 191
           LR  SS  K K A+ DA  QVSSASRL R                       +LVH N E
Sbjct: 300 LRCRSSYNKGKHANSDAHAQVSSASRLYR-----------------------HLVHNNTE 336

Query: 192 MKGLEMLNILNVQHVGTGYKCLKLKWRKLDHLAGQVGGAKSIFCWLYGHEAENTFWLDSS 251
           +                 YK LKLKWRK DHLAGQVGGAKSIFC L+G EAENTFWLDSS
Sbjct: 337 VN----------------YKSLKLKWRKFDHLAGQVGGAKSIFCQLFGQEAENTFWLDSS 380

Query: 252 STEKGRARFSFMGGKGGSLWKQITFRLSDQSEGCSKGGGYLSLEDSQGSAKTIFLEDGFL 311
           STE GRARFSFMGGKGGSLWKQ+TFRLSDQS+G SKGGG+LSLEDS+G  KTIFLE GFL
Sbjct: 381 STEMGRARFSFMGGKGGSLWKQLTFRLSDQSDGSSKGGGHLSLEDSEGCVKTIFLEGGFL 440

Query: 312 DFLNK 316
           D+LNK
Sbjct: 441 DYLNK 445