Miyakogusa Predicted Gene

Lj5g3v1770480.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1770480.2 tr|C1MXS9|C1MXS9_MICPC Predicted protein
(Fragment) OS=Micromonas pusilla (strain CCMP1545)
GN=MICPU,40.51,0.000000000001,PREDICTED PROTEIN,NULL; KELCH REPEAT
DOMAIN,NULL; Kelch motif,NULL; Kelch_3,NULL; no
description,Kel,CUFF.55871.2
         (168 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g492850.2 | galactose oxidase/kelch repeat protein | HC | ...   269   1e-72
Medtr1g492850.3 | galactose oxidase/kelch repeat protein | HC | ...   268   1e-72
Medtr1g492850.1 | galactose oxidase/kelch repeat protein | HC | ...   268   2e-72

>Medtr1g492850.2 | galactose oxidase/kelch repeat protein | HC |
           chr1:41637589-41646075 | 20130731
          Length = 395

 Score =  269 bits (687), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 138/167 (82%), Positives = 149/167 (89%)

Query: 1   MFGGHGTGGWLSRYDIYYNDCIILDRVSAQWKRLSIGNEPPPARAYHSLTMIGSRYLLIG 60
           MFGGHGTGGWLSRYDIYYNDC++LDRVSA WKRLS+GNEPPPARAYHS+T IGSRYLLIG
Sbjct: 144 MFGGHGTGGWLSRYDIYYNDCVVLDRVSATWKRLSVGNEPPPARAYHSMTAIGSRYLLIG 203

Query: 61  GFDGKSTYGDSWWLVPQEDPIANRLTASPPRNILEIKDATSLNDDFQPQMKDNQTEKFHF 120
           GFDGKSTYG+ WWLVPQ+DPIANRLTASPPRNI E KDA SLN +FQPQ ++NQ EKF  
Sbjct: 204 GFDGKSTYGEPWWLVPQDDPIANRLTASPPRNISESKDAASLNGNFQPQFQENQVEKFPL 263

Query: 121 SELQRRLQISVSPSNSRLPIVNELDDKELLELASRLAGDEGSAKSLV 167
           SELQRRLQ+SVS SNS LPIVNEL+DKELLELASRLAG   SA SL 
Sbjct: 264 SELQRRLQLSVSQSNSMLPIVNELEDKELLELASRLAGQNVSANSLA 310


>Medtr1g492850.3 | galactose oxidase/kelch repeat protein | HC |
           chr1:41637589-41646075 | 20130731
          Length = 460

 Score =  268 bits (686), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 138/167 (82%), Positives = 149/167 (89%)

Query: 1   MFGGHGTGGWLSRYDIYYNDCIILDRVSAQWKRLSIGNEPPPARAYHSLTMIGSRYLLIG 60
           MFGGHGTGGWLSRYDIYYNDC++LDRVSA WKRLS+GNEPPPARAYHS+T IGSRYLLIG
Sbjct: 249 MFGGHGTGGWLSRYDIYYNDCVVLDRVSATWKRLSVGNEPPPARAYHSMTAIGSRYLLIG 308

Query: 61  GFDGKSTYGDSWWLVPQEDPIANRLTASPPRNILEIKDATSLNDDFQPQMKDNQTEKFHF 120
           GFDGKSTYG+ WWLVPQ+DPIANRLTASPPRNI E KDA SLN +FQPQ ++NQ EKF  
Sbjct: 309 GFDGKSTYGEPWWLVPQDDPIANRLTASPPRNISESKDAASLNGNFQPQFQENQVEKFPL 368

Query: 121 SELQRRLQISVSPSNSRLPIVNELDDKELLELASRLAGDEGSAKSLV 167
           SELQRRLQ+SVS SNS LPIVNEL+DKELLELASRLAG   SA SL 
Sbjct: 369 SELQRRLQLSVSQSNSMLPIVNELEDKELLELASRLAGQNVSANSLA 415


>Medtr1g492850.1 | galactose oxidase/kelch repeat protein | HC |
           chr1:41637587-41646075 | 20130731
          Length = 500

 Score =  268 bits (685), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 138/167 (82%), Positives = 149/167 (89%)

Query: 1   MFGGHGTGGWLSRYDIYYNDCIILDRVSAQWKRLSIGNEPPPARAYHSLTMIGSRYLLIG 60
           MFGGHGTGGWLSRYDIYYNDC++LDRVSA WKRLS+GNEPPPARAYHS+T IGSRYLLIG
Sbjct: 249 MFGGHGTGGWLSRYDIYYNDCVVLDRVSATWKRLSVGNEPPPARAYHSMTAIGSRYLLIG 308

Query: 61  GFDGKSTYGDSWWLVPQEDPIANRLTASPPRNILEIKDATSLNDDFQPQMKDNQTEKFHF 120
           GFDGKSTYG+ WWLVPQ+DPIANRLTASPPRNI E KDA SLN +FQPQ ++NQ EKF  
Sbjct: 309 GFDGKSTYGEPWWLVPQDDPIANRLTASPPRNISESKDAASLNGNFQPQFQENQVEKFPL 368

Query: 121 SELQRRLQISVSPSNSRLPIVNELDDKELLELASRLAGDEGSAKSLV 167
           SELQRRLQ+SVS SNS LPIVNEL+DKELLELASRLAG   SA SL 
Sbjct: 369 SELQRRLQLSVSQSNSMLPIVNELEDKELLELASRLAGQNVSANSLA 415