Miyakogusa Predicted Gene

Lj5g3v1793350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1793350.1 Non Characterized Hit- tr|D8S908|D8S908_SELML
Putative uncharacterized protein OS=Selaginella
moelle,41.54,5e-19,AWPM-19,AWPM-19-like; seg,NULL,CUFF.55923.1
         (177 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g094035.1 | ABA induced plasma membrane protein | HC | chr...   270   5e-73
Medtr6g068860.1 | ABA induced plasma membrane protein | HC | chr...    85   4e-17
Medtr2g049340.1 | ABA induced plasma membrane protein | HC | chr...    84   9e-17
Medtr4g117600.1 | ABA induced plasma membrane protein | HC | chr...    65   2e-11

>Medtr1g094035.1 | ABA induced plasma membrane protein | HC |
           chr1:42229133-42230198 | 20130731
          Length = 179

 Score =  270 bits (690), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 136/181 (75%), Positives = 146/181 (80%), Gaps = 9/181 (4%)

Query: 2   AVGRNVAAPLLFLNLIMYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFLIFSILAAV 61
           +VGRNV  PLLFLNL+MYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFL FSILAAV
Sbjct: 3   SVGRNVLGPLLFLNLVMYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFLTFSILAAV 62

Query: 62  LGIVSKFIGGNHIRAWRSDSXXXXXXXXXXXXXXXXXXMGLACKQIHIGGHRGWRLRIVE 121
           LGIVSKF+G NH+R WRSDS                  MGLACKQIHIGGHRGWRL++VE
Sbjct: 63  LGIVSKFMGANHLRFWRSDSLASAGATSVIAWAVTALAMGLACKQIHIGGHRGWRLKMVE 122

Query: 122 AFIIILTFTQLLYLMLIHAGIYSSRYGPGYRDTDYG-----TGDPLHKGGAGHVPVAGTR 176
           AFIIILTFTQLL L+L HAG+Y+SRYGPGYRDTDYG     TGDP+HKGG    PV GTR
Sbjct: 123 AFIIILTFTQLLCLLLTHAGLYNSRYGPGYRDTDYGVGGGATGDPMHKGG----PVGGTR 178

Query: 177 V 177
           V
Sbjct: 179 V 179


>Medtr6g068860.1 | ABA induced plasma membrane protein | HC |
           chr6:24750337-24752005 | 20130731
          Length = 157

 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 77/148 (52%), Gaps = 14/148 (9%)

Query: 5   RNVAAPLLFLNLIMYFIVLGFASWCLNR-----FINGQT------YHPSF--GGNGATMF 51
           ++VA  LL LN  MY IV+G  +W +NR     FI G        + P F   GN +T F
Sbjct: 2   KSVATLLLVLNFCMYVIVIGIGAWAMNRAIDHGFIIGPELNLPAHFSPIFFPMGNASTGF 61

Query: 52  FLIFSILAAVLGIVSKFIGGNHIRAWRSDSXXXXXXXXXXXXXXXXXXMGLACKQIHIGG 111
           F+  S+LA V+G  S   G  HI +W ++S                  MG A K+I +  
Sbjct: 62  FVTISLLAGVIGAASTISGVKHICSWTAESLPSAASIATLAWTLTLLAMGFAWKEIEL-Q 120

Query: 112 HRGWRLRIVEAFIIILTFTQLLYLMLIH 139
            R  RL+ +EAFIIIL+ TQLLY++ IH
Sbjct: 121 IRNARLKTMEAFIIILSVTQLLYIVAIH 148


>Medtr2g049340.1 | ABA induced plasma membrane protein | HC |
           chr2:21744400-21742691 | 20130731
          Length = 160

 Score = 83.6 bits (205), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 72/143 (50%), Gaps = 14/143 (9%)

Query: 5   RNVAAPLLFLNLIMYFIVLGFASWCLNRFIN-GQTYHPSFG------------GNGATMF 51
           + +A  LL LN  MY IV+    W +NR I+ G    P F             GN AT F
Sbjct: 7   KPIATLLLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMGNAATGF 66

Query: 52  FLIFSILAAVLGIVSKFIGGNHIRAWRSDSXXXXXXXXXXXXXXXXXXMGLACKQIHIGG 111
           F+ F+++A V+GI S   G NHIR+W S+S                  MG  CK+I +  
Sbjct: 67  FVTFALIAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCKEIQL-N 125

Query: 112 HRGWRLRIVEAFIIILTFTQLLY 134
            R  RL+ +EAF+IILT TQL Y
Sbjct: 126 IRNSRLKTMEAFLIILTATQLFY 148


>Medtr4g117600.1 | ABA induced plasma membrane protein | HC |
           chr4:48786110-48787634 | 20130731
          Length = 164

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 24/143 (16%)

Query: 17  IMYFIVLGFASWCLNRFI--NGQT-------------YHPSFGGNGATMFFLIFSILAAV 61
           ++YFIV+  ASW +N  I  +G+              Y P   GN  T FF+IF+++A V
Sbjct: 19  VLYFIVIVIASWAMNHGIQRSGEAASVLTTPAHIFPIYFPM--GNMTTGFFIIFTLIAGV 76

Query: 62  LGIVSKFIGGNHIRAWRSDSXXXXXXXXXXXXXXXXXXMGLACKQIHIGGHRGW---RLR 118
           +G  +   G N+I  W + +                  MG ACK+I     RGW    LR
Sbjct: 77  VGFTTSVTGLNNIFQWNAPNLNAAAMSSLTTWALTLLAMGFACKEI----ERGWTDSNLR 132

Query: 119 IVEAFIIILTFTQLLYLMLIHAG 141
            +E   II+T TQLL   +IH G
Sbjct: 133 TLETITIIVTATQLLCTTVIHVG 155