Miyakogusa Predicted Gene

Lj5g3v1697380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1697380.1 Non Characterized Hit- tr|I1NHV4|I1NHV4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45853 PE,93.67,0,no
description,Six-bladed beta-propeller, TolB-like; no
description,WD40/YVTN repeat-like-containing,CUFF.55747.1
         (458 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g090310.1 | transducin/WD-like repeat-protein | HC | chr1:...   880   0.0  

>Medtr1g090310.1 | transducin/WD-like repeat-protein | HC |
           chr1:40460575-40454850 | 20130731
          Length = 458

 Score =  880 bits (2274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/458 (91%), Positives = 439/458 (95%)

Query: 1   MEFTESYKQTGPCCFSPNARFIAVAVDYRLVIRETLSFKVVQLFSCLDKISYIEWALDSE 60
           MEFTE YKQTGP  FSPNARF+AVAVDYRLVIR+TLSFKVVQLFSCLDKISYIEWALDSE
Sbjct: 1   MEFTECYKQTGPSSFSPNARFLAVAVDYRLVIRDTLSFKVVQLFSCLDKISYIEWALDSE 60

Query: 61  YILCGLYKRPMIQAWSLAQPEWTCKIDEGPAGIAYARWSPDSRHILTTSDFQLRLTVWSL 120
           YILCGLYK+PMIQAWSL QPEWTCKIDEGPAGIAYARWSPDSRHILTTSDFQLRLTVWSL
Sbjct: 61  YILCGLYKKPMIQAWSLTQPEWTCKIDEGPAGIAYARWSPDSRHILTTSDFQLRLTVWSL 120

Query: 121 VNTACVHVQLPKHASKGVSFTRDGKFAAICTRRDCKDYINLVSCHTWEIMGLFAVDTLDL 180
           VNTACVH+QLPKHASKGVSFTRDGKFAAICTRRDCKD+INL+SCH+WEIMGLF VDTLDL
Sbjct: 121 VNTACVHLQLPKHASKGVSFTRDGKFAAICTRRDCKDHINLLSCHSWEIMGLFPVDTLDL 180

Query: 181 ADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLFKYQAYESGLGVKSVSWSPCGQFLAVG 240
           AD+EWSPDDS+IVIWDSPL+YKVLIYSPDGRCLFKYQAYESGLGVKSVSWSPCGQFLAVG
Sbjct: 181 ADVEWSPDDSSIVIWDSPLDYKVLIYSPDGRCLFKYQAYESGLGVKSVSWSPCGQFLAVG 240

Query: 241 SYDQMLRVLNHLTWKTFAEFMHLSTVRGPGYAAVFKEVDEPLQLDMSELCLSDDFPQGND 300
           SYDQMLRVLNHLTWKTFAEF+H   VRGP YAAVFKEVDEPLQLDMSELCLSDDF QGN 
Sbjct: 241 SYDQMLRVLNHLTWKTFAEFLHPYAVRGPCYAAVFKEVDEPLQLDMSELCLSDDFSQGNI 300

Query: 301 DSPEEPFRVRYEVTEIPINLPFQKPPAEKPNPKQGIGILSWSSDSQYICTRNDSMPTVLW 360
           DSPE PFRVRYEV E+PINLPFQKPPAEKPNPKQGIG LSWS+DSQYICTRNDSMPTVLW
Sbjct: 301 DSPERPFRVRYEVMEVPINLPFQKPPAEKPNPKQGIGFLSWSNDSQYICTRNDSMPTVLW 360

Query: 361 IWDVRHLEVAAILVQKDPIRAAAWDPTSARLVLCTGSTHLYMWTPSGAYCVHVPLPQFNI 420
           +W++R LE+ AILVQKDPIR AAWDPTS RLV CTGSTHLYMWTPSGA+CVHVPLPQF+I
Sbjct: 361 VWNIRQLELTAILVQKDPIRVAAWDPTSTRLVFCTGSTHLYMWTPSGAFCVHVPLPQFSI 420

Query: 421 TDLKWNSDGSCLLLKDKESFCCAAVPLLPESSEYSSDE 458
           TDLKWNSDGSCLLLKDKE+FCCAAVPLLPESSEYSSDE
Sbjct: 421 TDLKWNSDGSCLLLKDKETFCCAAVPLLPESSEYSSDE 458