Miyakogusa Predicted Gene

Lj5g3v1769400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1769400.1 tr|Q5N8V3|Q5N8V3_ORYSJ Auxin-regulated
protein-like OS=Oryza sativa subsp. japonica GN=P0035F12.18
P,57.5,2e-18,OTU,Ovarian tumour, otubain; Cysteine proteinases,NULL;
SUBFAMILY NOT NAMED,NULL; OTU DOMAIN CONTAIN,CUFF.55865.1
         (105 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g492730.1 | OTU-like cysteine protease | HC | chr1:4156678...   175   1e-44
Medtr1g052405.2 | OTU-like cysteine protease | HC | chr1:2126899...   148   9e-37
Medtr1g052405.1 | OTU-like cysteine protease | HC | chr1:2126899...   148   9e-37
Medtr3g085620.1 | OTU-like cysteine protease | HC | chr3:3871118...   130   3e-31
Medtr1g052380.1 | OTU-like cysteine protease | HC | chr1:2125334...   109   7e-25
Medtr4g014750.1 | OTU-like cysteine protease | HC | chr4:4213542...    55   2e-08

>Medtr1g492730.1 | OTU-like cysteine protease | HC |
           chr1:41566786-41570169 | 20130731
          Length = 305

 Score =  175 bits (443), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 84/104 (80%), Positives = 94/104 (90%)

Query: 2   ELADELRAKVAEELLNRREETEWFIEGDFDLYVTRMQKPCVWGGEPEILMASHVLKTPIS 61
           ELADELR KVAEELLNRR+ETEWFIEGDFD YVTR+Q+  VWGGEPE+LMASHVLKTPI 
Sbjct: 201 ELADELRVKVAEELLNRRKETEWFIEGDFDTYVTRIQQTYVWGGEPELLMASHVLKTPIY 260

Query: 62  VFMRDTSSTEIVNIAKYGEEYRNGKDISINVLFHGYGHYEILET 105
           VFMRD SS ++VNIAKYGEEY N ++ISINVLFH +GHYE+LET
Sbjct: 261 VFMRDASSMDLVNIAKYGEEYMNDEEISINVLFHRHGHYELLET 304


>Medtr1g052405.2 | OTU-like cysteine protease | HC |
           chr1:21268997-21273587 | 20130731
          Length = 337

 Score =  148 bits (374), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 64/103 (62%), Positives = 86/103 (83%), Gaps = 2/103 (1%)

Query: 2   ELADELRAKVAEELLNRREETEWFIEGDFDLYVTRMQKPCVWGGEPEILMASHVLKTPIS 61
           ELAD+LRAKVA+E + RREETEWFIEGDFD Y+++++KP VWGGEPE+ +ASHVL+ PI+
Sbjct: 226 ELADDLRAKVADEFIKRREETEWFIEGDFDSYISQIRKPHVWGGEPELFIASHVLQMPIT 285

Query: 62  VFMRDTSSTEIVNIAKYGEEYRNGKDISINVLFHGYGHYEILE 104
           V+M D  +  +++IA+YGEEY  GK+  I VL+HG+GHY+ LE
Sbjct: 286 VYMYDQEAGGLISIAEYGEEY--GKENPIRVLYHGFGHYDALE 326


>Medtr1g052405.1 | OTU-like cysteine protease | HC |
           chr1:21268997-21273669 | 20130731
          Length = 337

 Score =  148 bits (374), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 64/103 (62%), Positives = 86/103 (83%), Gaps = 2/103 (1%)

Query: 2   ELADELRAKVAEELLNRREETEWFIEGDFDLYVTRMQKPCVWGGEPEILMASHVLKTPIS 61
           ELAD+LRAKVA+E + RREETEWFIEGDFD Y+++++KP VWGGEPE+ +ASHVL+ PI+
Sbjct: 226 ELADDLRAKVADEFIKRREETEWFIEGDFDSYISQIRKPHVWGGEPELFIASHVLQMPIT 285

Query: 62  VFMRDTSSTEIVNIAKYGEEYRNGKDISINVLFHGYGHYEILE 104
           V+M D  +  +++IA+YGEEY  GK+  I VL+HG+GHY+ LE
Sbjct: 286 VYMYDQEAGGLISIAEYGEEY--GKENPIRVLYHGFGHYDALE 326


>Medtr3g085620.1 | OTU-like cysteine protease | HC |
           chr3:38711189-38713908 | 20130731
          Length = 177

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 59/103 (57%), Positives = 82/103 (79%), Gaps = 2/103 (1%)

Query: 2   ELADELRAKVAEELLNRREETEWFIEGDFDLYVTRMQKPCVWGGEPEILMASHVLKTPIS 61
           ELADELRAKV +E + RR +TEWF+EGDF+ Y  +M+K  VWGGEPE+LM+SHVL+ PI+
Sbjct: 74  ELADELRAKVVDEFIKRRVDTEWFLEGDFNTYTVQMRKAQVWGGEPELLMSSHVLQMPIT 133

Query: 62  VFMRDTSSTEIVNIAKYGEEYRNGKDISINVLFHGYGHYEILE 104
           V M+DT+S  +  IA+YG+EY  GK+  I V++ G+GHY++L+
Sbjct: 134 VVMQDTNSNNLKIIAEYGQEY--GKENPIRVIYDGFGHYDVLK 174


>Medtr1g052380.1 | OTU-like cysteine protease | HC |
           chr1:21253346-21255101 | 20130731
          Length = 221

 Score =  109 bits (272), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 80/104 (76%), Gaps = 3/104 (2%)

Query: 2   ELADELRAKVAEELLNRREE-TEWFIEGDFDLYVTRMQKPCVWGGEPEILMASHVLKTPI 60
           ELAD+LR KVA+E + R+E+  +WFIEGDF+  +++++KP VWG EPE+ +ASHVL+ PI
Sbjct: 92  ELADDLRDKVADEYVKRKEQMKQWFIEGDFESNISQIRKPHVWGDEPELFIASHVLQMPI 151

Query: 61  SVFMRDTSSTEIVNIAKYGEEYRNGKDISINVLFHGYGHYEILE 104
           +V++ D  +  +++ ++YG+EY  GK+  I VL++G+ HY+ LE
Sbjct: 152 AVYVYDPKAGGLISKSEYGQEY--GKENPIRVLYNGFTHYDALE 193


>Medtr4g014750.1 | OTU-like cysteine protease | HC |
           chr4:4213542-4209698 | 20130731
          Length = 229

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 15/117 (12%)

Query: 2   ELADELRAKVAEELL----NRREETEWFIEGDFD----LYVTRMQKPCVWGGEPEILMAS 53
           E ADELR  V E +     +R+   E  I    D     Y  R+ +P  WGGE E+L+ S
Sbjct: 112 ENADELRMAVKEAICENVGDRKLYEEAIIAVTVDEPLQRYCRRIGQPDFWGGESELLVLS 171

Query: 54  HVLKTPISVFMRDTS------STEIVNIAKYGEEYRNGKD-ISINVLFHGYGHYEIL 103
            + K PI V++ +         +  + IA+YG E++ G    ++ +LF G  HY++L
Sbjct: 172 KLCKQPIIVYIPEHEHRGGGWGSGFIPIAEYGSEFKKGSSRKAVRLLFSGKNHYDLL 228