Miyakogusa Predicted Gene

Lj5g3v1699010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1699010.1 Non Characterized Hit- tr|I1LCM6|I1LCM6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55222
PE,85.77,0,SUBFAMILY NOT NAMED,NULL; MALATE DEHYDROGENASE,Malate
dehydrogenase, type 2; NAD(P)-binding
Rossmann,NODE_34460_length_747_cov_364.220886.path1.1
         (239 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g090730.2 | NADP-dependent malate dehydrogenase | HC | chr...   388   e-108
Medtr1g090730.1 | NADP-dependent malate dehydrogenase | HC | chr...   386   e-108
Medtr8g005980.1 | cytoplasmic-like malate dehydrogenase | HC | c...   123   1e-28
Medtr1g043040.1 | cytoplasmic-like malate dehydrogenase | HC | c...   113   2e-25
Medtr1g076130.1 | cytoplasmic-like malate dehydrogenase | HC | c...   112   3e-25

>Medtr1g090730.2 | NADP-dependent malate dehydrogenase | HC |
           chr1:40748575-40744691 | 20130731
          Length = 408

 Score =  388 bits (997), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 188/210 (89%), Positives = 194/210 (92%)

Query: 30  HRHCAFALPQRTQHASISCSVAPNEVQVPAVQTLDSKGKPECYGVFCLTYDLKAEEETVS 89
           H HC  A  +RTQHA ISCSVAPN+VQVPAVQT D K KP+CYGVFCLTYDLKAEEET S
Sbjct: 31  HHHCTLAPLRRTQHARISCSVAPNQVQVPAVQTQDPKNKPDCYGVFCLTYDLKAEEETKS 90

Query: 90  WKKLINIAVSGAAGMISNHLLFKLASGEVFGPNQPIALKLLGSERSFQALEGVAMELEDS 149
           WKKLI IAVSGAAGMISNHLLFKLASGEVFGPNQP+ALKLLGSERS QALEGVAMELEDS
Sbjct: 91  WKKLITIAVSGAAGMISNHLLFKLASGEVFGPNQPVALKLLGSERSLQALEGVAMELEDS 150

Query: 150 LFPLLREVSIGIDSYEVFQDADWALLIGAKPRGPGMERADLLDINGKIFAEQGKALNAVA 209
           LFPLLREV I ID YEVFQDADWALLIGAKPRGPG+ERA LLDING+IFAEQGKALNAVA
Sbjct: 151 LFPLLREVIISIDPYEVFQDADWALLIGAKPRGPGVERAALLDINGQIFAEQGKALNAVA 210

Query: 210 SRNVKVIVVGNPCNTNALICLKNAPNIPAK 239
           SRNVKVIVVGNPCNTNALICLKNAPNIPAK
Sbjct: 211 SRNVKVIVVGNPCNTNALICLKNAPNIPAK 240


>Medtr1g090730.1 | NADP-dependent malate dehydrogenase | HC |
           chr1:40748776-40743707 | 20130731
          Length = 437

 Score =  386 bits (992), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 188/210 (89%), Positives = 194/210 (92%)

Query: 30  HRHCAFALPQRTQHASISCSVAPNEVQVPAVQTLDSKGKPECYGVFCLTYDLKAEEETVS 89
           H HC  A  +RTQHA ISCSVAPN+VQVPAVQT D K KP+CYGVFCLTYDLKAEEET S
Sbjct: 31  HHHCTLAPLRRTQHARISCSVAPNQVQVPAVQTQDPKNKPDCYGVFCLTYDLKAEEETKS 90

Query: 90  WKKLINIAVSGAAGMISNHLLFKLASGEVFGPNQPIALKLLGSERSFQALEGVAMELEDS 149
           WKKLI IAVSGAAGMISNHLLFKLASGEVFGPNQP+ALKLLGSERS QALEGVAMELEDS
Sbjct: 91  WKKLITIAVSGAAGMISNHLLFKLASGEVFGPNQPVALKLLGSERSLQALEGVAMELEDS 150

Query: 150 LFPLLREVSIGIDSYEVFQDADWALLIGAKPRGPGMERADLLDINGKIFAEQGKALNAVA 209
           LFPLLREV I ID YEVFQDADWALLIGAKPRGPG+ERA LLDING+IFAEQGKALNAVA
Sbjct: 151 LFPLLREVIISIDPYEVFQDADWALLIGAKPRGPGVERAALLDINGQIFAEQGKALNAVA 210

Query: 210 SRNVKVIVVGNPCNTNALICLKNAPNIPAK 239
           SRNVKVIVVGNPCNTNALICLKNAPNIPAK
Sbjct: 211 SRNVKVIVVGNPCNTNALICLKNAPNIPAK 240


>Medtr8g005980.1 | cytoplasmic-like malate dehydrogenase | HC |
           chr8:430275-432634 | 20130731
          Length = 413

 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 96/159 (60%), Gaps = 6/159 (3%)

Query: 81  LKAEEETVSWKKLINIAVSGAAGMISNHLLFKLASGEVFGPNQPIALKLLGSERSFQALE 140
           LK E+E V+      + V+GAAG I   L+  +A G + GPNQP+ L +L  E + +AL+
Sbjct: 81  LKVEKEPVT------VLVTGAAGQIGYALVPMIARGMMLGPNQPVILHMLDIEPALEALK 134

Query: 141 GVAMELEDSLFPLLREVSIGIDSYEVFQDADWALLIGAKPRGPGMERADLLDINGKIFAE 200
           GV MEL D+ FPLLR V    D  E  +D + A+++G  PR  GMER D++  N  I+  
Sbjct: 135 GVKMELIDAAFPLLRGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKT 194

Query: 201 QGKALNAVASRNVKVIVVGNPCNTNALICLKNAPNIPAK 239
           Q  AL   A+   KV+V+ NP NTNALI  + AP+IP K
Sbjct: 195 QASALEEHAAAYCKVLVIANPANTNALILKEFAPSIPEK 233


>Medtr1g043040.1 | cytoplasmic-like malate dehydrogenase | HC |
           chr1:16122538-16117304 | 20130731
          Length = 332

 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 88/149 (59%)

Query: 91  KKLINIAVSGAAGMISNHLLFKLASGEVFGPNQPIALKLLGSERSFQALEGVAMELEDSL 150
           K  + + V+GAAG I   L+  +A G + GP+QP+ L +L    + ++L GV MEL D+ 
Sbjct: 3   KDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIAPAAESLNGVKMELVDAA 62

Query: 151 FPLLREVSIGIDSYEVFQDADWALLIGAKPRGPGMERADLLDINGKIFAEQGKALNAVAS 210
           FPLL+ V    D  E     + A+++G  PR  GMER D++  N  I+  Q  AL   A+
Sbjct: 63  FPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAA 122

Query: 211 RNVKVIVVGNPCNTNALICLKNAPNIPAK 239
            N KV+VV NP NTNALI  + AP+IP +
Sbjct: 123 ANCKVLVVANPANTNALILKEFAPSIPER 151


>Medtr1g076130.1 | cytoplasmic-like malate dehydrogenase | HC |
           chr1:33721743-33725370 | 20130731
          Length = 332

 Score =  112 bits (280), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 88/149 (59%)

Query: 91  KKLINIAVSGAAGMISNHLLFKLASGEVFGPNQPIALKLLGSERSFQALEGVAMELEDSL 150
           K  + + V+GAAG I   L+  +A G + GP+QP+ L +L    + ++L GV MEL D+ 
Sbjct: 3   KDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVDAA 62

Query: 151 FPLLREVSIGIDSYEVFQDADWALLIGAKPRGPGMERADLLDINGKIFAEQGKALNAVAS 210
           FPLL+ V    D  E     + A+++G  PR  GMER D++  N  I+  Q  AL   A+
Sbjct: 63  FPLLKGVVATTDVVEGCTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKHAA 122

Query: 211 RNVKVIVVGNPCNTNALICLKNAPNIPAK 239
            N KV+VV NP NTNALI  + AP+IP K
Sbjct: 123 ANCKVLVVANPANTNALILKEFAPSIPEK 151