Miyakogusa Predicted Gene

Lj5g3v1811650.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1811650.4 tr|G7I373|G7I373_MEDTR
Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit
OS=Medi,85.06,0,SUBFAMILY NOT NAMED,NULL; RIBOPHORIN I,Ribophorin I;
seg,NULL; Ribophorin_I,Ribophorin I,CUFF.56039.4
         (337 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g094870.1 | ribophorin I family protein | HC | chr1:426685...   557   e-159
Medtr3g115980.1 | ribophorin I family protein | HC | chr3:542228...   310   2e-84

>Medtr1g094870.1 | ribophorin I family protein | HC |
           chr1:42668514-42675153 | 20130731
          Length = 469

 Score =  557 bits (1436), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 274/336 (81%), Positives = 296/336 (88%), Gaps = 1/336 (0%)

Query: 2   EPLLRVPXXXXXXXXXXNLANSSSSQDVHIVNAERRIDLTSHIVKVYLTLKVENLGTSPV 61
           +PLLR+            L NS  SQ + I+NAERRIDL SHI+KVYLTLKVEN GT+P 
Sbjct: 6   QPLLRIALLFLFLHFSI-LVNSFPSQHLQIINAERRIDLNSHIIKVYLTLKVENSGTTPA 64

Query: 62  SEVHLAFSPTESEHLAIVKAAATSGKRKKKTYVPLDVKSAELPDGPNGTKFFSIALLTPL 121
           SEVHLAFSP E+EHLA++KAAAT+GKRKKKTYVPLDVKSAE+PDGPNG+KFF + LLTPL
Sbjct: 65  SEVHLAFSPAEAEHLAVLKAAATTGKRKKKTYVPLDVKSAEIPDGPNGSKFFPVTLLTPL 124

Query: 122 SKGETTTLEVLYRLTHSLEPFPVEISQSESQLVYFRDSAILLSPYHVKQQTTFIKTPSTR 181
           SKGETTTLEVLY LTHSLEPFPVEISQSESQLVYFRDSAILLSPYHVKQQTTFIKTP+ R
Sbjct: 125 SKGETTTLEVLYILTHSLEPFPVEISQSESQLVYFRDSAILLSPYHVKQQTTFIKTPTAR 184

Query: 182 VESFTVVEPTKRAGTELKYGXXXXXXXXXXXXVLVHFENNNPFAVVEELEREIEISHWGS 241
           VESFTVVEPTKRAGTELKYG            VLVHFENNNPFAVVEELEREIEISHWGS
Sbjct: 185 VESFTVVEPTKRAGTELKYGPYDEQTPYSYSPVLVHFENNNPFAVVEELEREIEISHWGS 244

Query: 242 VQVTERYRLVHAGARHKGVFSRVEYQTRSGGSGVSSFKNLLLKLPPRVHSVYYRDEIGNI 301
           +Q+TERY+LVHAGARHKGVFSRVEYQTRSG SGV+SFK+LL KLPPRVHSVYYRDEIGNI
Sbjct: 245 LQITERYKLVHAGARHKGVFSRVEYQTRSGASGVASFKHLLAKLPPRVHSVYYRDEIGNI 304

Query: 302 SSSHLRTDFLKSELEIEPRYPLFGGWKSTFVIGYGV 337
           SSSHLRTDFLKSELE EPRYPLFGGWKSTF++GYG+
Sbjct: 305 SSSHLRTDFLKSELEFEPRYPLFGGWKSTFLLGYGL 340


>Medtr3g115980.1 | ribophorin I family protein | HC |
           chr3:54222813-54229323 | 20130731
          Length = 617

 Score =  310 bits (793), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 159/312 (50%), Positives = 207/312 (66%), Gaps = 2/312 (0%)

Query: 28  DVHIVNAERRIDLTSHIVKVYLTLKVENLGTSPVSEVHLAFSPTESEHLAIVKAAATSGK 87
           D+ +   +RRIDL+S IV+   TLKVEN G+  VSE+ L F     +HLA + A    GK
Sbjct: 28  DLILTKVDRRIDLSSQIVRTTTTLKVENAGSDIVSEILLTFPDNHVKHLAYLSATLNEGK 87

Query: 88  RKKKTY--VPLDVKSAELPDGPNGTKFFSIALLTPLSKGETTTLEVLYRLTHSLEPFPVE 145
            K K++  V L  +     D P+    +S+ L   L K E+ T+++L   TH L+PFP +
Sbjct: 88  GKAKSFSGVGLPYEVVRPKDIPSSLATYSVTLPKGLGKAESLTMDILTVFTHILQPFPEK 147

Query: 146 ISQSESQLVYFRDSAILLSPYHVKQQTTFIKTPSTRVESFTVVEPTKRAGTELKYGXXXX 205
           I+Q++ QL+ F++SA  LSPY VK Q+  +K P  R+ES+T +E TK  G+ELKYG    
Sbjct: 148 ITQADIQLLLFQESAQYLSPYPVKVQSLNVKLPEARIESYTKLENTKLQGSELKYGPYEN 207

Query: 206 XXXXXXXXVLVHFENNNPFAVVEELEREIEISHWGSVQVTERYRLVHAGARHKGVFSRVE 265
                   +++HFENN PFAV +EL REIEISHWG+VQ+TE Y LVH GA+ KG FSR++
Sbjct: 208 LPPFSYLPIVIHFENNQPFAVAKELVREIEISHWGNVQITEHYNLVHGGAQSKGEFSRLD 267

Query: 266 YQTRSGGSGVSSFKNLLLKLPPRVHSVYYRDEIGNISSSHLRTDFLKSELEIEPRYPLFG 325
           YQ R    G S+F+ L  KLPPR HSVYYRDEIGNIS+S L  D  K+ELEIEPRYPLFG
Sbjct: 268 YQARPYVRGASAFRRLTAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPLFG 327

Query: 326 GWKSTFVIGYGV 337
           GWK+ F IGYG+
Sbjct: 328 GWKTAFTIGYGL 339