Miyakogusa Predicted Gene

Lj5g3v1696940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1696940.1 Non Characterized Hit- tr|A5BZZ0|A5BZZ0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,58.23,1e-17,seg,NULL,CUFF.55733.1
         (241 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g090010.1 | hypothetical protein | HC | chr1:40304990-4030...   264   6e-71
Medtr6g023085.1 | hypothetical protein | HC | chr6:8048373-80480...   104   6e-23

>Medtr1g090010.1 | hypothetical protein | HC |
           chr1:40304990-40301831 | 20130731
          Length = 230

 Score =  264 bits (674), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 143/230 (62%), Positives = 160/230 (69%), Gaps = 15/230 (6%)

Query: 15  IRVFGQRSVASTFHSINARDSEPAVRNQASRKNDSARASLSHFLDRKLPKSPLPPQTVPR 74
           +R FGQRS+ STF ++      P   NQ S K +S R  LSHFLDRKL KS      VP 
Sbjct: 13  VRAFGQRSITSTFRTL------PPNSNQPSTKTESPRLLLSHFLDRKLHKSSPITHKVPG 66

Query: 75  KSTPFASPLGLRIPLGEHSGNVKQHEGERNGAGDDDKVIFERFKHTXXXXXXXXXXXDLV 134
           KSTPFASPLGLR+P  +  GNVKQ E ER GA  DDKVI E FKHT           D V
Sbjct: 67  KSTPFASPLGLRVPTRDEVGNVKQIEEERKGATTDDKVILEMFKHT-----EEDGKNDFV 121

Query: 135 SPFGVDEMENPVVDDIQELRKRKNPFEGGNENQ---KHVVVLGGESKLKPKGQMGKDSSN 191
            P  VDE+EN V DD+QE +KRKNPFEG +ENQ   KHVVVLGGES+LKPK +   DS+ 
Sbjct: 122 IPVDVDELENSVADDVQESKKRKNPFEGRHENQTVRKHVVVLGGESRLKPKKRTENDSNG 181

Query: 192 KKPRPLYNHYANGRGWWDHDMEGVDNEALGFTEVWEGVGSTTLGGIVDWH 241
            K +P YNHYANGRGWWD+DMEGVDNE LG +E WEGVGSTTLGGIVDWH
Sbjct: 182 IKQKP-YNHYANGRGWWDYDMEGVDNEELGASEAWEGVGSTTLGGIVDWH 230


>Medtr6g023085.1 | hypothetical protein | HC | chr6:8048373-8048008
           | 20130731
          Length = 121

 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/102 (56%), Positives = 65/102 (63%), Gaps = 8/102 (7%)

Query: 75  KSTPFASPLGLRIPLGEHSGNVKQHEGERNGAGDDDKVIFERFKHTXXXXXXXXXXXDLV 134
           KSTPFASPLGLR+P  +  G+VKQ E +  GA  DDKVI E FKHT           D V
Sbjct: 20  KSTPFASPLGLRVPTSDEVGSVKQIEEDIKGATTDDKVILEMFKHT-----EEDRNNDFV 74

Query: 135 SPFGVDEMENPVVDDIQELRKRKNPFEGGNENQ---KHVVVL 173
            P  VDE+EN V DD+QE R RK PFEG +ENQ   KHVV L
Sbjct: 75  IPLDVDELENSVADDVQESRNRKTPFEGVHENQTVRKHVVFL 116