Miyakogusa Predicted Gene

Lj5g3v1796800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1796800.1 Non Characterized Hit- tr|I1LCX5|I1LCX5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54113
PE,88.29,0,seg,NULL; Sec1,Sec1-like protein; Sec1/munc18-like (SM)
proteins,Sec1-like protein; no description,N,CUFF.55955.1
         (572 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g094200.1 | vacuolar protein sorting-associated protein | ...   981   0.0  
Medtr1g094200.2 | vacuolar protein sorting-associated protein | ...   969   0.0  
Medtr1g094200.3 | vacuolar protein sorting-associated protein | ...   818   0.0  

>Medtr1g094200.1 | vacuolar protein sorting-associated protein | HC
           | chr1:42397041-42408094 | 20130731
          Length = 596

 Score =  981 bits (2535), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/572 (83%), Positives = 515/572 (90%)

Query: 1   MAQIPNLDNAPLNLTAIREQSQKELIHILKHVRGKKCLVIDPKLGDSLSLIIQTSSLKEH 60
           MAQIPNLDNAP+NLT+IREQSQKELI+ILK+VRGKKCLVIDPKLGDSLSL IQTS LKE 
Sbjct: 1   MAQIPNLDNAPVNLTSIREQSQKELINILKNVRGKKCLVIDPKLGDSLSLTIQTSILKEQ 60

Query: 61  GAELRHLSAEPVQTDCTKVVYLVRAQLKLMRFICSSIHNDVSNGLQREYYVYFVPRRTXX 120
           G ELRHLSAEP+Q+DC KV++LVR+QL LMRFICS++H+D+S GLQREY+VYFVPRRT  
Sbjct: 61  GVELRHLSAEPIQSDCNKVIFLVRSQLNLMRFICSNVHDDISKGLQREYHVYFVPRRTVA 120

Query: 121 XXXXXXXXXXHHMVTIGEYPLYVVPLDEDVLSFELDLSYKECEVDGDTSSLWHIAKAIHK 180
                     HHM+TIGEYPLY+V +DEDVLSFELDLSYKEC+VDGD SSLWHIAKAIHK
Sbjct: 121 CEKVLEDEKLHHMITIGEYPLYMVAMDEDVLSFELDLSYKECQVDGDASSLWHIAKAIHK 180

Query: 181 LEFSFGVIPNVRAKGRASVRVADILNRMQAEEPVNSSDMAVPEINTVILLDREVDMVTPL 240
           LEFSFGVIP+VRAKG+ASVR+ADILNRM+AEEP+NSSDMAVPEINTVILLDREVDMVTPL
Sbjct: 181 LEFSFGVIPHVRAKGKASVRIADILNRMEAEEPINSSDMAVPEINTVILLDREVDMVTPL 240

Query: 241 CSQLTYEGLLDEFLHINNGSVELDASIMGLQQEGKKTKVPLNSSDKLLKEIRDLNFEVVV 300
           CSQLTYEGL+DEFLHINNGSVE+DAS++GLQQEGKKTKVPLNSSDKL KEIRDLNFEVVV
Sbjct: 241 CSQLTYEGLIDEFLHINNGSVEIDASVLGLQQEGKKTKVPLNSSDKLFKEIRDLNFEVVV 300

Query: 301 QILRQKATSMKXXXXXXXXXXXXVSDLKDFVKKLNSLPEITRHINLAQHLSTFTSKPSFL 360
           QILRQKATSMK            VS+LKDFVKKLNSLPE+TRHINLAQHLSTFTSKPSFL
Sbjct: 301 QILRQKATSMKQDYTDMTTTTQSVSELKDFVKKLNSLPEMTRHINLAQHLSTFTSKPSFL 360

Query: 361 GQLDMEHTIIEAQSYDICFDYIEELIHKQEPLTTVLRLLILFSITNSGLPKKQFDYFRRE 420
           GQLDMEHTIIE+QSYDICF+YIEELIHKQEPLTTVLRLL+LFSITN+GLPKK FDYFRRE
Sbjct: 361 GQLDMEHTIIESQSYDICFEYIEELIHKQEPLTTVLRLLVLFSITNAGLPKKHFDYFRRE 420

Query: 421 LLHSYGFEHIATLNNLEKAGLFKKQDSKSNWLTIKRTLQLVVEDVDTANPSDIAYVFSGY 480
           LLHSYGFEHIATLNNLEKAGLFKKQ+SKSNWLTIKRTLQLVVED DTANP+DIAYVFSGY
Sbjct: 421 LLHSYGFEHIATLNNLEKAGLFKKQESKSNWLTIKRTLQLVVEDTDTANPNDIAYVFSGY 480

Query: 481 APLSIRLVQHAIRSGWRPVEETLKLLPGPHLETRRGGFSNSPSFDTLSGVSTSIAKVPDG 540
           APLSIRL+QHAIRSGWRPVEE LKLLPGPHLETRRGGFSNSPSFDT  GVS SI KVPDG
Sbjct: 481 APLSIRLIQHAIRSGWRPVEEVLKLLPGPHLETRRGGFSNSPSFDTFYGVSNSIDKVPDG 540

Query: 541 XXXXXXXXXXXXXXXXEISALRFLSSQESMAY 572
                           EISALRFLS+QE+MAY
Sbjct: 541 RRSLVLVVFVGGVTFAEISALRFLSAQENMAY 572


>Medtr1g094200.2 | vacuolar protein sorting-associated protein | HC
           | chr1:42397114-42408078 | 20130731
          Length = 593

 Score =  969 bits (2505), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/567 (83%), Positives = 510/567 (89%)

Query: 1   MAQIPNLDNAPLNLTAIREQSQKELIHILKHVRGKKCLVIDPKLGDSLSLIIQTSSLKEH 60
           MAQIPNLDNAP+NLT+IREQSQKELI+ILK+VRGKKCLVIDPKLGDSLSL IQTS LKE 
Sbjct: 1   MAQIPNLDNAPVNLTSIREQSQKELINILKNVRGKKCLVIDPKLGDSLSLTIQTSILKEQ 60

Query: 61  GAELRHLSAEPVQTDCTKVVYLVRAQLKLMRFICSSIHNDVSNGLQREYYVYFVPRRTXX 120
           G ELRHLSAEP+Q+DC KV++LVR+QL LMRFICS++H+D+S GLQREY+VYFVPRRT  
Sbjct: 61  GVELRHLSAEPIQSDCNKVIFLVRSQLNLMRFICSNVHDDISKGLQREYHVYFVPRRTVA 120

Query: 121 XXXXXXXXXXHHMVTIGEYPLYVVPLDEDVLSFELDLSYKECEVDGDTSSLWHIAKAIHK 180
                     HHM+TIGEYPLY+V +DEDVLSFELDLSYKEC+VDGD SSLWHIAKAIHK
Sbjct: 121 CEKVLEDEKLHHMITIGEYPLYMVAMDEDVLSFELDLSYKECQVDGDASSLWHIAKAIHK 180

Query: 181 LEFSFGVIPNVRAKGRASVRVADILNRMQAEEPVNSSDMAVPEINTVILLDREVDMVTPL 240
           LEFSFGVIP+VRAKG+ASVR+ADILNRM+AEEP+NSSDMAVPEINTVILLDREVDMVTPL
Sbjct: 181 LEFSFGVIPHVRAKGKASVRIADILNRMEAEEPINSSDMAVPEINTVILLDREVDMVTPL 240

Query: 241 CSQLTYEGLLDEFLHINNGSVELDASIMGLQQEGKKTKVPLNSSDKLLKEIRDLNFEVVV 300
           CSQLTYEGL+DEFLHINNGSVE+DAS++GLQQEGKKTKVPLNSSDKL KEIRDLNFEVVV
Sbjct: 241 CSQLTYEGLIDEFLHINNGSVEIDASVLGLQQEGKKTKVPLNSSDKLFKEIRDLNFEVVV 300

Query: 301 QILRQKATSMKXXXXXXXXXXXXVSDLKDFVKKLNSLPEITRHINLAQHLSTFTSKPSFL 360
           QILRQKATSMK            VS+LKDFVKKLNSLPE+TRHINLAQHLSTFTSKPSFL
Sbjct: 301 QILRQKATSMKQDYTDMTTTTQSVSELKDFVKKLNSLPEMTRHINLAQHLSTFTSKPSFL 360

Query: 361 GQLDMEHTIIEAQSYDICFDYIEELIHKQEPLTTVLRLLILFSITNSGLPKKQFDYFRRE 420
           GQLDMEHTIIE+QSYDICF+YIEELIHKQEPLTTVLRLL+LFSITN+GLPKK FDYFRRE
Sbjct: 361 GQLDMEHTIIESQSYDICFEYIEELIHKQEPLTTVLRLLVLFSITNAGLPKKHFDYFRRE 420

Query: 421 LLHSYGFEHIATLNNLEKAGLFKKQDSKSNWLTIKRTLQLVVEDVDTANPSDIAYVFSGY 480
           LLHSYGFEHIATLNNLEKAGLFKKQ+SKSNWLTIKRTLQLVVED DTANP+DIAYVFSGY
Sbjct: 421 LLHSYGFEHIATLNNLEKAGLFKKQESKSNWLTIKRTLQLVVEDTDTANPNDIAYVFSGY 480

Query: 481 APLSIRLVQHAIRSGWRPVEETLKLLPGPHLETRRGGFSNSPSFDTLSGVSTSIAKVPDG 540
           APLSIRL+QHAIRSGWRPVEE LKLLPGPHLETRRGGFSNSPSFDT  GVS SI KVPDG
Sbjct: 481 APLSIRLIQHAIRSGWRPVEEVLKLLPGPHLETRRGGFSNSPSFDTFYGVSNSIDKVPDG 540

Query: 541 XXXXXXXXXXXXXXXXEISALRFLSSQ 567
                           EISALRFLS+Q
Sbjct: 541 RRSLVLVVFVGGVTFAEISALRFLSAQ 567


>Medtr1g094200.3 | vacuolar protein sorting-associated protein | HC
           | chr1:42397041-42404027 | 20130731
          Length = 469

 Score =  818 bits (2112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/468 (85%), Positives = 432/468 (92%)

Query: 1   MAQIPNLDNAPLNLTAIREQSQKELIHILKHVRGKKCLVIDPKLGDSLSLIIQTSSLKEH 60
           MAQIPNLDNAP+NLT+IREQSQKELI+ILK+VRGKKCLVIDPKLGDSLSL IQTS LKE 
Sbjct: 1   MAQIPNLDNAPVNLTSIREQSQKELINILKNVRGKKCLVIDPKLGDSLSLTIQTSILKEQ 60

Query: 61  GAELRHLSAEPVQTDCTKVVYLVRAQLKLMRFICSSIHNDVSNGLQREYYVYFVPRRTXX 120
           G ELRHLSAEP+Q+DC KV++LVR+QL LMRFICS++H+D+S GLQREY+VYFVPRRT  
Sbjct: 61  GVELRHLSAEPIQSDCNKVIFLVRSQLNLMRFICSNVHDDISKGLQREYHVYFVPRRTVA 120

Query: 121 XXXXXXXXXXHHMVTIGEYPLYVVPLDEDVLSFELDLSYKECEVDGDTSSLWHIAKAIHK 180
                     HHM+TIGEYPLY+V +DEDVLSFELDLSYKEC+VDGD SSLWHIAKAIHK
Sbjct: 121 CEKVLEDEKLHHMITIGEYPLYMVAMDEDVLSFELDLSYKECQVDGDASSLWHIAKAIHK 180

Query: 181 LEFSFGVIPNVRAKGRASVRVADILNRMQAEEPVNSSDMAVPEINTVILLDREVDMVTPL 240
           LEFSFGVIP+VRAKG+ASVR+ADILNRM+AEEP+NSSDMAVPEINTVILLDREVDMVTPL
Sbjct: 181 LEFSFGVIPHVRAKGKASVRIADILNRMEAEEPINSSDMAVPEINTVILLDREVDMVTPL 240

Query: 241 CSQLTYEGLLDEFLHINNGSVELDASIMGLQQEGKKTKVPLNSSDKLLKEIRDLNFEVVV 300
           CSQLTYEGL+DEFLHINNGSVE+DAS++GLQQEGKKTKVPLNSSDKL KEIRDLNFEVVV
Sbjct: 241 CSQLTYEGLIDEFLHINNGSVEIDASVLGLQQEGKKTKVPLNSSDKLFKEIRDLNFEVVV 300

Query: 301 QILRQKATSMKXXXXXXXXXXXXVSDLKDFVKKLNSLPEITRHINLAQHLSTFTSKPSFL 360
           QILRQKATSMK            VS+LKDFVKKLNSLPE+TRHINLAQHLSTFTSKPSFL
Sbjct: 301 QILRQKATSMKQDYTDMTTTTQSVSELKDFVKKLNSLPEMTRHINLAQHLSTFTSKPSFL 360

Query: 361 GQLDMEHTIIEAQSYDICFDYIEELIHKQEPLTTVLRLLILFSITNSGLPKKQFDYFRRE 420
           GQLDMEHTIIE+QSYDICF+YIEELIHKQEPLTTVLRLL+LFSITN+GLPKK FDYFRRE
Sbjct: 361 GQLDMEHTIIESQSYDICFEYIEELIHKQEPLTTVLRLLVLFSITNAGLPKKHFDYFRRE 420

Query: 421 LLHSYGFEHIATLNNLEKAGLFKKQDSKSNWLTIKRTLQLVVEDVDTA 468
           LLHSYGFEHIATLNNLEKAGLFKKQ+SKSNWLTIKRTLQLVVED DTA
Sbjct: 421 LLHSYGFEHIATLNNLEKAGLFKKQESKSNWLTIKRTLQLVVEDTDTA 468