Miyakogusa Predicted Gene

Lj5g3v1699200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1699200.1 Non Characterized Hit- tr|I1LCN7|I1LCN7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8642
PE=,97.05,0,COATOMER ALPHA SUBUNIT,NULL; COATOMER,NULL;
Coatomer_WDAD,Coatomer, WD associated
region,NODE_57458_length_931_cov_287.438232.path2.1
         (237 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g090827.1 | coatomer subunit alpha-like protein | HC | chr...   469   e-132
Medtr4g071130.1 | coatomer subunit alpha-like protein | HC | chr...   465   e-131
Medtr4g011950.1 | coatomer subunit beta-like protein | HC | chr4...    58   8e-09
Medtr4g006350.1 | coatomer WD associated domain protein | LC | c...    57   2e-08
Medtr2g102277.4 | coatomer subunit beta-like protein | HC | chr2...    52   4e-07
Medtr2g102277.1 | coatomer subunit beta-like protein | HC | chr2...    52   4e-07
Medtr2g102277.2 | coatomer subunit beta-like protein | HC | chr2...    52   4e-07
Medtr2g102277.3 | coatomer subunit beta-like protein | HC | chr2...    52   4e-07

>Medtr1g090827.1 | coatomer subunit alpha-like protein | HC |
           chr1:40855860-40850967 | 20130731
          Length = 1216

 Score =  469 bits (1206), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 223/236 (94%), Positives = 230/236 (97%)

Query: 2   ENVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDNGI 61
           E+VALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDNGI
Sbjct: 502 EHVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDNGI 561

Query: 62  IKTLDIPIYITKVSGNTIFCLDRDGKSRTIIIDATEYIFKLSLLKKRYDHVMNMIRNSQL 121
           IKTLD+PIYITKVS N IFCLDRDGKSR I IDATEYIFKLSL KK+YDHVMNMIRNSQL
Sbjct: 562 IKTLDVPIYITKVSANIIFCLDRDGKSRVITIDATEYIFKLSLFKKKYDHVMNMIRNSQL 621

Query: 122 CGQAMIAYLQQKGFPEVALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVE 181
           CGQAMIAYLQQKGFPEVALHFVKDE+IRFNLA+ESGNIQIAVASATAIDEKD+WYRLGVE
Sbjct: 622 CGQAMIAYLQQKGFPEVALHFVKDEKIRFNLAIESGNIQIAVASATAIDEKDYWYRLGVE 681

Query: 182 ALRQGNAGIVEYAYQRTKNFERLSFLYLITGNKEKLSKMLKIAEVKNDVMGQFHNA 237
           ALRQGNAGIVEYAYQRTKNFERLSFLYL+TGN EKLSKMLKIAEVKNDVMGQFHNA
Sbjct: 682 ALRQGNAGIVEYAYQRTKNFERLSFLYLVTGNLEKLSKMLKIAEVKNDVMGQFHNA 737


>Medtr4g071130.1 | coatomer subunit alpha-like protein | HC |
           chr4:26807943-26801111 | 20130731
          Length = 1206

 Score =  465 bits (1196), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 220/236 (93%), Positives = 231/236 (97%)

Query: 2   ENVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDNGI 61
           ++VALLSKHAI+IASKKLVHQCTLHETIRVKSGAWDDNG+FIYTTLNHIKYCLPNGD+GI
Sbjct: 508 DSVALLSKHAIVIASKKLVHQCTLHETIRVKSGAWDDNGIFIYTTLNHIKYCLPNGDSGI 567

Query: 62  IKTLDIPIYITKVSGNTIFCLDRDGKSRTIIIDATEYIFKLSLLKKRYDHVMNMIRNSQL 121
           IKTLD+PIYITKV GNTIFCL RDGK++ I IDATEYIFKLSLLKKRYDHVMNMI+NSQL
Sbjct: 568 IKTLDVPIYITKVVGNTIFCLGRDGKNKAITIDATEYIFKLSLLKKRYDHVMNMIKNSQL 627

Query: 122 CGQAMIAYLQQKGFPEVALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVE 181
           CGQAMIAYLQQKGFPEVALHFVKDERIRFNLA+ESGNIQIAVASATAIDEKDHWY+LGVE
Sbjct: 628 CGQAMIAYLQQKGFPEVALHFVKDERIRFNLAIESGNIQIAVASATAIDEKDHWYQLGVE 687

Query: 182 ALRQGNAGIVEYAYQRTKNFERLSFLYLITGNKEKLSKMLKIAEVKNDVMGQFHNA 237
           ALRQGNAGIVEYAYQRTKNFERLSFLYLITGN EKLSKMLKIAEVKNDVMGQFHNA
Sbjct: 688 ALRQGNAGIVEYAYQRTKNFERLSFLYLITGNVEKLSKMLKIAEVKNDVMGQFHNA 743


>Medtr4g011950.1 | coatomer subunit beta-like protein | HC |
           chr4:3146350-3132249 | 20130731
          Length = 931

 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 17/217 (7%)

Query: 25  LHE-TIRVKSGAWDDNGVFIYTTLN-HIKYCLPNGDNGIIKTLDIPIYITK--VSGNTIF 80
           LHE + RV++G W  +  FIYT  +  + YC+  G+   +  LD P+Y+     S + ++
Sbjct: 518 LHEMSERVRTGIWVGD-CFIYTNSSWRLNYCV-GGEVTTMFHLDRPMYLLGYLASQSRVY 575

Query: 81  CLDRDGK--SRTIIIDATEYIFKLSLLK---KRYDHVMNMIRNSQLCGQAMIAYLQQKGF 135
            +D++      T+++   EY  K  +++   +R + ++  I        ++  +L+ +G 
Sbjct: 576 LIDKEFNVVGYTLLLSLIEY--KTLVMRGDLERANEILPSIPKEH--HNSVAHFLESRGM 631

Query: 136 PEVALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAY 195
            E AL    D   RF+LA++ G +++A   A  +  +  W +LG  A+  GN  + E   
Sbjct: 632 IEDALEVATDPEYRFDLAIQLGRLEVAKDIAVEVKSESKWKQLGELAMSTGNFEMAEECL 691

Query: 196 QRTKNFERLSFLYLITGNKEKLSKMLKIA--EVKNDV 230
           +   +   L  LY   G+ E +SK+  +A  + KN+V
Sbjct: 692 KHAMDLSGLLLLYSSIGDAEGISKLATLAKEQGKNNV 728


>Medtr4g006350.1 | coatomer WD associated domain protein | LC |
           chr4:602087-608877 | 20130731
          Length = 900

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 24/215 (11%)

Query: 25  LHE-TIRVKSGAWDDNGVFIYTTLN-HIKYCLPNGDN-GIIKTLDIPIYITK--VSGNTI 79
           LHE + RV+ G W ++  FIYT  +  + YC+  GD    I  LD P+Y+     S + +
Sbjct: 210 LHEISERVRRGIWVED-CFIYTNSSWRLNYCV--GDEVTTIFHLDRPMYLLGYLASQDRV 266

Query: 80  FCLDRDG---KSRTIIIDATEYIFKLSLLKKRYDHVMNMIRNSQLCGQAMIAYLQQKGFP 136
           + +D D    K ++++I       K  L     +H  +++R           +L+ +G  
Sbjct: 267 YLIDSDFNLIKYKSLVIRGDFERAKEILPSIPKEHHNSVLR-----------FLESRGMI 315

Query: 137 EVALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQ 196
           E AL+   D   RF LA++ G +++A   A  +     W +LG  A+  G   + E   +
Sbjct: 316 EDALNLATDPEYRFGLAIQHGRLEVAKDVALELKSISKWKQLGELAMSNGKLEMAEECLE 375

Query: 197 RTKNFERLSFLYLITGNKEKLSKMLKIAEV--KND 229
              +F  L  L+  T +   +SK+  +A+   KND
Sbjct: 376 HAMDFHGLLLLHSSTVDIRGMSKLATLAKEHGKND 410


>Medtr2g102277.4 | coatomer subunit beta-like protein | HC |
           chr2:44045802-44056312 | 20130731
          Length = 917

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 13/215 (6%)

Query: 25  LHE-TIRVKSGAWDDNGVFIYTTLN-HIKYCLPNGDNGIIKTLDIPIYITKVSGNT--IF 80
           LHE   RV++G W  +  FIY   +  + YC+  G+   +  LD P+Y+     N   +F
Sbjct: 518 LHEMNERVRTGIWVGD-CFIYNNSSWRLNYCV-GGEVTTMFHLDRPMYLLGYLANQSRVF 575

Query: 81  CLDRDGK--SRTIIIDATEYIFKLSLLKKRYDHVMNMIRNSQLCGQAMIA-YLQQKGFPE 137
            +D++      T+++   EY  K  +++   +    ++ +        +A +L+ +G  E
Sbjct: 576 LIDKEFNVVGYTLLLSLIEY--KTLVMRGDLESANEVLPSIPKEHHNSVARFLESRGMIE 633

Query: 138 VALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQR 197
            AL    D   RF+LA++ G +++A   A  +  +  W +LG  A+  G   + E     
Sbjct: 634 DALEVATDPDYRFDLAIQLGRLEVAKGIAIEVQSESKWKQLGELAMSSGKLQMAEECLNH 693

Query: 198 TKNFERLSFLYLITGNKEKLSKMLKIA--EVKNDV 230
             +   L  LY   G+ E +SK+  +A  + KN+V
Sbjct: 694 AMDLSGLLLLYSSFGDAEGISKLATLAKEQGKNNV 728


>Medtr2g102277.1 | coatomer subunit beta-like protein | HC |
           chr2:44045802-44056791 | 20130731
          Length = 917

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 13/215 (6%)

Query: 25  LHE-TIRVKSGAWDDNGVFIYTTLN-HIKYCLPNGDNGIIKTLDIPIYITKVSGNT--IF 80
           LHE   RV++G W  +  FIY   +  + YC+  G+   +  LD P+Y+     N   +F
Sbjct: 518 LHEMNERVRTGIWVGD-CFIYNNSSWRLNYCV-GGEVTTMFHLDRPMYLLGYLANQSRVF 575

Query: 81  CLDRDGK--SRTIIIDATEYIFKLSLLKKRYDHVMNMIRNSQLCGQAMIA-YLQQKGFPE 137
            +D++      T+++   EY  K  +++   +    ++ +        +A +L+ +G  E
Sbjct: 576 LIDKEFNVVGYTLLLSLIEY--KTLVMRGDLESANEVLPSIPKEHHNSVARFLESRGMIE 633

Query: 138 VALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQR 197
            AL    D   RF+LA++ G +++A   A  +  +  W +LG  A+  G   + E     
Sbjct: 634 DALEVATDPDYRFDLAIQLGRLEVAKGIAIEVQSESKWKQLGELAMSSGKLQMAEECLNH 693

Query: 198 TKNFERLSFLYLITGNKEKLSKMLKIA--EVKNDV 230
             +   L  LY   G+ E +SK+  +A  + KN+V
Sbjct: 694 AMDLSGLLLLYSSFGDAEGISKLATLAKEQGKNNV 728


>Medtr2g102277.2 | coatomer subunit beta-like protein | HC |
           chr2:44045802-44056791 | 20130731
          Length = 921

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 13/215 (6%)

Query: 25  LHE-TIRVKSGAWDDNGVFIYTTLN-HIKYCLPNGDNGIIKTLDIPIYITKVSGNT--IF 80
           LHE   RV++G W  +  FIY   +  + YC+  G+   +  LD P+Y+     N   +F
Sbjct: 518 LHEMNERVRTGIWVGD-CFIYNNSSWRLNYCV-GGEVTTMFHLDRPMYLLGYLANQSRVF 575

Query: 81  CLDRDGK--SRTIIIDATEYIFKLSLLKKRYDHVMNMIRNSQLCGQAMIA-YLQQKGFPE 137
            +D++      T+++   EY  K  +++   +    ++ +        +A +L+ +G  E
Sbjct: 576 LIDKEFNVVGYTLLLSLIEY--KTLVMRGDLESANEVLPSIPKEHHNSVARFLESRGMIE 633

Query: 138 VALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQR 197
            AL    D   RF+LA++ G +++A   A  +  +  W +LG  A+  G   + E     
Sbjct: 634 DALEVATDPDYRFDLAIQLGRLEVAKGIAIEVQSESKWKQLGELAMSSGKLQMAEECLNH 693

Query: 198 TKNFERLSFLYLITGNKEKLSKMLKIA--EVKNDV 230
             +   L  LY   G+ E +SK+  +A  + KN+V
Sbjct: 694 AMDLSGLLLLYSSFGDAEGISKLATLAKEQGKNNV 728


>Medtr2g102277.3 | coatomer subunit beta-like protein | HC |
           chr2:44045802-44056785 | 20130731
          Length = 921

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 13/215 (6%)

Query: 25  LHE-TIRVKSGAWDDNGVFIYTTLN-HIKYCLPNGDNGIIKTLDIPIYITKVSGNT--IF 80
           LHE   RV++G W  +  FIY   +  + YC+  G+   +  LD P+Y+     N   +F
Sbjct: 518 LHEMNERVRTGIWVGD-CFIYNNSSWRLNYCV-GGEVTTMFHLDRPMYLLGYLANQSRVF 575

Query: 81  CLDRDGK--SRTIIIDATEYIFKLSLLKKRYDHVMNMIRNSQLCGQAMIA-YLQQKGFPE 137
            +D++      T+++   EY  K  +++   +    ++ +        +A +L+ +G  E
Sbjct: 576 LIDKEFNVVGYTLLLSLIEY--KTLVMRGDLESANEVLPSIPKEHHNSVARFLESRGMIE 633

Query: 138 VALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQR 197
            AL    D   RF+LA++ G +++A   A  +  +  W +LG  A+  G   + E     
Sbjct: 634 DALEVATDPDYRFDLAIQLGRLEVAKGIAIEVQSESKWKQLGELAMSSGKLQMAEECLNH 693

Query: 198 TKNFERLSFLYLITGNKEKLSKMLKIA--EVKNDV 230
             +   L  LY   G+ E +SK+  +A  + KN+V
Sbjct: 694 AMDLSGLLLLYSSFGDAEGISKLATLAKEQGKNNV 728