Miyakogusa Predicted Gene

Lj5g3v1749250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1749250.1 Non Characterized Hit- tr|G7JT65|G7JT65_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,81.05,0,RmlC-like cupins,RmlC-like cupin domain; no
description,RmlC-like jelly roll fold; Cupin_5,Protein o,CUFF.55922.1
         (193 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g125100.1 | cupin family protein | HC | chr4:51853838-5185...   326   8e-90

>Medtr4g125100.1 | cupin family protein | HC |
           chr4:51853838-51855907 | 20130731
          Length = 190

 Score =  326 bits (836), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 153/190 (80%), Positives = 167/190 (87%)

Query: 1   MSLSASEIAAKLNLQPHPEGGFYAETFRDHSVHLSTSHLPPQYKVDRPVSTAIYFLLSSG 60
           MSLSASEIA KLNLQPHPEGGFY ETFRDHSV LSTSHLP +YKVDRPVST IYFLL SG
Sbjct: 1   MSLSASEIAQKLNLQPHPEGGFYIETFRDHSVQLSTSHLPSEYKVDRPVSTCIYFLLPSG 60

Query: 61  NLSRLHRIPCAETWHHYIGESITVVELNEQDSTVKFTRLGSDLADNQTPQYSVPPNIWFG 120
            +SRLHRIP +ETWHHYIGE ITVVELNE+DS+VKFT LGSDL  +QTPQY+VPPN+WFG
Sbjct: 61  TMSRLHRIPSSETWHHYIGEPITVVELNEKDSSVKFTCLGSDLTKDQTPQYTVPPNVWFG 120

Query: 121 SFPTKDFTISADGGGFVNTPPRDAETHYSLVGCTCAPGFQFNDFELAKRSELVSRFPQLE 180
           SFPT DF +SA+GG FV    RD ETHYSLVGCTCAPGFQF DFELAKRS L+SRFPQLE
Sbjct: 121 SFPTSDFAVSANGGSFVKGSERDGETHYSLVGCTCAPGFQFQDFELAKRSYLISRFPQLE 180

Query: 181 ALITALTFPD 190
           +L+T LTFP+
Sbjct: 181 SLVTTLTFPE 190