Miyakogusa Predicted Gene

Lj5g3v1810090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1810090.1 CUFF.55971.1
         (113 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g094680.1 | arsenical pump-driving ATPase-like protein | H...   219   4e-58
Medtr1g094680.2 | arsenical pump-driving ATPase-like protein | H...   219   5e-58
Medtr4g058005.1 | arsenical pump-driving ATPase-like protein | H...   171   1e-43
Medtr1g094680.3 | arsenical pump-driving ATPase-like protein | H...    50   5e-07
Medtr1g094680.4 | arsenical pump-driving ATPase-like protein | H...    50   5e-07

>Medtr1g094680.1 | arsenical pump-driving ATPase-like protein | HC |
           chr1:42569895-42565559 | 20130731
          Length = 406

 Score =  219 bits (558), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 107/113 (94%), Positives = 112/113 (99%)

Query: 1   MIKVRDLFRDTDSTEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQILPPSASDC 60
           MIKVR+LFRDTDSTEFVIVTIPTVMAV+ESSRLSASLKKESVPVKRLIVNQ+LPPSASDC
Sbjct: 294 MIKVRELFRDTDSTEFVIVTIPTVMAVNESSRLSASLKKESVPVKRLIVNQLLPPSASDC 353

Query: 61  KFCSMKRKDQTRALDMIQNDPELSSLLMIQAPLVDVEIRGVPALKFLGDIIWK 113
           KFC+MKRKDQTRALDMIQ+DPELSSL MIQAPLVDVEIRGVPALKFLGDIIWK
Sbjct: 354 KFCAMKRKDQTRALDMIQSDPELSSLSMIQAPLVDVEIRGVPALKFLGDIIWK 406


>Medtr1g094680.2 | arsenical pump-driving ATPase-like protein | HC |
           chr1:42569191-42565559 | 20130731
          Length = 357

 Score =  219 bits (558), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 107/113 (94%), Positives = 112/113 (99%)

Query: 1   MIKVRDLFRDTDSTEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQILPPSASDC 60
           MIKVR+LFRDTDSTEFVIVTIPTVMAV+ESSRLSASLKKESVPVKRLIVNQ+LPPSASDC
Sbjct: 245 MIKVRELFRDTDSTEFVIVTIPTVMAVNESSRLSASLKKESVPVKRLIVNQLLPPSASDC 304

Query: 61  KFCSMKRKDQTRALDMIQNDPELSSLLMIQAPLVDVEIRGVPALKFLGDIIWK 113
           KFC+MKRKDQTRALDMIQ+DPELSSL MIQAPLVDVEIRGVPALKFLGDIIWK
Sbjct: 305 KFCAMKRKDQTRALDMIQSDPELSSLSMIQAPLVDVEIRGVPALKFLGDIIWK 357


>Medtr4g058005.1 | arsenical pump-driving ATPase-like protein | HC |
           chr4:21502384-21495635 | 20130731
          Length = 381

 Score =  171 bits (434), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 79/111 (71%), Positives = 95/111 (85%), Gaps = 1/111 (0%)

Query: 3   KVRDLFRDTDSTEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQILPPSASDCKF 62
           K+RDLF ++D+TEF+IVTIPTVMA+SESSRL ASLK ESVPVKRLIVNQ+LPP+ + CKF
Sbjct: 272 KIRDLFHNSDTTEFIIVTIPTVMAISESSRLHASLKNESVPVKRLIVNQVLPPT-TGCKF 330

Query: 63  CSMKRKDQTRALDMIQNDPELSSLLMIQAPLVDVEIRGVPALKFLGDIIWK 113
           CSMK KDQ RA++ I ND EL  L + QAPLVD+EIRGVPAL F+GD +W+
Sbjct: 331 CSMKLKDQMRAIETIHNDSELGGLRLCQAPLVDMEIRGVPALTFMGDKLWR 381


>Medtr1g094680.3 | arsenical pump-driving ATPase-like protein | HC |
           chr1:42569895-42565559 | 20130731
          Length = 317

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/24 (95%), Positives = 24/24 (100%)

Query: 1   MIKVRDLFRDTDSTEFVIVTIPTV 24
           MIKVR+LFRDTDSTEFVIVTIPTV
Sbjct: 294 MIKVRELFRDTDSTEFVIVTIPTV 317


>Medtr1g094680.4 | arsenical pump-driving ATPase-like protein | HC |
           chr1:42569201-42565559 | 20130731
          Length = 243

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/24 (95%), Positives = 24/24 (100%)

Query: 1   MIKVRDLFRDTDSTEFVIVTIPTV 24
           MIKVR+LFRDTDSTEFVIVTIPTV
Sbjct: 220 MIKVRELFRDTDSTEFVIVTIPTV 243